RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SPTA1P02549 2419 aa14.92□□□□□ -0.02
RAB40C-206ENST00000561781 IGSF10Q6WRI0 2623 aa14.92□□□□□ -0.02
RAB40C-206ENST00000561781 C16orf97H3BN30 126 aa14.92□□□□□ -0.02
RAB40C-206ENST00000561781 GATD1Q8NB37 220 aa14.92□□□□□ -0.02
RAB40C-206ENST00000561781 FDCSPQ8NFU4 85 aa14.92□□□□□ -0.02
RAB40C-206ENST00000561781 OR13A1Q8NGR1 328 aa14.92□□□□□ -0.02
RAB40C-206ENST00000561781 C15orf61A6NNL5 157 aa14.92□□□□□ -0.02
RAB40C-206ENST00000561781 TMEM262E9PQX1 116 aa14.92□□□□□ -0.02
RAB40C-206ENST00000561781 MPV17P39210 176 aa14.92□□□□□ -0.02
RAB40C-206ENST00000561781 RIGQ13278 110 aa14.92□□□□□ -0.02
RAB40C-206ENST00000561781 SLC25A48Q6ZT89 311 aaKnown RBP14.92□□□□□ -0.02
RAB40C-206ENST00000561781 A0A087WX48 190 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 A0A1B0GUT8 65 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 HLA-DRB4P13762 266 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 PLP2Q04941 152 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 HLA-DRB4X5D2U9 266 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 MOSP00540 346 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 SLC25A5P05141 298 aaKnown RBP14.91□□□□□ -0.02
RAB40C-206ENST00000561781 GRPP07492 148 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 FAM106CPP0CH98 169 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 HSPE1P61604 102 aaKnown RBP14.91□□□□□ -0.02
RAB40C-206ENST00000561781 GNG5P63218 68 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 FAM106AQ4KMX7 169 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 RND1Q92730 232 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 SGK494Q96LW2 274 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 CITED1Q99966 193 aa14.91□□□□□ -0.02
RAB40C-206ENST00000561781 RHODO00212 210 aa14.9□□□□□ -0.02
RAB40C-206ENST00000561781 PRRG2O14669 202 aa14.9□□□□□ -0.02
RAB40C-206ENST00000561781 WNT9BO14905 357 aa14.9□□□□□ -0.02
RAB40C-206ENST00000561781 PYYP10082 97 aa14.9□□□□□ -0.02
RAB40C-206ENST00000561781 MYCNOSP40205 109 aa14.9□□□□□ -0.02
RAB40C-206ENST00000561781 LOXL1Q08397 574 aaPredicted RBP14.9□□□□□ -0.02
RAB40C-206ENST00000561781 RPL39P5Q59GN2 51 aa14.9□□□□□ -0.02
RAB40C-206ENST00000561781 FMC1Q96HJ9 113 aa14.9□□□□□ -0.02
RAB40C-206ENST00000561781 SPXQ9BT56 116 aa14.9□□□□□ -0.02
RAB40C-206ENST00000561781 IGKV2D-26A0A0A0MRZ7 120 aa14.9□□□□□ -0.02
RAB40C-206ENST00000561781 MYOD1P15172 320 aa14.9□□□□□ -0.02
RAB40C-206ENST00000561781 NDUFV3P56181 108 aaKnown RBP14.9□□□□□ -0.02
RAB40C-206ENST00000561781 RPS19BP1Q86WX3 136 aaKnown RBP14.9□□□□□ -0.02
RAB40C-206ENST00000561781 ITLN1Q8WWA0 313 aa14.9□□□□□ -0.02
RAB40C-206ENST00000561781 DKK2Q9UBU2 259 aa14.9□□□□□ -0.02
RAB40C-206ENST00000561781 CENPVL3A0A0U1RRI6 287 aa14.89□□□□□ -0.03
RAB40C-206ENST00000561781 TMEM8BA6NDV4 472 aa14.89□□□□□ -0.03
RAB40C-206ENST00000561781 ID1P41134 155 aa14.89□□□□□ -0.03
RAB40C-206ENST00000561781 SMCPP49901 116 aaPredicted RBP14.89□□□□□ -0.03
RAB40C-206ENST00000561781 MEOX1P50221 254 aa14.89□□□□□ -0.03
RAB40C-206ENST00000561781 DLX4Q92988 240 aaPredicted RBP14.89□□□□□ -0.03
RAB40C-206ENST00000561781 DCTN5Q9BTE1 182 aa14.89□□□□□ -0.03
RAB40C-206ENST00000561781 RAB1BQ9H0U4 201 aa14.89□□□□□ -0.03
RAB40C-206ENST00000561781 RBP4P02753 201 aa14.88□□□□□ -0.03
RAB40C-206ENST00000561781 ZNF766Q5HY98 468 aa14.88□□□□□ -0.03
RAB40C-206ENST00000561781 FOXA2Q9Y261 457 aaPredicted RBP14.88□□□□□ -0.03
RAB40C-206ENST00000561781 RITA1Q96K30 269 aa14.88□□□□□ -0.03
RAB40C-206ENST00000561781 S1PR3Q99500 378 aa14.88□□□□□ -0.03
RAB40C-206ENST00000561781 CCDC179H3BU77 68 aa14.87□□□□□ -0.03
RAB40C-206ENST00000561781 COL8A1P27658 744 aa14.87□□□□□ -0.03
RAB40C-206ENST00000561781 CXorf67Q86X51 503 aaPredicted RBP14.87□□□□□ -0.03
RAB40C-206ENST00000561781 TUSC5Q8IXB3 177 aa14.87□□□□□ -0.03
RAB40C-206ENST00000561781 ZNF714Q96N38 554 aa14.87□□□□□ -0.03
RAB40C-206ENST00000561781 NDUFS7O75251 213 aa14.87□□□□□ -0.03
RAB40C-206ENST00000561781 IGHV3-13P01766 116 aa14.87□□□□□ -0.03
RAB40C-206ENST00000561781 TEN1Q86WV5 123 aa14.87□□□□□ -0.03
RAB40C-206ENST00000561781 PDPNQ86YL7 162 aa14.87□□□□□ -0.03
RAB40C-206ENST00000561781 SRSF8Q9BRL6 282 aaKnown RBP14.87□□□□□ -0.03
RAB40C-206ENST00000561781 ZNF71Q9NQZ8 489 aaPredicted RBP14.87□□□□□ -0.03
RAB40C-206ENST00000561781 TMEM14BQ9NUH8 114 aa14.87□□□□□ -0.03
RAB40C-206ENST00000561781 IGHG4P01861 327 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 ZNF688P0C7X2 276 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 KIR2DS2P43631 304 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 DIAPH2-AS1Q14236 149 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 MLANAQ16655 118 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 KLF17Q5JT82 389 aaPredicted RBP14.86□□□□□ -0.03
RAB40C-206ENST00000561781 OR1L4Q8NGR5 311 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 FXYD5Q96DB9 178 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 MAP1LC3AQ9H492 121 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 HHLA3Q9XRX5 114 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 TANC2Q9HCD6 1990 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 LOC389332A0A1B0GUA5 103 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 COX7A2P2O60397 106 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 ATP5IP56385 69 aaPredicted RBP14.86□□□□□ -0.03
RAB40C-206ENST00000561781 GAGE2BQ13066 116 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 GAGE2EQ4V326 116 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 PPP1R35Q8TAP8 253 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 HES7Q9BYE0 225 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 TTTY13Q9BZ97 58 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 ZMAT4Q9H898 229 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 GAGE2DQ9UEU5 116 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 METRNQ9UJH8 293 aa14.86□□□□□ -0.03
RAB40C-206ENST00000561781 CFAP46Q8IYW2 2715 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 C15orf65H3BRN8 121 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 K7EMI3 77 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 SPINT2O43291 252 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 ALKBH6Q3KRA9 238 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 ZNF826PQ6ZT77 177 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 FAM169BQ8N8A8 192 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 VPREB3Q9UKI3 123 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 CHD6Q8TD26 2715 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 IGKV3D-15A0A087WSY6 115 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 EVI2AP22794 236 aa14.85□□□□□ -0.03
RAB40C-206ENST00000561781 C10orf113Q5VZT2 155 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms