RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 MRPL54Q6P161 138 aaKnown RBP6.31□□□□□ -1.4
PALB2-202ENST00000561514 KCNIP4Q6PIL6 250 aa6.31□□□□□ -1.4
PALB2-202ENST00000561514 ZNF66Q6ZN08 573 aa6.31□□□□□ -1.4
PALB2-202ENST00000561514 STXBP6Q8NFX7 210 aa6.31□□□□□ -1.4
PALB2-202ENST00000561514 ANAPC16Q96DE5 110 aa6.31□□□□□ -1.4
PALB2-202ENST00000561514 SPIN2AQ99865 258 aa6.31□□□□□ -1.4
PALB2-202ENST00000561514 SPIN2BQ9BPZ2 258 aa6.31□□□□□ -1.4
PALB2-202ENST00000561514 PSMG3Q9BT73 122 aaPredicted RBP6.31□□□□□ -1.4
PALB2-202ENST00000561514 RNF126Q9BV68 326 aa6.31□□□□□ -1.4
PALB2-202ENST00000561514 PLEKHA3Q9HB20 300 aa6.31□□□□□ -1.4
PALB2-202ENST00000561514 TECRQ9NZ01 308 aaKnown RBP6.31□□□□□ -1.4
PALB2-202ENST00000561514 AK6Q9Y3D8 172 aaKnown RBP6.31□□□□□ -1.4
PALB2-202ENST00000561514 FRAS1Q86XX4 4008 aa6.31□□□□□ -1.4
PALB2-202ENST00000561514 VPS13DQ5THJ4 4388 aa6.31□□□□□ -1.4
PALB2-202ENST00000561514 KMT2AQ03164 3969 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 ZNF320A2RRD8 509 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 NPIPB5A8MRT5 1133 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 SLC17A3O00476 420 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 TUSC2O75896 110 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 IGLV2-14P01704 120 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 MBPP02686 304 aaPredicted RBP6.3□□□□□ -1.4
PALB2-202ENST00000561514 PRH1P02810 166 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 AKR1C4P17516 323 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 PIGPP57054 158 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 ATP5G2Q06055 141 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 EIF4EBP1Q13541 118 aaPredicted RBP6.3□□□□□ -1.4
PALB2-202ENST00000561514 PMCHL1Q16048 86 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 TNXAQ16473 311 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 TMEM128Q5BJH2 165 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 C10orf55Q5SWW7 151 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 RPL7L1Q6DKI1 246 aaKnown RBP6.3□□□□□ -1.4
PALB2-202ENST00000561514 FAAP20Q6NZ36 180 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 GPHB5Q86YW7 130 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 MMD2Q8IY49 270 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 CMTM1Q8IZ96 169 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 DEFB125Q8N687 156 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 MRAP2Q96G30 205 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 CCDC140Q96MF4 163 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 SIGMAR1Q99720 223 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 WFDC10AQ9H1F0 79 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 ZNF257Q9Y2Q1 563 aa6.3□□□□□ -1.4
PALB2-202ENST00000561514 TRAV9-1A0A075B6T8 112 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 IGKV1D-8A0A087WSZ0 117 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 TRAV1-1A0A0B4J248 108 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 GAGE12BA1L429 117 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 TMEM213A2RRL7 107 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 TSPAN13O95857 204 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 APELAP0DMC3 54 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 S100GP29377 79 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 RPL12P30050 165 aaKnown RBP6.29□□□□□ -1.4
PALB2-202ENST00000561514 CRYBA4P53673 196 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 SRPXP78539 464 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 ZNF266Q14584 549 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 C15orf32Q32M92 178 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 WFDC3Q8IUB2 231 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 ZNF645Q8N7E2 425 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 STPG4Q8N801 248 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 TMEM167AQ8TBQ9 72 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 LINC00476Q8WZB0 136 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 SEC22AQ96IW7 307 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 FANCD2OSQ96PS1 177 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 HECTD4Q9Y4D8 3996 aa6.29□□□□□ -1.4
PALB2-202ENST00000561514 E5RGE8 158 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 H7BYZ3 331 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 MPPED1O15442 326 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 OR2J3O76001 311 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 HRASP01112 189 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 IFNA1P01562 189 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 CD3DP04234 171 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 C8orf88P0DMB2 117 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 IGLC2P0DOY2 106 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 IGLC3P0DOY3 106 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 GNB3P16520 340 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 EDN2P20800 178 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 F2RP25116 425 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 CTRLP40313 264 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 TFPI2P48307 235 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 BRWD1-AS2P59051 145 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 S100A10P60903 97 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 CKS1BP61024 79 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 RPL30P62888 115 aaKnown RBP6.28□□□□□ -1.4
PALB2-202ENST00000561514 TNP2Q05952 138 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 PPP1R1AQ13522 171 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 ARFRP1Q13795 201 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 MSMO1Q15800 293 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 Q6ZN92 141 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 TMEM61Q8N0U2 210 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 VSTM2AQ8TAG5 236 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 CMTM2Q8TAZ6 248 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 DYNLRB2Q8TF09 96 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 GNPNAT1Q96EK6 184 aaPredicted RBP6.28□□□□□ -1.4
PALB2-202ENST00000561514 OVOL2Q9BRP0 275 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 NSG2Q9Y328 171 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 OR2W1Q9Y3N9 320 aa6.28□□□□□ -1.4
PALB2-202ENST00000561514 TRAV25A0A0B4J276 109 aa6.27□□□□□ -1.41
PALB2-202ENST00000561514 IGKV1D-13A0A0B4J2D9 117 aa6.27□□□□□ -1.41
PALB2-202ENST00000561514 IGLC7A0M8Q6 106 aa6.27□□□□□ -1.41
PALB2-202ENST00000561514 E7EUB6 86 aa6.27□□□□□ -1.41
PALB2-202ENST00000561514 ACTL6BO94805 426 aa6.27□□□□□ -1.41
PALB2-202ENST00000561514 KBTBD11O94819 623 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms