RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 RNF141Q8WVD5 230 aa9.48□□□□□ -0.89
CDH11-204ENST00000562712 RAB24Q969Q5 203 aa9.48□□□□□ -0.89
CDH11-204ENST00000562712 SAT2Q96F10 170 aaPredicted RBP9.48□□□□□ -0.89
CDH11-204ENST00000562712 C16orf92Q96LL3 132 aa9.48□□□□□ -0.89
CDH11-204ENST00000562712 PAXXQ9BUH6 204 aa9.48□□□□□ -0.89
CDH11-204ENST00000562712 MAP6D1Q9H9H5 199 aa9.48□□□□□ -0.89
CDH11-204ENST00000562712 ZNF253O75346 499 aa9.47□□□□□ -0.89
CDH11-204ENST00000562712 ZNF688P0C7X2 276 aa9.47□□□□□ -0.89
CDH11-204ENST00000562712 PYYP10082 97 aa9.47□□□□□ -0.89
CDH11-204ENST00000562712 CDC34P49427 236 aaPredicted RBP9.47□□□□□ -0.89
CDH11-204ENST00000562712 DEFB121Q5J5C9 76 aa9.47□□□□□ -0.89
CDH11-204ENST00000562712 PQLC2Q6ZP29 291 aa9.47□□□□□ -0.89
CDH11-204ENST00000562712 DEFB125Q8N687 156 aa9.47□□□□□ -0.89
CDH11-204ENST00000562712 LRRC20Q8TCA0 184 aa9.47□□□□□ -0.89
CDH11-204ENST00000562712 ZNF503Q96F45 646 aa9.47□□□□□ -0.89
CDH11-204ENST00000562712 ZNF586Q9NXT0 402 aa9.47□□□□□ -0.89
CDH11-204ENST00000562712 CLEC5AQ9NY25 188 aa9.47□□□□□ -0.89
CDH11-204ENST00000562712 UBQLN2Q9UHD9 624 aa9.47□□□□□ -0.89
CDH11-204ENST00000562712 TRBV19A0A075B6N1 114 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 TRAV8-2A0A0B4J237 113 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 OR7C2O60412 319 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 NBEAP1P0C6P0 100 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 STAG3L2P0CL84 134 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 STAG3L3P0CL85 134 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 IGHV4-30-4P0DP06 118 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 DEFB131AP59861 70 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 PDE6HQ13956 83 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 PSMG4Q5JS54 123 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 DPPA3Q6W0C5 159 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 APRG1Q8IVJ8 170 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 TMED6Q8WW62 240 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 FXYD5Q96DB9 178 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 LINC00052Q96N35 136 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 SLC50A1Q9BRV3 221 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 TUBA4BQ9H853 241 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 ZNF331Q9NQX6 463 aaPredicted RBP9.46□□□□□ -0.9
CDH11-204ENST00000562712 PLA2G2EQ9NZK7 142 aa9.46□□□□□ -0.9
CDH11-204ENST00000562712 CTXND1A0A1B0GTU2 59 aa9.45□□□□□ -0.9
CDH11-204ENST00000562712 CXorf1O96002 111 aa9.45□□□□□ -0.9
CDH11-204ENST00000562712 SNRPCP09234 159 aaKnown RBP9.45□□□□□ -0.9
CDH11-204ENST00000562712 RAB5CP51148 216 aa9.45□□□□□ -0.9
CDH11-204ENST00000562712 PSG9Q00887 426 aa9.45□□□□□ -0.9
CDH11-204ENST00000562712 ZNF726P1Q15940 193 aa9.45□□□□□ -0.9
CDH11-204ENST00000562712 MRAPQ8TCY5 172 aa9.45□□□□□ -0.9
CDH11-204ENST00000562712 PHYHIPLQ96FC7 376 aa9.45□□□□□ -0.9
CDH11-204ENST00000562712 WFDC10AQ9H1F0 79 aa9.45□□□□□ -0.9
CDH11-204ENST00000562712 HMGB3O15347 200 aaKnown RBP9.44□□□□□ -0.9
CDH11-204ENST00000562712 NDUFB4O95168 129 aa9.44□□□□□ -0.9
CDH11-204ENST00000562712 OR10J4P0C629 311 aa9.44□□□□□ -0.9
CDH11-204ENST00000562712 ARL14EPLP0DKL9 152 aa9.44□□□□□ -0.9
CDH11-204ENST00000562712 IGFL4Q6B9Z1 124 aa9.44□□□□□ -0.9
CDH11-204ENST00000562712 LINC00322Q6ZN03 302 aaPredicted RBP9.44□□□□□ -0.9
CDH11-204ENST00000562712 LYPD1Q8N2G4 141 aa9.44□□□□□ -0.9
CDH11-204ENST00000562712 SUN5Q8TC36 379 aa9.44□□□□□ -0.9
CDH11-204ENST00000562712 BLNKQ8WV28 456 aa9.44□□□□□ -0.9
CDH11-204ENST00000562712 C20orf173Q96LM9 149 aa9.44□□□□□ -0.9
CDH11-204ENST00000562712 CITED4Q96RK1 184 aa9.44□□□□□ -0.9
CDH11-204ENST00000562712 SRD5A3Q9H8P0 318 aa9.44□□□□□ -0.9
CDH11-204ENST00000562712 BOLA1Q9Y3E2 137 aa9.44□□□□□ -0.9
CDH11-204ENST00000562712 H3BTX0 84 aa9.43□□□□□ -0.9
CDH11-204ENST00000562712 SLC17A3O00476 420 aa9.43□□□□□ -0.9
CDH11-204ENST00000562712 EIF3GO75821 320 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDH11-204ENST00000562712 FHITP49789 147 aa9.43□□□□□ -0.9
CDH11-204ENST00000562712 UBE2L3P68036 154 aaKnown RBP9.43□□□□□ -0.9
CDH11-204ENST00000562712 ZNF124Q15973 351 aa9.43□□□□□ -0.9
CDH11-204ENST00000562712 PSG3Q16557 428 aa9.43□□□□□ -0.9
CDH11-204ENST00000562712 SSX7Q7RTT5 188 aa9.43□□□□□ -0.9
CDH11-204ENST00000562712 RNF182Q8N6D2 247 aa9.43□□□□□ -0.9
CDH11-204ENST00000562712 MBD3L1Q8WWY6 194 aa9.43□□□□□ -0.9
CDH11-204ENST00000562712 RBMY1BA6NDE4 496 aaKnown RBP9.42□□□□□ -0.9
CDH11-204ENST00000562712 RBMY1EA6NEQ0 496 aaKnown RBP9.42□□□□□ -0.9
CDH11-204ENST00000562712 BOLA2-SMG1P6H3BVE0 249 aa9.42□□□□□ -0.9
CDH11-204ENST00000562712 RBMY1DP0C7P1 496 aaKnown RBP9.42□□□□□ -0.9
CDH11-204ENST00000562712 FRMD6-AS1P0C7T7 363 aa9.42□□□□□ -0.9
CDH11-204ENST00000562712 GCHFRP30047 84 aa9.42□□□□□ -0.9
CDH11-204ENST00000562712 SULT1A2P50226 295 aa9.42□□□□□ -0.9
CDH11-204ENST00000562712 FOXI2Q6ZQN5 318 aa9.42□□□□□ -0.9
CDH11-204ENST00000562712 MRPL53Q96EL3 112 aaKnown RBP9.42□□□□□ -0.9
CDH11-204ENST00000562712 SAV1Q9H4B6 383 aaPredicted RBP9.42□□□□□ -0.9
CDH11-204ENST00000562712 AAMDCQ9H7C9 122 aa9.42□□□□□ -0.9
CDH11-204ENST00000562712 TMEM167BQ9NRX6 74 aa9.42□□□□□ -0.9
CDH11-204ENST00000562712 PRELID1Q9Y255 219 aa9.42□□□□□ -0.9
CDH11-204ENST00000562712 COL7A1Q02388 2944 aa9.41□□□□□ -0.9
CDH11-204ENST00000562712 LOC102724200A0A096LPH7 203 aaPredicted RBP9.41□□□□□ -0.9
CDH11-204ENST00000562712 MAP1LC3B2A6NCE7 125 aa9.41□□□□□ -0.9
CDH11-204ENST00000562712 H3BMM0 161 aa9.41□□□□□ -0.9
CDH11-204ENST00000562712 HLA-DMBP28068 263 aa9.41□□□□□ -0.9
CDH11-204ENST00000562712 RANP62826 216 aaKnown RBP9.41□□□□□ -0.9
CDH11-204ENST00000562712 ACTL10Q5JWF8 245 aa9.41□□□□□ -0.9
CDH11-204ENST00000562712 EBLN2Q6P2I7 272 aa9.41□□□□□ -0.9
CDH11-204ENST00000562712 STHQ8IWL8 128 aa9.41□□□□□ -0.9
CDH11-204ENST00000562712 ZNF738Q8NE65 137 aa9.41□□□□□ -0.9
CDH11-204ENST00000562712 FAM213BQ8TBF2 198 aa9.41□□□□□ -0.9
CDH11-204ENST00000562712 CLUHP3Q96NS8 147 aa9.41□□□□□ -0.9
CDH11-204ENST00000562712 MAP1LC3BQ9GZQ8 125 aa9.41□□□□□ -0.9
CDH11-204ENST00000562712 KIR2DL5BA0A0G2JN68 375 aa9.4□□□□□ -0.9
CDH11-204ENST00000562712 KIR2DL5BA0A0G2JPC4 375 aa9.4□□□□□ -0.9
CDH11-204ENST00000562712 A0A0J9YX75 114 aa9.4□□□□□ -0.9
CDH11-204ENST00000562712 KNCNA6PVL3 124 aa9.4□□□□□ -0.9
CDH11-204ENST00000562712 H2AFB1P0C5Y9 115 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms