RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 UBE2CO00762 179 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 OR7C2O60412 319 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 SPP1P10451 314 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 ZNF124Q15973 351 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 HAGHQ16775 308 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 TMEM41BQ5BJD5 291 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 ACTL10Q5JWF8 245 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 EBLN2Q6P2I7 272 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 MIR17HGQ75NE6 70 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 OR10G4Q8NGN3 311 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 OR10G9Q8NGN4 311 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 OR10G7Q8NGN6 311 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 HYLS1Q96M11 299 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 SLC25A2Q9BXI2 301 aa10.35□□□□□ -0.75
IFT140-205ENST00000561954 TRAV5A0A0B4J249 113 aa10.34□□□□□ -0.75
IFT140-205ENST00000561954 HIST1H1EP10412 219 aaKnown RBP10.34□□□□□ -0.75
IFT140-205ENST00000561954 HLA-DRB4P13762 266 aa10.34□□□□□ -0.75
IFT140-205ENST00000561954 RAB2AP61019 212 aa10.34□□□□□ -0.75
IFT140-205ENST00000561954 UBE2L3P68036 154 aaKnown RBP10.34□□□□□ -0.75
IFT140-205ENST00000561954 TRPT1Q86TN4 253 aaKnown RBP10.34□□□□□ -0.75
IFT140-205ENST00000561954 ZNF738Q8NE65 137 aa10.34□□□□□ -0.75
IFT140-205ENST00000561954 C17orf77Q96MU5 243 aa10.34□□□□□ -0.75
IFT140-205ENST00000561954 ASCL2Q99929 193 aa10.34□□□□□ -0.75
IFT140-205ENST00000561954 TM2D3Q9BRN9 247 aa10.34□□□□□ -0.75
IFT140-205ENST00000561954 SH3BGRL3Q9H299 93 aa10.34□□□□□ -0.75
IFT140-205ENST00000561954 SAV1Q9H4B6 383 aaPredicted RBP10.34□□□□□ -0.75
IFT140-205ENST00000561954 ZNF331Q9NQX6 463 aaPredicted RBP10.34□□□□□ -0.75
IFT140-205ENST00000561954 HLA-DRB4X5D2U9 266 aa10.34□□□□□ -0.75
IFT140-205ENST00000561954 DNAH9Q9NYC9 4486 aa10.33□□□□□ -0.76
IFT140-205ENST00000561954 TRBV19A0A075B6N1 114 aa10.33□□□□□ -0.76
IFT140-205ENST00000561954 RPL35AP18077 110 aaKnown RBP10.33□□□□□ -0.76
IFT140-205ENST00000561954 C4BPBP20851 252 aa10.33□□□□□ -0.76
IFT140-205ENST00000561954 CDC34P49427 236 aaPredicted RBP10.33□□□□□ -0.76
IFT140-205ENST00000561954 NUTF2P61970 127 aaKnown RBP10.33□□□□□ -0.76
IFT140-205ENST00000561954 PSG9Q00887 426 aa10.33□□□□□ -0.76
IFT140-205ENST00000561954 ZFP69Q49AA0 526 aa10.33□□□□□ -0.76
IFT140-205ENST00000561954 MORN3Q6PF18 240 aaPredicted RBP10.33□□□□□ -0.76
IFT140-205ENST00000561954 PQLC2Q6ZP29 291 aa10.33□□□□□ -0.76
IFT140-205ENST00000561954 FAM167A-AS1Q96KT0 104 aa10.33□□□□□ -0.76
IFT140-205ENST00000561954 PAXXQ9BUH6 204 aa10.33□□□□□ -0.76
IFT140-205ENST00000561954 ZNF471Q9BX82 626 aaPredicted RBP10.33□□□□□ -0.76
IFT140-205ENST00000561954 OR51M1Q9H341 326 aa10.33□□□□□ -0.76
IFT140-205ENST00000561954 TRAV8-2A0A0B4J237 113 aa10.32□□□□□ -0.76
IFT140-205ENST00000561954 KNCNA6PVL3 124 aa10.32□□□□□ -0.76
IFT140-205ENST00000561954 H3BQ15 152 aa10.32□□□□□ -0.76
IFT140-205ENST00000561954 PYYP10082 97 aa10.32□□□□□ -0.76
IFT140-205ENST00000561954 TPT1P13693 172 aaKnown RBP10.32□□□□□ -0.76
IFT140-205ENST00000561954 AKR1C8PQ5T2L2 129 aa10.32□□□□□ -0.76
IFT140-205ENST00000561954 FAM122CQ6P4D5 195 aa10.32□□□□□ -0.76
IFT140-205ENST00000561954 Q6ZWC4 215 aa10.32□□□□□ -0.76
IFT140-205ENST00000561954 CLUHP3Q96NS8 147 aa10.32□□□□□ -0.76
IFT140-205ENST00000561954 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
IFT140-205ENST00000561954 AAMDCQ9H7C9 122 aa10.32□□□□□ -0.76
IFT140-205ENST00000561954 CYTL1Q9NRR1 136 aa10.32□□□□□ -0.76
IFT140-205ENST00000561954 TP53TG1Q9Y2A0 90 aa10.32□□□□□ -0.76
IFT140-205ENST00000561954 A0A0J9YX75 114 aa10.31□□□□□ -0.76
IFT140-205ENST00000561954 A0A1B0GVG6 124 aa10.31□□□□□ -0.76
IFT140-205ENST00000561954 H3BMM0 161 aa10.31□□□□□ -0.76
IFT140-205ENST00000561954 SLC17A3O00476 420 aa10.31□□□□□ -0.76
IFT140-205ENST00000561954 DUSP14O95147 198 aaKnown RBP10.31□□□□□ -0.76
IFT140-205ENST00000561954 CA1P00915 261 aaPredicted RBP10.31□□□□□ -0.76
IFT140-205ENST00000561954 PSG3Q16557 428 aa10.31□□□□□ -0.76
IFT140-205ENST00000561954 TMUB2Q71RG4 321 aa10.31□□□□□ -0.76
IFT140-205ENST00000561954 RNF182Q8N6D2 247 aa10.31□□□□□ -0.76
IFT140-205ENST00000561954 RNF141Q8WVD5 230 aa10.31□□□□□ -0.76
IFT140-205ENST00000561954 MRPL53Q96EL3 112 aaKnown RBP10.31□□□□□ -0.76
IFT140-205ENST00000561954 C20orf173Q96LM9 149 aa10.31□□□□□ -0.76
IFT140-205ENST00000561954 C1QTNF4Q9BXJ3 329 aa10.31□□□□□ -0.76
IFT140-205ENST00000561954 ACTR3CQ9C0K3 210 aaPredicted RBP10.31□□□□□ -0.76
IFT140-205ENST00000561954 ZNF586Q9NXT0 402 aa10.31□□□□□ -0.76
IFT140-205ENST00000561954 PRELID1Q9Y255 219 aa10.31□□□□□ -0.76
IFT140-205ENST00000561954 OR10J4P0C629 311 aa10.3□□□□□ -0.76
IFT140-205ENST00000561954 NBEAP1P0C6P0 100 aa10.3□□□□□ -0.76
IFT140-205ENST00000561954 EIF5AL1Q6IS14 154 aaKnown RBP10.3□□□□□ -0.76
IFT140-205ENST00000561954 STOML3Q8TAV4 291 aa10.3□□□□□ -0.76
IFT140-205ENST00000561954 BLNKQ8WV28 456 aa10.3□□□□□ -0.76
IFT140-205ENST00000561954 FXYD5Q96DB9 178 aa10.3□□□□□ -0.76
IFT140-205ENST00000561954 SAT2Q96F10 170 aaPredicted RBP10.3□□□□□ -0.76
IFT140-205ENST00000561954 RCHY1Q96PM5 261 aa10.3□□□□□ -0.76
IFT140-205ENST00000561954 RFNGQ9Y644 331 aa10.3□□□□□ -0.76
IFT140-205ENST00000561954 U3KQK5 164 aa10.3□□□□□ -0.76
IFT140-205ENST00000561954 COL7A1Q02388 2944 aa10.29□□□□□ -0.76
IFT140-205ENST00000561954 UMAD1C9J7I0 102 aa10.29□□□□□ -0.76
IFT140-205ENST00000561954 H3BTX0 84 aa10.29□□□□□ -0.76
IFT140-205ENST00000561954 SNRPCP09234 159 aaKnown RBP10.29□□□□□ -0.76
IFT140-205ENST00000561954 SEC11BP0C7V7 166 aa10.29□□□□□ -0.76
IFT140-205ENST00000561954 BAP18Q8IXM2 172 aa10.29□□□□□ -0.76
IFT140-205ENST00000561954 LYPD1Q8N2G4 141 aa10.29□□□□□ -0.76
IFT140-205ENST00000561954 RPP25LQ8N5L8 163 aaKnown RBP10.29□□□□□ -0.76
IFT140-205ENST00000561954 RPUSD4Q96CM3 377 aaKnown RBP10.29□□□□□ -0.76
IFT140-205ENST00000561954 TGP01266 2768 aa10.29□□□□□ -0.76
IFT140-205ENST00000561954 CTXND1A0A1B0GTU2 59 aa10.28□□□□□ -0.76
IFT140-205ENST00000561954 CXorf1O96002 111 aa10.28□□□□□ -0.76
IFT140-205ENST00000561954 STAG3L2P0CL84 134 aa10.28□□□□□ -0.76
IFT140-205ENST00000561954 STAG3L3P0CL85 134 aa10.28□□□□□ -0.76
IFT140-205ENST00000561954 ARL14EPLP0DKL9 152 aa10.28□□□□□ -0.76
IFT140-205ENST00000561954 DEFB135Q30KP9 77 aa10.28□□□□□ -0.76
IFT140-205ENST00000561954 GDF5OSQ5U4N7 250 aa10.28□□□□□ -0.76
IFT140-205ENST00000561954 IGFL4Q6B9Z1 124 aa10.28□□□□□ -0.76
IFT140-205ENST00000561954 OR4B1Q8NGF8 309 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms