RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 HLA-DMAP28067 261 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 GNRHRP30968 328 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 MAS1LP35410 378 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 FXYD4P59646 89 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 RUNX1Q01196 453 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 CATR1Q13166 79 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 PLGLAQ15195 96 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 PRSS8Q16651 343 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 VMA21Q3ZAQ7 101 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 KPRPQ5T749 579 aaPredicted RBP3.26□□□□□ -1.89
LINC00254-201ENST00000563416 AADACL3Q5VUY0 350 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 MRPL55Q7Z7F7 128 aaKnown RBP3.26□□□□□ -1.89
LINC00254-201ENST00000563416 ZNF695Q8IW36 515 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 ARRDC1Q8N5I2 433 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 TMEM229BQ8NBD8 167 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 MCFD2Q8NI22 146 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 TMEM167AQ8TBQ9 72 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 C7orf33Q8WU49 177 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 UBE2E2Q96LR5 201 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 SCGB3A2Q96PL1 93 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 SDHCQ99643 169 aaPredicted RBP3.26□□□□□ -1.89
LINC00254-201ENST00000563416 ZNF2Q9BSG1 426 aaPredicted RBP3.26□□□□□ -1.89
LINC00254-201ENST00000563416 FAM103A1Q9BTL3 118 aaKnown RBP3.26□□□□□ -1.89
LINC00254-201ENST00000563416 PARP11Q9NR21 331 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 BET1LQ9NYM9 111 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 TAS2R8Q9NYW2 309 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 COMMD9Q9P000 198 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 RSL24D1Q9UHA3 163 aaKnown RBP3.26□□□□□ -1.89
LINC00254-201ENST00000563416 PRELID3BQ9Y3B1 194 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 WSB1Q9Y6I7 421 aa3.26□□□□□ -1.89
LINC00254-201ENST00000563416 ANKRD20A5PA0PJZ0 165 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 H3BUA1 57 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 I3L521 148 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 GPR31O00270 319 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 PGLYRP1O75594 196 aaPredicted RBP3.25□□□□□ -1.89
LINC00254-201ENST00000563416 OR2A4O95047 310 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 HRASP01112 189 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 CD3DP04234 171 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 BTCP35070 178 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 PFN2P35080 140 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 MYCNOSP40205 109 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 ETV6P41212 452 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 APOC4P55056 127 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 FGF8P55075 233 aaPredicted RBP3.25□□□□□ -1.89
LINC00254-201ENST00000563416 TAS2R31P59538 309 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 TMEM267Q0VDI3 215 aaPredicted RBP3.25□□□□□ -1.89
LINC00254-201ENST00000563416 FXYD3Q14802 87 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 KLK9Q2XQG4 91 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 RNASE10Q5GAN6 216 aaKnown RBP3.25□□□□□ -1.89
LINC00254-201ENST00000563416 LPCAT3Q6P1A2 487 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 UNQ5815/PRO19632Q6UWF5 114 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 IDO2Q6ZQW0 420 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 SELENOHQ8IZQ5 122 aaKnown RBP3.25□□□□□ -1.89
LINC00254-201ENST00000563416 TMEM61Q8N0U2 210 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 LFNGQ8NES3 379 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 OR51H1Q8NH63 302 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 OR4A5Q8NH83 315 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 GRPEL2Q8TAA5 225 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 VSTM2AQ8TAG5 236 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 C4orf3Q8WVX3 66 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 SRSF12Q8WXF0 261 aaKnown RBP3.25□□□□□ -1.89
LINC00254-201ENST00000563416 C16orf74Q96GX8 76 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 DIRAS2Q96HU8 199 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 OR2A7Q96R45 310 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 DCUN1D5Q9BTE7 237 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 C6orf62Q9GZU0 229 aaPredicted RBP3.25□□□□□ -1.89
LINC00254-201ENST00000563416 ZNF430Q9H8G1 570 aaPredicted RBP3.25□□□□□ -1.89
LINC00254-201ENST00000563416 SLC2A9Q9NRM0 540 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 KLK9Q9UKQ9 250 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 V9GYH0 126 aa3.25□□□□□ -1.89
LINC00254-201ENST00000563416 A0A1B0GW64 132 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 FABP12A6NFH5 140 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 CCDC160A6NGH7 325 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 E7EUB6 86 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 UPK2O00526 184 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 S1PR2O95136 353 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 CNIH1O95406 144 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 RAB3DO95716 219 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 IGKV1-39P01597 117 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 IGKV1D-39P04432 117 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 LGALS1P09382 135 aaKnown RBP3.24□□□□□ -1.89
LINC00254-201ENST00000563416 AKAIN1P0CW23 69 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 RND2P52198 227 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 TSPAN5P62079 268 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 SURF2Q15527 256 aaPredicted RBP3.24□□□□□ -1.89
LINC00254-201ENST00000563416 TAL2Q16559 108 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 DEFB136Q30KP8 78 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 C10orf55Q5SWW7 151 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 LCN12Q6JVE5 192 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 TEX43Q6ZNM6 134 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 CEND1Q8N111 149 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 OR4C16Q8NGL9 310 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 OR13C8Q8NGS7 320 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 TERB2Q8NHR7 220 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 DEDD2Q8WXF8 326 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 DGCR14Q96DF8 476 aaKnown RBP3.24□□□□□ -1.89
LINC00254-201ENST00000563416 SPIN2AQ99865 258 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 SPIN2BQ9BPZ2 258 aa3.24□□□□□ -1.89
LINC00254-201ENST00000563416 TRAV3A0A0B4J244 114 aa3.23□□□□□ -1.89
LINC00254-201ENST00000563416 A0A0J9YXY3 114 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms