RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 TOMM20LQ6UXN7 152 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 SLC16A13Q7RTY0 426 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 CACNG8Q8WXS5 425 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 RASL10AQ92737 203 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 CIB3Q96Q77 187 aaPredicted RBP3.35□□□□□ -1.87
SMG1-206ENST00000562668 RAB40CQ96S21 281 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 ENY2Q9NPA8 101 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 LYRM2Q9NU23 88 aaPredicted RBP3.35□□□□□ -1.87
SMG1-206ENST00000562668 PSENENQ9NZ42 101 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 GSKIPQ9P0R6 139 aa3.35□□□□□ -1.87
SMG1-206ENST00000562668 LSM5Q9Y4Y9 91 aaKnown RBP3.35□□□□□ -1.87
SMG1-206ENST00000562668 IGHV3OR16-8A0A075B7F1 116 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 WI2-2373I1.2A0A1W2PRP0 233 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 FNDC10F2Z333 226 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 K7EMT4 169 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 SSNA1O43805 119 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 MPC2O95563 127 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 METTL15P1P0C7V9 234 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 FOLR2P14207 255 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 CBLN1P23435 193 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 NPBWR1P48145 328 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 INSL3P51460 131 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 YPEL3P61236 119 aaPredicted RBP3.34□□□□□ -1.87
SMG1-206ENST00000562668 RRAS2P62070 204 aaPredicted RBP3.34□□□□□ -1.87
SMG1-206ENST00000562668 DLK1P80370 383 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 CYCSP99999 105 aaKnown RBP3.34□□□□□ -1.87
SMG1-206ENST00000562668 ZNF90Q03938 601 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 USF2Q15853 346 aaPredicted RBP3.34□□□□□ -1.87
SMG1-206ENST00000562668 DEFB114Q30KQ6 69 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 Q56UQ5 140 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 C9orf66Q5T8R8 295 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 ZNF600Q6ZNG1 722 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 Q6ZR54 194 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 ACOT7LQ6ZUV0 252 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 TMEM252Q8N6L7 170 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 Q8NBF4 154 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 UBAC2Q8NBM4 344 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 OR1S2Q8NGQ3 325 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 PPP1R1CQ8WVI7 109 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 VSIRQ9H7M9 311 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 MLXQ9UH92 298 aa3.34□□□□□ -1.87
SMG1-206ENST00000562668 STRAPQ9Y3F4 350 aaKnown RBP3.34□□□□□ -1.87
SMG1-206ENST00000562668 PUS1Q9Y606 427 aaKnown RBP eCLIP3.34□□□□□ -1.87
SMG1-206ENST00000562668 DYNC2H1Q8NCM8 4307 aaKnown RBP3.33□□□□□ -1.88
SMG1-206ENST00000562668 TRAV30A0A087WSZ9 112 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 IGHV7-4-1A0A0J9YVY3 117 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 E5RGE8 158 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 K7EIL1 84 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 CHEK1O14757 476 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 NUPL2O15504 423 aaKnown RBP3.33□□□□□ -1.88
SMG1-206ENST00000562668 ZNF207O43670 478 aaKnown RBP3.33□□□□□ -1.88
SMG1-206ENST00000562668 GNG7O60262 68 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 SAP30O75446 220 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 PRB2P02812 416 aaPredicted RBP3.33□□□□□ -1.88
SMG1-206ENST00000562668 IFNA4P05014 189 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 GIPP09681 153 aaPredicted RBP3.33□□□□□ -1.88
SMG1-206ENST00000562668 KRTAP1-4P0C5Y4 121 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 LINC00869P0C866 280 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 CRYBB3P26998 211 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 OR10J1P30954 320 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 P2RY1P47900 373 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 SULT1A1P50225 295 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 S100A10P60903 97 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 RAB11AP62491 216 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 EWSR1Q01844 656 aaKnown RBP eCLIP3.33□□□□□ -1.88
SMG1-206ENST00000562668 FAM106AQ4KMX7 169 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 ETFRF1Q6IPR1 90 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 PATE2Q6UY27 113 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 TMEM144Q7Z5S9 345 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 PHLDA1Q8WV24 401 aaPredicted RBP3.33□□□□□ -1.88
SMG1-206ENST00000562668 ACY3Q96HD9 319 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 TRGV9Q99603 122 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 GGACTQ9BVM4 153 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 MED28Q9H204 178 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 DAZ1Q9NQZ3 744 aaKnown RBP3.33□□□□□ -1.88
SMG1-206ENST00000562668 MRPL27Q9P0M9 148 aaKnown RBP3.33□□□□□ -1.88
SMG1-206ENST00000562668 MBD2Q9UBB5 411 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 SMPXQ9UHP9 88 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 WDR83OSQ9Y284 106 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 UFC1Q9Y3C8 167 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 SELENOKQ9Y6D0 94 aa3.33□□□□□ -1.88
SMG1-206ENST00000562668 DNAH7Q8WXX0 4024 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 ZNF320A2RRD8 509 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 RNF222A6NCQ9 220 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 CST7O76096 145 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 CAV2P51636 162 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 PLP1P60201 277 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 SLC38A11Q08AI6 406 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 LRRC37A5PQ49AS3 106 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 OR8G2PQ6IF36 304 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 BTNL8Q6UX41 500 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 TMEM61Q8N0U2 210 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 POM121L12Q8N7R1 296 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 OR10P1Q8NGE3 313 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 OR2K2Q8NGT1 345 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 ASB13Q8WXK3 278 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 MARC2Q969Z3 335 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 SLC35E1Q96K37 410 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 RNF2Q99496 336 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms