RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 ATG101Q9BSB4 218 aa12.79□□□□□ -0.36
PKD1-225ENST00000562297 GNB4Q9HAV0 340 aa12.79□□□□□ -0.36
PKD1-225ENST00000562297 GCGP01275 180 aa12.78□□□□□ -0.36
PKD1-225ENST00000562297 TCRAP04437 139 aa12.78□□□□□ -0.36
PKD1-225ENST00000562297 TMEM183BQ1AE95 376 aa12.78□□□□□ -0.36
PKD1-225ENST00000562297 USMG5Q96IX5 58 aa12.78□□□□□ -0.36
PKD1-225ENST00000562297 SRP14P37108 136 aaKnown RBP12.78□□□□□ -0.36
PKD1-225ENST00000562297 LYPD1Q8N2G4 141 aa12.78□□□□□ -0.36
PKD1-225ENST00000562297 OR10G8Q8NGN5 311 aa12.78□□□□□ -0.36
PKD1-225ENST00000562297 FOXC2Q99958 501 aa12.78□□□□□ -0.36
PKD1-225ENST00000562297 NIT2Q9NQR4 276 aa12.78□□□□□ -0.36
PKD1-225ENST00000562297 HOXA3O43365 443 aaPredicted RBP12.77□□□□□ -0.37
PKD1-225ENST00000562297 GGCTO75223 188 aaKnown RBP12.77□□□□□ -0.37
PKD1-225ENST00000562297 TRBV12-3P01733 135 aa12.77□□□□□ -0.37
PKD1-225ENST00000562297 FAM3BP58499 235 aaPredicted RBP12.77□□□□□ -0.37
PKD1-225ENST00000562297 RPL15P61313 204 aaKnown RBP12.77□□□□□ -0.37
PKD1-225ENST00000562297 PDE6HQ13956 83 aa12.77□□□□□ -0.37
PKD1-225ENST00000562297 HIST3H2BBQ8N257 126 aa12.77□□□□□ -0.37
PKD1-225ENST00000562297 IMMP2LQ96T52 175 aa12.77□□□□□ -0.37
PKD1-225ENST00000562297 SMAD7O15105 426 aaKnown RBP12.76□□□□□ -0.37
PKD1-225ENST00000562297 BUB3O43684 328 aa12.76□□□□□ -0.37
PKD1-225ENST00000562297 PF4V1P10720 104 aa12.76□□□□□ -0.37
PKD1-225ENST00000562297 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
PKD1-225ENST00000562297 RELQ04864 619 aaPredicted RBP12.76□□□□□ -0.37
PKD1-225ENST00000562297 KRTAP1-1Q07627 177 aa12.76□□□□□ -0.37
PKD1-225ENST00000562297 LCNL1Q6ZST4 164 aa12.76□□□□□ -0.37
PKD1-225ENST00000562297 NHLRC2Q8NBF2 726 aa12.76□□□□□ -0.37
PKD1-225ENST00000562297 TMEM190Q8WZ59 177 aa12.76□□□□□ -0.37
PKD1-225ENST00000562297 GPR61Q9BZJ8 451 aa12.76□□□□□ -0.37
PKD1-225ENST00000562297 SMAD5-AS1Q9Y6J3 95 aa12.76□□□□□ -0.37
PKD1-225ENST00000562297 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.76□□□□□ -0.37
PKD1-225ENST00000562297 FOXL1Q12952 345 aa12.76□□□□□ -0.37
PKD1-225ENST00000562297 BAGE2Q86Y30 109 aa12.76□□□□□ -0.37
PKD1-225ENST00000562297 V9GYV3 84 aa12.76□□□□□ -0.37
PKD1-225ENST00000562297 BAHCC1Q9P281 2608 aa12.76□□□□□ -0.37
PKD1-225ENST00000562297 CUBNO60494 3623 aa12.75□□□□□ -0.37
PKD1-225ENST00000562297 IGHG4P01861 327 aa12.75□□□□□ -0.37
PKD1-225ENST00000562297 S100A2P29034 98 aa12.75□□□□□ -0.37
PKD1-225ENST00000562297 RAB9AP51151 201 aa12.75□□□□□ -0.37
PKD1-225ENST00000562297 KCNIP4Q6PIL6 250 aa12.75□□□□□ -0.37
PKD1-225ENST00000562297 OR8I2Q8N0Y5 310 aa12.75□□□□□ -0.37
PKD1-225ENST00000562297 SGK494Q96LW2 274 aa12.75□□□□□ -0.37
PKD1-225ENST00000562297 RPH3ALQ9UNE2 315 aa12.75□□□□□ -0.37
PKD1-225ENST00000562297 NF1P21359 2839 aa12.75□□□□□ -0.37
PKD1-225ENST00000562297 IGLV2-11P01706 119 aa12.74□□□□□ -0.37
PKD1-225ENST00000562297 PSMB8P28062 276 aa12.74□□□□□ -0.37
PKD1-225ENST00000562297 ARL3P36405 182 aa12.74□□□□□ -0.37
PKD1-225ENST00000562297 ERVFC1-1P60608 527 aa12.74□□□□□ -0.37
PKD1-225ENST00000562297 FMC1Q96HJ9 113 aa12.74□□□□□ -0.37
PKD1-225ENST00000562297 MLST8Q9BVC4 326 aa12.74□□□□□ -0.37
PKD1-225ENST00000562297 RNASE7Q9H1E1 156 aaKnown RBP12.74□□□□□ -0.37
PKD1-225ENST00000562297 OSTCQ9NRP0 149 aa12.74□□□□□ -0.37
PKD1-225ENST00000562297 U3KQE9 123 aa12.74□□□□□ -0.37
PKD1-225ENST00000562297 S100A7P31151 101 aa12.74□□□□□ -0.37
PKD1-225ENST00000562297 UBE2G1P62253 170 aa12.74□□□□□ -0.37
PKD1-225ENST00000562297 IL17RELQ6ZVW7 336 aa12.74□□□□□ -0.37
PKD1-225ENST00000562297 ZNF702PQ9H963 129 aa12.74□□□□□ -0.37
PKD1-225ENST00000562297 LTAP01374 205 aa12.73□□□□□ -0.37
PKD1-225ENST00000562297 IGHV3-11P01762 117 aa12.73□□□□□ -0.37
PKD1-225ENST00000562297 APOHP02749 345 aaPredicted RBP12.73□□□□□ -0.37
PKD1-225ENST00000562297 MGST1P10620 155 aaKnown RBP12.73□□□□□ -0.37
PKD1-225ENST00000562297 OR10D4PQ8NGN7 298 aa12.73□□□□□ -0.37
PKD1-225ENST00000562297 SMIM12Q96EX1 92 aa12.73□□□□□ -0.37
PKD1-225ENST00000562297 GPR82Q96P67 336 aa12.73□□□□□ -0.37
PKD1-225ENST00000562297 TRAV8-1A0A0A6YYK1 113 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 A0A0G2JLM5 398 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 ACTL10Q5JWF8 245 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 C10orf99Q6UWK7 81 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 GOLT1AQ6ZVE7 132 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 SIGLECL1Q8N7X8 197 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 CMTM2Q8TAZ6 248 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 GSN-AS1Q9NRJ2 163 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 ZNF320A2RRD8 509 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 LINC00587B1AMM8 73 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 M0R3E3 92 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 TYMSP04818 313 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 PYY3Q5JQD4 70 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 OR4X2Q8NGF9 303 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 METTL26Q96S19 204 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 PRSS22Q9GZN4 317 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 IL36BQ9NZH7 164 aa12.72□□□□□ -0.37
PKD1-225ENST00000562297 ZNF253O75346 499 aa12.71□□□□□ -0.37
PKD1-225ENST00000562297 IBA57Q5T440 356 aaKnown RBP12.71□□□□□ -0.37
PKD1-225ENST00000562297 C1orf194Q5T5A4 169 aa12.71□□□□□ -0.37
PKD1-225ENST00000562297 UNQ9165/PRO28630Q6UXU0 137 aa12.71□□□□□ -0.37
PKD1-225ENST00000562297 Q86TA4 180 aa12.71□□□□□ -0.37
PKD1-225ENST00000562297 MTORP42345 2549 aa12.71□□□□□ -0.38
PKD1-225ENST00000562297 A0A087X0K7 114 aa12.71□□□□□ -0.38
PKD1-225ENST00000562297 TRBV6-1A0A0K0K1D8 114 aa12.71□□□□□ -0.38
PKD1-225ENST00000562297 TMEM89A2RUT3 159 aa12.71□□□□□ -0.38
PKD1-225ENST00000562297 DIRC3C9JPN6 131 aa12.71□□□□□ -0.38
PKD1-225ENST00000562297 NDUFA4O00483 81 aa12.71□□□□□ -0.38
PKD1-225ENST00000562297 ZNF207O43670 478 aaKnown RBP12.71□□□□□ -0.38
PKD1-225ENST00000562297 FABP4P15090 132 aa12.71□□□□□ -0.38
PKD1-225ENST00000562297 PSG9Q00887 426 aa12.71□□□□□ -0.38
PKD1-225ENST00000562297 CDPF1Q6NVV7 123 aa12.71□□□□□ -0.38
PKD1-225ENST00000562297 FAM231DQ6ZW35 169 aa12.71□□□□□ -0.38
PKD1-225ENST00000562297 NPFFR1Q9GZQ6 430 aa12.71□□□□□ -0.38
PKD1-225ENST00000562297 IGHV3OR16-13A0A075B7E8 117 aa12.7□□□□□ -0.38
PKD1-225ENST00000562297 IGHV3-74A0A0B4J1X5 117 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms