RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 RPRMQ9NS64 109 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 GSKIPQ9P0R6 139 aa5.92□□□□□ -1.46
GINS3-204ENST00000561952 FAT2Q9NYQ8 4349 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 A0A0J9YX75 114 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 LOC102723971A0A1B0GUV8 181 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 FAM25EA8MYX2 175 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 SMLR1H3BR10 107 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 M0R2N4 97 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 M0R2Z0 102 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 PRM2P04554 102 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 LINC00869P0C866 280 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 H2BFSP57053 126 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 TCTAP57738 103 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 SLC38A11Q08AI6 406 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 SPINK13Q1W4C9 94 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 IAH1Q2TAA2 248 aaPredicted RBP5.91□□□□□ -1.46
GINS3-204ENST00000561952 FAM222AQ5U5X8 452 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 ZNF705AQ6ZN79 300 aaPredicted RBP5.91□□□□□ -1.46
GINS3-204ENST00000561952 OR4D5Q8NGN0 318 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 OR2T35Q8NGX2 323 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 C17orf77Q96MU5 243 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 UHRF2Q96PU4 802 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 SLC25A39Q9BZJ4 359 aaPredicted RBP5.91□□□□□ -1.46
GINS3-204ENST00000561952 HIGD1AQ9Y241 93 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 RCL1Q9Y2P8 373 aaKnown RBP5.91□□□□□ -1.46
GINS3-204ENST00000561952 GOLT1BQ9Y3E0 138 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 RFNGQ9Y644 331 aa5.91□□□□□ -1.46
GINS3-204ENST00000561952 ZNF705FA8MVS1 300 aaPredicted RBP5.9□□□□□ -1.46
GINS3-204ENST00000561952 H3BRN7 92 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 CFDP00746 253 aaPredicted RBP5.9□□□□□ -1.46
GINS3-204ENST00000561952 HBE1P02100 147 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 AMBPP02760 352 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 SPART-AS1P0CW21 52 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 MEOX2P50222 304 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 CNN1P51911 297 aaKnown RBP5.9□□□□□ -1.46
GINS3-204ENST00000561952 PAX9P55771 341 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 ID3Q02535 119 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 HIST1H1AQ02539 215 aaPredicted RBP5.9□□□□□ -1.46
GINS3-204ENST00000561952 NDUFA5Q16718 116 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 LGALSLQ3ZCW2 172 aaPredicted RBP5.9□□□□□ -1.46
GINS3-204ENST00000561952 TMEM144Q7Z5S9 345 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 BAP18Q8IXM2 172 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 C1orf158Q8N1D5 194 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 ZNF738Q8NE65 137 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 NDUFAF3Q9BU61 184 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 RNF126Q9BV68 326 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 ARL6Q9H0F7 186 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 LSM5Q9Y4Y9 91 aaKnown RBP5.9□□□□□ -1.46
GINS3-204ENST00000561952 HSPB11Q9Y547 144 aa5.9□□□□□ -1.46
GINS3-204ENST00000561952 TRAV12-2A0A075B6T6 113 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 TRAV8-2A0A0B4J237 113 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 TMEM189A5PLL7 270 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 PMS2P5A8MQ11 134 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 ZNF705GA8MUZ8 300 aaPredicted RBP5.89□□□□□ -1.47
GINS3-204ENST00000561952 H3BTX0 84 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 GOSR2O14653 212 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 HYPMO75409 117 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 SIX6O95475 246 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 RRN3P1Q2M238 152 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 UBE2DNLQ8IWF7 75 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 OR10P1Q8NGE3 313 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 LRRC20Q8TCA0 184 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 SMIM8Q96KF7 97 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 NEU1Q99519 415 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 NIPSNAP3BQ9BS92 247 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 SHANK2-AS3Q9BTD1 123 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 DKK2Q9UBU2 259 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 SLC45A2Q9UMX9 530 aa5.89□□□□□ -1.47
GINS3-204ENST00000561952 YTHDF2Q9Y5A9 579 aaKnown RBP5.89□□□□□ -1.47
GINS3-204ENST00000561952 PKHD1P08F94 4074 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 IGLV2-18A0A075B6J9 118 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 C5orf51A6NDU8 294 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 SMIM9A6NGZ8 99 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 L7N2F9 121 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 INSP01308 110 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 MBPP02686 304 aaPredicted RBP5.88□□□□□ -1.47
GINS3-204ENST00000561952 HTN1P15515 57 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 RPL7P18124 248 aaKnown RBP5.88□□□□□ -1.47
GINS3-204ENST00000561952 S100A7P31151 101 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 DAD1P61803 113 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 RHOBP62745 196 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 VAMP2P63027 116 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 DLK1P80370 383 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 CYCSP99999 105 aaKnown RBP5.88□□□□□ -1.47
GINS3-204ENST00000561952 ARL16Q0P5N6 197 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 SAMD13Q5VXD3 122 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 SPATA31B1PQ5VZV4 182 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 AMTNQ6UX39 209 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 TMEM14EPQ6UXP3 125 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 IGF2BP2-AS1Q96M15 143 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 GPR82Q96P67 336 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 NMES1Q9C002 83 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 ARV1Q9H2C2 271 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 NPVFQ9HCQ7 196 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 PPP1R14DQ9NXH3 145 aa5.88□□□□□ -1.47
GINS3-204ENST00000561952 AGPAT2O15120 278 aa5.87□□□□□ -1.47
GINS3-204ENST00000561952 COX7A2P2O60397 106 aa5.87□□□□□ -1.47
GINS3-204ENST00000561952 ATP6V1G1O75348 118 aa5.87□□□□□ -1.47
GINS3-204ENST00000561952 DUSP14O95147 198 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms