RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 SRP19P09132 144 aaKnown RBP2.45□□□□□ -2.02
SMG1-204ENST00000561940 ZNF705DP0CH99 300 aaPredicted RBP2.45□□□□□ -2.02
SMG1-204ENST00000561940 CRYGSP22914 178 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 CSN1S1P47710 185 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 IDH3GP51553 393 aaPredicted RBP2.45□□□□□ -2.02
SMG1-204ENST00000561940 OR4D2P58180 307 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 FADDQ13158 208 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 STX5Q13190 355 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 GRK1Q15835 563 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 SSX8Q7RTT4 187 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 OR51T1Q8NGJ9 327 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 CISHQ9NSE2 258 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 HHLA3Q9XRX5 114 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 SLC22A13Q9Y226 551 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 TIMM9Q9Y5J7 89 aa2.45□□□□□ -2.02
SMG1-204ENST00000561940 TENM2Q9NT68 2774 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 A0A1B0GVG6 124 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 CLDN24A6NM45 220 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 A8MUN3 132 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 NOS1APO75052 506 aaPredicted RBP2.44□□□□□ -2.02
SMG1-204ENST00000561940 PAEPP09466 180 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 S100A7P31151 101 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 ERHP84090 104 aaKnown RBP2.44□□□□□ -2.02
SMG1-204ENST00000561940 AESQ08117 197 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 LYZL1Q6UWQ5 148 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 TMEM86BQ8N661 226 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 TEX29Q8N6K0 151 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 CLDN22Q8N7P3 220 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 OR1L8Q8NGR8 309 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 OR2T4Q8NH00 348 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 PRKDCP78527 4128 aaKnown RBP2.44□□□□□ -2.02
SMG1-204ENST00000561940 SPTBP11277 2137 aa2.44□□□□□ -2.02
SMG1-204ENST00000561940 ARRDC5A6NEK1 342 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 TMEM114B3SHH9 223 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 INMT-MINDY4F8WBC2 141 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 I3L521 148 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 J3QQQ9 107 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 NSA2O95478 260 aaKnown RBP2.43□□□□□ -2.02
SMG1-204ENST00000561940 TFPTP0C1Z6 253 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 FGF6P10767 208 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 RPL26P61254 145 aaKnown RBP2.43□□□□□ -2.02
SMG1-204ENST00000561940 MRPS15P82914 257 aaKnown RBP2.43□□□□□ -2.02
SMG1-204ENST00000561940 IFITM2Q01629 132 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 SPA17Q15506 151 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 ACOT6Q3I5F7 207 aaPredicted RBP2.43□□□□□ -2.02
SMG1-204ENST00000561940 AKIRIN2Q53H80 203 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 RPS19BP1Q86WX3 136 aaKnown RBP2.43□□□□□ -2.02
SMG1-204ENST00000561940 DEFB106AQ8N104 65 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 LRRC25Q8N386 305 aaPredicted RBP2.43□□□□□ -2.02
SMG1-204ENST00000561940 OR4E2Q8NGC2 313 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 TIMM21Q9BVV7 248 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 COMMD5Q9GZQ3 224 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.43□□□□□ -2.02
SMG1-204ENST00000561940 C14orf105Q9NVL8 296 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 RPL26L1Q9UNX3 145 aaKnown RBP2.43□□□□□ -2.02
SMG1-204ENST00000561940 AMMECR1Q9Y4X0 333 aaPredicted RBP2.43□□□□□ -2.02
SMG1-204ENST00000561940 TRRAPQ9Y4A5 3859 aa2.43□□□□□ -2.02
SMG1-204ENST00000561940 EPPK1P58107 5090 aaKnown RBP2.42□□□□□ -2.02
SMG1-204ENST00000561940 DNAJC13O75165 2243 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 IGLV3-9A0A075B6K5 115 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 IGHV3-64A0A075B6Q5 118 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 TMSB15BA0A087X1C1 80 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 PQLC2LA1A4F0 135 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 TMEM210A6NLX4 147 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 CHP2O43745 196 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 DEFA4P12838 97 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 TPI1P60174 286 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 HIST1H4AP62805 103 aaKnown RBP2.42□□□□□ -2.02
SMG1-204ENST00000561940 RELAQ04206 551 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 ZNF791Q3KP31 576 aaPredicted RBP2.42□□□□□ -2.02
SMG1-204ENST00000561940 DCANP1Q8TF63 244 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 LCN9Q8WX39 176 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 ACOT12Q8WYK0 555 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 SLC7A6Q92536 515 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 CHMP6Q96FZ7 201 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 PAQR5Q9NXK6 330 aaPredicted RBP2.42□□□□□ -2.02
SMG1-204ENST00000561940 PCLOQ9Y6V0 5065 aa2.42□□□□□ -2.02
SMG1-204ENST00000561940 ANK3Q12955 4377 aaKnown RBP2.42□□□□□ -2.02
SMG1-204ENST00000561940 HRNRQ86YZ3 2850 aaPredicted RBP2.42□□□□□ -2.02
SMG1-204ENST00000561940 TRBV20OR9-2A0A075B6H5 130 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 MSNP26038 577 aaKnown RBP2.41□□□□□ -2.02
SMG1-204ENST00000561940 AP3S2P59780 193 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 TMEM258P61165 79 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 GLO1Q04760 184 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 SCIMPQ6UWF3 145 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 ZNF705AQ6ZN79 300 aaPredicted RBP2.41□□□□□ -2.02
SMG1-204ENST00000561940 LRRC28Q86X40 367 aaPredicted RBP2.41□□□□□ -2.02
SMG1-204ENST00000561940 SPACA4Q8TDM5 124 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 C10orf105Q8TEF2 133 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 ITFG2Q969R8 447 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 IMMP2LQ96T52 175 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 PRTFDC1Q9NRG1 225 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 FUT9Q9Y231 359 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 PLCE1Q9P212 2302 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 STAB2Q8WWQ8 2551 aa2.41□□□□□ -2.02
SMG1-204ENST00000561940 ALPK2Q86TB3 2170 aa2.4□□□□□ -2.02
SMG1-204ENST00000561940 MED12Q93074 2177 aa2.4□□□□□ -2.02
SMG1-204ENST00000561940 H3BT86 120 aa2.4□□□□□ -2.03
SMG1-204ENST00000561940 C1QAP02745 245 aa2.4□□□□□ -2.03
SMG1-204ENST00000561940 TCRBP04435 133 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms