RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 C16orf54Q6UWD8 224 aa16.74■□□□□ 0.27
LINC01960-201ENST00000563759 SIGLEC15Q6ZMC9 328 aa16.74■□□□□ 0.27
LINC01960-201ENST00000563759 PARLQ9H300 379 aa16.74■□□□□ 0.27
LINC01960-201ENST00000563759 ZNF785A8K8V0 405 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 SLC17A3O00476 420 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 NDUFB4O95168 129 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 GLMPQ8WWB7 406 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 SMIM7Q9BQ49 75 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 ELOVL1Q9BW60 279 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 SMAD5-AS1Q9Y6J3 95 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 PGPA6NDG6 321 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 ZNF727A8MUV8 499 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 SLC25A5P05141 298 aaKnown RBP16.73■□□□□ 0.27
LINC01960-201ENST00000563759 GUCA2BQ16661 112 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 SVBPQ8N300 66 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.73■□□□□ 0.27
LINC01960-201ENST00000563759 NIPSNAP3BQ9BS92 247 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 RHPN1-AS1Q9BWJ2 59 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 OTORQ9NRC9 128 aa16.73■□□□□ 0.27
LINC01960-201ENST00000563759 TMEM213A2RRL7 107 aa16.72■□□□□ 0.27
LINC01960-201ENST00000563759 BMI1P35226 326 aa16.72■□□□□ 0.27
LINC01960-201ENST00000563759 MYCNOSP40205 109 aa16.72■□□□□ 0.27
LINC01960-201ENST00000563759 KLF5Q13887 457 aaPredicted RBP16.72■□□□□ 0.27
LINC01960-201ENST00000563759 EXOC3-AS1Q8N2X6 119 aa16.72■□□□□ 0.27
LINC01960-201ENST00000563759 C11orf52Q96A22 123 aa16.72■□□□□ 0.27
LINC01960-201ENST00000563759 SMPXQ9UHP9 88 aa16.72■□□□□ 0.27
LINC01960-201ENST00000563759 EDN2P20800 178 aa16.71■□□□□ 0.27
LINC01960-201ENST00000563759 TCEAL7Q9BRU2 100 aa16.71■□□□□ 0.27
LINC01960-201ENST00000563759 DERL1Q9BUN8 251 aa16.71■□□□□ 0.27
LINC01960-201ENST00000563759 AAMDCQ9H7C9 122 aa16.71■□□□□ 0.27
LINC01960-201ENST00000563759 RPH3ALQ9UNE2 315 aa16.71■□□□□ 0.27
LINC01960-201ENST00000563759 A0A087X0K7 114 aa16.71■□□□□ 0.27
LINC01960-201ENST00000563759 CHEK1O14757 476 aa16.71■□□□□ 0.27
LINC01960-201ENST00000563759 PSG9Q00887 426 aa16.71■□□□□ 0.27
LINC01960-201ENST00000563759 LYPD1Q8N2G4 141 aa16.71■□□□□ 0.27
LINC01960-201ENST00000563759 C5orf17Q8NAS9 161 aa16.71■□□□□ 0.27
LINC01960-201ENST00000563759 CMTM2Q8TAZ6 248 aa16.71■□□□□ 0.27
LINC01960-201ENST00000563759 RAX2Q96IS3 184 aa16.71■□□□□ 0.27
LINC01960-201ENST00000563759 MEOX2P50222 304 aa16.69■□□□□ 0.26
LINC01960-201ENST00000563759 GNG5P63218 68 aa16.69■□□□□ 0.26
LINC01960-201ENST00000563759 FOXL1Q12952 345 aa16.69■□□□□ 0.26
LINC01960-201ENST00000563759 FAM74A3Q4VXF1 159 aa16.69■□□□□ 0.26
LINC01960-201ENST00000563759 CCL24O00175 119 aa16.69■□□□□ 0.26
LINC01960-201ENST00000563759 PEX7O00628 323 aa16.69■□□□□ 0.26
LINC01960-201ENST00000563759 ZNF253O75346 499 aa16.69■□□□□ 0.26
LINC01960-201ENST00000563759 RPL11P62913 178 aaKnown RBP16.69■□□□□ 0.26
LINC01960-201ENST00000563759 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.69■□□□□ 0.26
LINC01960-201ENST00000563759 PEMTQ9UBM1 199 aa16.69■□□□□ 0.26
LINC01960-201ENST00000563759 HELTA6NFD8 242 aa16.68■□□□□ 0.26
LINC01960-201ENST00000563759 HIST1H2BAQ96A08 127 aa16.68■□□□□ 0.26
