RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 RPUSD4Q96CM3 377 aaKnown RBP6.78□□□□□ -1.32
CLN6-203ENST00000563917 C16orf74Q96GX8 76 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 UHRF2Q96PU4 802 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 SLC50A1Q9BRV3 221 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 GGACTQ9BVM4 153 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 TRAV12-2A0A075B6T6 113 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 A0A087X0K7 114 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 TRAV8-2A0A0B4J237 113 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 RTL8CO15255 209 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 NUDT3O95989 172 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 MED14OSP0DP75 135 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 PVALBP20472 110 aaPredicted RBP6.77□□□□□ -1.33
CLN6-203ENST00000563917 CDKN1BP46527 198 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 BCAP31P51572 246 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 CCL18P55774 89 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 SLC38A11Q08AI6 406 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 CLINT1Q14677 625 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 TMEM14EPQ6UXP3 125 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 ZNF493Q6ZR52 646 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 Q6ZRG5 221 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 LINC00305Q7Z4B0 112 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 CCDC28AQ8IWP9 274 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 ZBTB8BQ8NAP8 495 aaPredicted RBP6.77□□□□□ -1.33
CLN6-203ENST00000563917 OR10J6PQ8NGY7 276 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 FLVCR2Q9UPI3 526 aa6.77□□□□□ -1.33
CLN6-203ENST00000563917 TIMM8BQ9Y5J9 83 aaPredicted RBP6.77□□□□□ -1.33
CLN6-203ENST00000563917 CBY3A6NI87 242 aa6.76□□□□□ -1.33
CLN6-203ENST00000563917 PMS2P5A8MQ11 134 aa6.76□□□□□ -1.33
CLN6-203ENST00000563917 FAM25EA8MYX2 175 aa6.76□□□□□ -1.33
CLN6-203ENST00000563917 H7BYZ3 331 aa6.76□□□□□ -1.33
CLN6-203ENST00000563917 K7EPK0 472 aa6.76□□□□□ -1.33
CLN6-203ENST00000563917 CRXO43186 299 aaPredicted RBP6.76□□□□□ -1.33
CLN6-203ENST00000563917 BAK1Q16611 211 aa6.76□□□□□ -1.33
CLN6-203ENST00000563917 C10orf113Q5VZT2 155 aa6.76□□□□□ -1.33
CLN6-203ENST00000563917 C20orf144Q9BQM9 153 aa6.76□□□□□ -1.33
CLN6-203ENST00000563917 FRAS1Q86XX4 4008 aa6.76□□□□□ -1.33
CLN6-203ENST00000563917 A0A1B0GVY2 172 aa6.75□□□□□ -1.33
CLN6-203ENST00000563917 C5orf51A6NDU8 294 aa6.75□□□□□ -1.33
CLN6-203ENST00000563917 AGPAT2O15120 278 aa6.75□□□□□ -1.33
CLN6-203ENST00000563917 CCNKO75909 580 aa6.75□□□□□ -1.33
CLN6-203ENST00000563917 CAMLGP49069 296 aa6.75□□□□□ -1.33
CLN6-203ENST00000563917 CAV2P51636 162 aa6.75□□□□□ -1.33
CLN6-203ENST00000563917 Q6ZR54 194 aa6.75□□□□□ -1.33
CLN6-203ENST00000563917 C12orf45Q8N5I9 185 aaPredicted RBP6.75□□□□□ -1.33
CLN6-203ENST00000563917 OR1L4Q8NGR5 311 aa6.75□□□□□ -1.33
CLN6-203ENST00000563917 TMEM263Q8WUH6 116 aaKnown RBP6.75□□□□□ -1.33
CLN6-203ENST00000563917 MITD1Q8WV92 249 aa6.75□□□□□ -1.33
CLN6-203ENST00000563917 C17orf77Q96MU5 243 aa6.75□□□□□ -1.33
CLN6-203ENST00000563917 RCL1Q9Y2P8 373 aaKnown RBP6.75□□□□□ -1.33
CLN6-203ENST00000563917 PXMP4Q9Y6I8 212 aa6.75□□□□□ -1.33
CLN6-203ENST00000563917 VPS13DQ5THJ4 4388 aa6.74□□□□□ -1.33
CLN6-203ENST00000563917 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
CLN6-203ENST00000563917 C7orf66A4D0T2 115 aa6.74□□□□□ -1.33
CLN6-203ENST00000563917 SNURFLB1AK76 121 aa6.74□□□□□ -1.33
CLN6-203ENST00000563917 PRM2P04554 102 aa6.74□□□□□ -1.33
CLN6-203ENST00000563917 IL7P13232 177 aa6.74□□□□□ -1.33
CLN6-203ENST00000563917 AZU1P20160 251 aa6.74□□□□□ -1.33
CLN6-203ENST00000563917 GUK1Q16774 197 aa6.74□□□□□ -1.33
CLN6-203ENST00000563917 PFDN5Q99471 154 aa6.74□□□□□ -1.33
CLN6-203ENST00000563917 C20orf85Q9H1P6 137 aa6.74□□□□□ -1.33
CLN6-203ENST00000563917 DNAJC4Q9NNZ3 241 aa6.74□□□□□ -1.33
CLN6-203ENST00000563917 NOP10Q9NPE3 64 aaKnown RBP6.74□□□□□ -1.33
CLN6-203ENST00000563917 ZNF331Q9NQX6 463 aaPredicted RBP6.74□□□□□ -1.33
CLN6-203ENST00000563917 LSM5Q9Y4Y9 91 aaKnown RBP6.74□□□□□ -1.33
CLN6-203ENST00000563917 MBPP02686 304 aaPredicted RBP6.73□□□□□ -1.33
CLN6-203ENST00000563917 RLN2P04090 185 aa6.73□□□□□ -1.33
CLN6-203ENST00000563917 SNRPCP09234 159 aaKnown RBP6.73□□□□□ -1.33
CLN6-203ENST00000563917 LEPP41159 167 aa6.73□□□□□ -1.33
CLN6-203ENST00000563917 HBG1P69891 147 aa6.73□□□□□ -1.33
CLN6-203ENST00000563917 HBG2P69892 147 aa6.73□□□□□ -1.33
CLN6-203ENST00000563917 OR5I1Q13606 314 aa6.73□□□□□ -1.33
CLN6-203ENST00000563917 FCN2Q15485 313 aa6.73□□□□□ -1.33
CLN6-203ENST00000563917 PATE2Q6UY27 113 aa6.73□□□□□ -1.33
CLN6-203ENST00000563917 STX12Q86Y82 276 aa6.73□□□□□ -1.33
CLN6-203ENST00000563917 GNPNAT1Q96EK6 184 aaPredicted RBP6.73□□□□□ -1.33
CLN6-203ENST00000563917 KRTAP17-1Q9BYP8 105 aa6.73□□□□□ -1.33
CLN6-203ENST00000563917 RBM38Q9H0Z9 239 aaKnown RBP6.73□□□□□ -1.33
CLN6-203ENST00000563917 UQCC1Q9NVA1 299 aa6.73□□□□□ -1.33
CLN6-203ENST00000563917 TRAV6A0A075B6T7 132 aa6.72□□□□□ -1.33
CLN6-203ENST00000563917 NBDYA0A0U1RRE5 68 aa6.72□□□□□ -1.33
CLN6-203ENST00000563917 CCSO14618 274 aa6.72□□□□□ -1.33
CLN6-203ENST00000563917 LYRM1O43325 122 aa6.72□□□□□ -1.33
CLN6-203ENST00000563917 CST7O76096 145 aa6.72□□□□□ -1.33
CLN6-203ENST00000563917 S100A11P31949 105 aa6.72□□□□□ -1.33
CLN6-203ENST00000563917 S100A10P60903 97 aa6.72□□□□□ -1.33
CLN6-203ENST00000563917 BAXQ07812 192 aa6.72□□□□□ -1.33
CLN6-203ENST00000563917 NRARPQ7Z6K4 114 aa6.72□□□□□ -1.33
CLN6-203ENST00000563917 C6orf223Q8N319 242 aa6.72□□□□□ -1.33
CLN6-203ENST00000563917 ZNF431Q8TF32 576 aaPredicted RBP6.72□□□□□ -1.33
CLN6-203ENST00000563917 MGST2Q99735 147 aa6.72□□□□□ -1.33
CLN6-203ENST00000563917 H3BTX0 84 aa6.71□□□□□ -1.34
CLN6-203ENST00000563917 J3KRW8 73 aa6.71□□□□□ -1.34
CLN6-203ENST00000563917 MRPS12O15235 138 aaKnown RBP6.71□□□□□ -1.34
CLN6-203ENST00000563917 TCRBP04435 133 aa6.71□□□□□ -1.34
CLN6-203ENST00000563917 M6PRP20645 277 aa6.71□□□□□ -1.34
CLN6-203ENST00000563917 BTCP35070 178 aa6.71□□□□□ -1.34
CLN6-203ENST00000563917 ARL16Q0P5N6 197 aa6.71□□□□□ -1.34
CLN6-203ENST00000563917 OPCMLQ14982 345 aa6.71□□□□□ -1.34
CLN6-203ENST00000563917 ATP6V1FQ16864 119 aa6.71□□□□□ -1.34
CLN6-203ENST00000563917 TTC32Q5I0X7 151 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms