RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	MYCNOS	P40205	109 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	PNRC1	Q12796	327 aa	Predicted RBP	5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	BTN1A1	Q13410	526 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	FAM209B	Q5JX69	171 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	TEX38	Q6PEX7	206 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	C10orf99	Q6UWK7	81 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	RNF152	Q8N8N0	203 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	OR4F17	Q8NGA8	305 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	OR4X2	Q8NGF9	303 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	MYOZ3	Q8TDC0	251 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	BLNK	Q8WV28	456 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	TMEM190	Q8WZ59	177 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	CITED1	Q99966	193 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	TCEAL7	Q9BRU2	100 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	DERL1	Q9BUN8	251 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	C20orf24	Q9BUV8	137 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	ELOVL1	Q9BW60	279 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	SDF2L1	Q9HCN8	221 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	SERTAD4	Q9NUC0	356 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	ZNF586	Q9NXT0	402 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	NAT8	Q9UHE5	227 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	RNF24	Q9Y225	148 aa		5.77	□□□□□ -1.49
TPM1-231	ENST00000561395	TRBV19	A0A075B6N1	114 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	IGHV3OR16-8	A0A075B7F1	116 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	C7orf77	A4D0Y5	90 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	FAM181B	A6NEQ2	426 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395		B4DEV8	164 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	NDUFA4	O00483	81 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	PEX7	O00628	323 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	PRB2	P02812	416 aa	Predicted RBP	5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	SNRPC	P09234	159 aa	Known RBP	5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	RPL7	P18124	248 aa	Known RBP	5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	LOR	P23490	312 aa	Predicted RBP	5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	CRYBB3	P26998	211 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	AKR1C3	P42330	323 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	SUMO1	P63165	101 aa	Known RBP	5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	TMEM241	Q24JQ0	296 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	BEAN1	Q3B7T3	259 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	TMEM88	Q6PEY1	159 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	CBLN2	Q8IUK8	224 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	C2CD4C	Q8TF44	421 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	METTL26	Q96S19	204 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	KRTAP17-1	Q9BYP8	105 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395		Q9H3A6	140 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	RPS10P5	Q9NQ39	176 aa		5.76	□□□□□ -1.49
TPM1-231	ENST00000561395	TRBV20OR9-2	A0A075B6H5	130 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395		A0A087WWC5	75 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	PGP	A6NDG6	321 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395		C9JCJ5	164 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395		H3BTX0	84 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	GGCT	O75223	188 aa	Known RBP	5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	RPL35	P42766	123 aa	Known RBP	5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	RAN	P62826	216 aa	Known RBP	5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	RPL23	P62829	140 aa	Known RBP	5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	PDE6H	Q13956	83 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	ADIRF	Q15847	76 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	C1orf194	Q5T5A4	169 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395		Q6ZSV7	163 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	LYPD1	Q8N2G4	141 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	C5orf17	Q8NAS9	161 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	GPR82	Q96P67	336 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	OTOR	Q9NRC9	128 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	SMCO4	Q9NRQ5	59 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395	PEF1	Q9UBV8	284 aa	Known RBP	5.75	□□□□□ -1.49
TPM1-231	ENST00000561395		U3KQE9	123 aa		5.75	□□□□□ -1.49
TPM1-231	ENST00000561395		A0A087X0K7	114 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	HELT	A6NFD8	242 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395		G3V4G9	280 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	SLC17A3	O00476	420 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	ZNF207	O43670	478 aa	Known RBP	5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	BUB3	O43684	328 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	NDUFA7	O95182	113 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	SLC25A5	P05141	298 aa	Known RBP	5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	LGALS1	P09382	135 aa	Known RBP	5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	CNN1	P51911	297 aa	Known RBP	5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	GNG5	P63218	68 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	CENPW	Q5EE01	88 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	UNQ9165/PRO28630	Q6UXU0	137 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	SIGLEC15	Q6ZMC9	328 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	LINC01551	Q86U37	167 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	OR8I2	Q8N0Y5	310 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	EXOC3-AS1	Q8N2X6	119 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	MRAP	Q8TCY5	172 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	HIST1H2BA	Q96A08	127 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	UBE2E2	Q96LR5	201 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	IGF2BP2-AS1	Q96M15	143 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	C17orf77	Q96MU5	243 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	CLUHP3	Q96NS8	147 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	OR5B12	Q96R08	314 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	ATG101	Q9BSB4	218 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	EPDR1	Q9UM22	224 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	RNF114	Q9Y508	228 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	SMAD5-AS1	Q9Y6J3	95 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	LY96	Q9Y6Y9	160 aa		5.74	□□□□□ -1.49
TPM1-231	ENST00000561395	DNAH3	Q8TD57	4116 aa		5.73	□□□□□ -1.49
TPM1-231	ENST00000561395	PGPEP1L	A6NFU8	196 aa		5.73	□□□□□ -1.49
TPM1-231	ENST00000561395	TSPAN4	O14817	238 aa		5.73	□□□□□ -1.49
TPM1-231	ENST00000561395	ZNF253	O75346	499 aa		5.73	□□□□□ -1.49
TPM1-231	ENST00000561395	APOH	P02749	345 aa	Predicted RBP	5.73	□□□□□ -1.49

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