LINC01960-201ENST00000563759 EPDR1Q9UM22 224 aa16.68■□□□□ 0.26
LINC01960-201ENST00000563759 C2orf70A6NJV1 201 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 SNAPINO95295 136 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 AKR1C3P42330 323 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 RPL35P42766 123 aaKnown RBP16.67■□□□□ 0.26
LINC01960-201ENST00000563759 FHL3Q13643 280 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 NSUN5P1Q3KNT7 163 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 SLC50A1Q9BRV3 221 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 M0QZ24 198 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 M0R036 132 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 OR9G4Q8NGQ1 327 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 C2CD4CQ8TF44 421 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 DLX4Q92988 240 aaPredicted RBP16.67■□□□□ 0.26
LINC01960-201ENST00000563759 ATG101Q9BSB4 218 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 ZNF331Q9NQX6 463 aaPredicted RBP16.67■□□□□ 0.26
LINC01960-201ENST00000563759 NAT8Q9UHE5 227 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 SELENOKQ9Y6D0 94 aa16.67■□□□□ 0.26
LINC01960-201ENST00000563759 CBLN1P23435 193 aa16.66■□□□□ 0.26
LINC01960-201ENST00000563759 CNN1P51911 297 aaKnown RBP16.66■□□□□ 0.26
LINC01960-201ENST00000563759 KRTAP10-3P60369 221 aa16.66■□□□□ 0.26
LINC01960-201ENST00000563759 TCRAP04437 139 aa16.65■□□□□ 0.26
LINC01960-201ENST00000563759 TVP23CQ96ET8 276 aa16.65■□□□□ 0.26
LINC01960-201ENST00000563759 FOLR2P14207 255 aa16.65■□□□□ 0.26
LINC01960-201ENST00000563759 TMEM241Q24JQ0 296 aa16.65■□□□□ 0.26
LINC01960-201ENST00000563759 TCF24Q7RTU0 167 aa16.65■□□□□ 0.26
LINC01960-201ENST00000563759 NDUFA11Q86Y39 141 aa16.65■□□□□ 0.26
LINC01960-201ENST00000563759 CLRN3Q8NCR9 226 aa16.65■□□□□ 0.26
LINC01960-201ENST00000563759 ATRQ13535 2644 aa16.64■□□□□ 0.25
LINC01960-201ENST00000563759 IGKV3-7A0A075B6H7 116 aa16.64■□□□□ 0.25
LINC01960-201ENST00000563759 ADARB2-AS1A8MUL3 147 aa16.64■□□□□ 0.25
LINC01960-201ENST00000563759 M0R3E3 92 aa16.64■□□□□ 0.25
LINC01960-201ENST00000563759 CSN1S1P47710 185 aa16.64■□□□□ 0.25
LINC01960-201ENST00000563759 AWAT1Q58HT5 328 aa16.64■□□□□ 0.25
LINC01960-201ENST00000563759 IGFL4Q6B9Z1 124 aa16.64■□□□□ 0.25
LINC01960-201ENST00000563759 NRN1Q9NPD7 142 aa16.64■□□□□ 0.25
LINC01960-201ENST00000563759 PNRC1Q12796 327 aaPredicted RBP16.63■□□□□ 0.25
LINC01960-201ENST00000563759 C16orf92Q96LL3 132 aa16.63■□□□□ 0.25
LINC01960-201ENST00000563759 SDF2L1Q9HCN8 221 aa16.63■□□□□ 0.25
LINC01960-201ENST00000563759 TRBV20OR9-2A0A075B6H5 130 aa16.63■□□□□ 0.25
LINC01960-201ENST00000563759 UBE2G1P62253 170 aa16.63■□□□□ 0.25
LINC01960-201ENST00000563759 ADIRFQ15847 76 aa16.63■□□□□ 0.25
LINC01960-201ENST00000563759 GOLT1AQ6ZVE7 132 aa16.63■□□□□ 0.25
LINC01960-201ENST00000563759 LINC00479Q96M42 142 aa16.63■□□□□ 0.25
LINC01960-201ENST00000563759 GNG4P50150 75 aa16.62■□□□□ 0.25
LINC01960-201ENST00000563759 CENPWQ5EE01 88 aa16.62■□□□□ 0.25
LINC01960-201ENST00000563759 ATRAIDQ6UW56 229 aa16.62■□□□□ 0.25
LINC01960-201ENST00000563759 RNF182Q8N6D2 247 aa16.62■□□□□ 0.25
LINC01960-201ENST00000563759 TRAV34A0A0B4J273 112 aa16.61■□□□□ 0.25
LINC01960-201ENST00000563759 K7EQM0 130 aa16.61■□□□□ 0.25
LINC01960-201ENST00000563759 HLA-DMBP28068 263 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms