RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 RBMXL1Q96E39 390 aaKnown RBP3.58□□□□□ -1.84
SMG1-207ENST00000563235 C20orf78Q9BR46 151 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 PYGO2Q9BRQ0 406 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 SFT2D2O95562 160 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 CYB5AP00167 134 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 Q6ZSN1 163 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 NOTCH2NLQ7Z3S9 236 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 C17orf82Q86X59 251 aaPredicted RBP3.58□□□□□ -1.84
SMG1-207ENST00000563235 MS4A6EQ96DS6 147 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 IMMP2LQ96T52 175 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 NMES1Q9C002 83 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 CKLFQ9UBR5 152 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 AK3Q9UIJ7 227 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 ASH1LQ9NR48 2969 aaKnown RBP3.58□□□□□ -1.84
SMG1-207ENST00000563235 BRCA2P51587 3418 aa3.58□□□□□ -1.84
SMG1-207ENST00000563235 LOC107986453A0A1B0GWG9 222 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 M0R2P5 195 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 CD5LO43866 347 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 IGLV2-8P01709 118 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 CD3DP04234 171 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 ZNF136P52737 540 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 RPL38P63173 70 aaKnown RBP3.57□□□□□ -1.84
SMG1-207ENST00000563235 LGALS9BQ3B8N2 356 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 LGALS9CQ6DKI2 356 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 LCA10Q71F78 164 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 COMMD6Q7Z4G1 85 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 DSCR8Q96T75 97 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 SLC35B3Q9H1N7 401 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 MOB4Q9Y3A3 225 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 SHROOM3Q8TF72 1996 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 IGHV1OR15-1A0A075B7D0 117 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 IGLV5-52A0A0A0MRZ9 124 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 TRAV1-1A0A0B4J248 108 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 TMEM235A6NFC5 223 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 IGLL5B9A064 214 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 UMAD1C9J7I0 102 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 IGHV4-38-2P0DP08 117 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 CRYGAP11844 174 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 QRFPP83859 136 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 INSL4Q14641 139 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 GPHB5Q86YW7 130 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 HIST1H4GQ99525 98 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 MYO10Q9HD67 2058 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 TRGV8A0A0C4DH27 118 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 NDUFC2-KCTD14E9PQ53 114 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 UBE2L6O14933 153 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 SYNGR2O43760 224 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 CST7O76096 145 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 IGHV4-39P01824 125 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 IGHG1P01857 330 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 SEC11BP0C7V7 166 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 ZNF823P16415 610 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 RPL23P62829 140 aaKnown RBP3.57□□□□□ -1.84
SMG1-207ENST00000563235 Q56UQ5 140 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 OR10AC1Q8NH08 325 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 PPP1R1CQ8WVI7 109 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 ABHD14BQ96IU4 210 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 GOLGA2P5Q9HBQ8 144 aa3.57□□□□□ -1.84
SMG1-207ENST00000563235 SETXQ7Z333 2677 aaKnown RBP3.57□□□□□ -1.84
SMG1-207ENST00000563235 USP24Q9UPU5 2620 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 TRAV12-2A0A075B6T6 113 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 IGKV6D-21A0A0A0MT36 114 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 ZNF705FA8MVS1 300 aaPredicted RBP3.56□□□□□ -1.84
SMG1-207ENST00000563235 ZNF705DP0CH99 300 aaPredicted RBP3.56□□□□□ -1.84
SMG1-207ENST00000563235 ZNF705BP0CI00 300 aaPredicted RBP3.56□□□□□ -1.84
SMG1-207ENST00000563235 SMIM11AP58511 58 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 EBI3Q14213 229 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 OR8A1Q8NGG7 326 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 WFDC5Q8TCV5 224 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 TOMM6Q96B49 74 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 VSIG2Q96IQ7 327 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 AMELYQ99218 206 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 SHANK2-AS3Q9BTD1 123 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 CCL28Q9NRJ3 127 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 IL36RNQ9UBH0 155 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 HHLA3Q9XRX5 114 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 HELZP42694 1942 aaKnown RBP3.56□□□□□ -1.84
SMG1-207ENST00000563235 SCN1AP35498 2009 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 RBAKDNA6NC62 111 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 HYPMO75409 117 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 IGKV1-5P01602 117 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 IGLV1-40P01703 118 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 IGLC2P0DOY2 106 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 IGLC3P0DOY3 106 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 LGALS3P17931 250 aaKnown RBP3.56□□□□□ -1.84
SMG1-207ENST00000563235 HBBP68871 147 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 C17orf58Q2M2W7 97 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 SPRNQ5BIV9 151 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 ZFHX4Q86UP3 3567 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 C10orf105Q8TEF2 133 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 NAA60Q9H7X0 242 aa3.56□□□□□ -1.84
SMG1-207ENST00000563235 NLRC5Q86WI3 1866 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 KIF26AQ9ULI4 1882 aaPredicted RBP3.55□□□□□ -1.84
SMG1-207ENST00000563235 IGKV6-21A0A0C4DH24 114 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 IGKV1-12A0A0C4DH73 117 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 A6NIN4 97 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 IGKV1D-12P01611 117 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 HLA-DRB4P13762 266 aa3.55□□□□□ -1.84
SMG1-207ENST00000563235 CYCSP99999 105 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms