RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 SLC24A4Q8NFF2 622 aa8.45□□□□□ -1.06
CARMIL3-204ENST00000561354 HEYLQ9NQ87 328 aaPredicted RBP8.45□□□□□ -1.06
CARMIL3-204ENST00000561354 CACNG5Q9UF02 275 aa8.45□□□□□ -1.06
CARMIL3-204ENST00000561354 TEX48A0A1B0GUV7 120 aa8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 RAB19A4D1S5 217 aa8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 KRBOX1C9JBD0 128 aa8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 TOMM40O96008 361 aa8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 RD3LP0DJH9 198 aa8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 CAV2P51636 162 aa8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 POLR2GP62487 172 aaKnown RBP eCLIP8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 BLOC1S1P78537 153 aa8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 TOR2AQ5JU69 321 aa8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 RPL7L1Q6DKI1 246 aaKnown RBP8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 CLUHP3Q96NS8 147 aa8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 DNAH11Q96DT5 4516 aa8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 DNAH17Q9UFH2 4485 aa8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 DYNC1H1Q14204 4646 aaKnown RBP8.44□□□□□ -1.06
CARMIL3-204ENST00000561354 TEX46H3BTG2 121 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 SYNGR2O43760 224 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 SULT1A1P50225 295 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 SULT1A2P50226 295 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 RNF212Q495C1 297 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 SOHLH1Q5JUK2 328 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 FAM74A1Q5RGS3 127 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 UBE2DNLQ8IWF7 75 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 TMEM252Q8N6L7 170 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 TMEM170AQ8WVE7 144 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 TMED6Q8WW62 240 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 NPIPB3Q92617 1050 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 GNPNAT1Q96EK6 184 aaPredicted RBP8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 SMIM8Q96KF7 97 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 CIB3Q96Q77 187 aaPredicted RBP8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 DKK2Q9UBU2 259 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 HSPB7Q9UBY9 170 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 STRAPQ9Y3F4 350 aaKnown RBP8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 RFNGQ9Y644 331 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 RYR1P21817 5038 aa8.43□□□□□ -1.06
CARMIL3-204ENST00000561354 IGLV2-18A0A075B6J9 118 aa8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 CEBPZOSA8MTT3 80 aa8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 NXPH3O95157 252 aa8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 PSG1P11464 419 aa8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 EMP1P54849 157 aa8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 HBG1P69891 147 aa8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 HBG2P69892 147 aa8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 GDF5OSQ5U4N7 250 aa8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 FOXI2Q6ZQN5 318 aa8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 CCDC28AQ8IWP9 274 aa8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 PCNPQ8WW12 178 aaKnown RBP8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 ATP5SQ99766 215 aa8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 NIPSNAP3BQ9BS92 247 aa8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 SAV1Q9H4B6 383 aaPredicted RBP8.42□□□□□ -1.06
CARMIL3-204ENST00000561354 PKHD1P08F94 4074 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 IGSF23A1L1A6 192 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 FAM24AA6NFZ4 105 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 UMAD1C9J7I0 102 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 ID1P41134 155 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 FAM222AQ5U5X8 452 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 SPATA31B1PQ5VZV4 182 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 OR8G2PQ6IF36 304 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 DPPA3Q6W0C5 159 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 ZNF709Q8N972 641 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 OR51G1Q8NGK1 321 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 RNF125Q96EQ8 232 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 ACY3Q96HD9 319 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 PARD6GQ9BYG4 376 aaPredicted RBP8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 SMIM3Q9BZL3 60 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 MAGT1Q9H0U3 335 aa8.41□□□□□ -1.06
CARMIL3-204ENST00000561354 IGHV3OR16-12A0A075B7B8 117 aa8.4□□□□□ -1.06
CARMIL3-204ENST00000561354 IGKV3-20P01619 116 aa8.4□□□□□ -1.06
CARMIL3-204ENST00000561354 PSMB3P49720 205 aa8.4□□□□□ -1.06
CARMIL3-204ENST00000561354 PAX9P55771 341 aa8.4□□□□□ -1.06
CARMIL3-204ENST00000561354 FXYD7P58549 80 aa8.4□□□□□ -1.06
CARMIL3-204ENST00000561354 RPP30P78346 268 aaKnown RBP8.4□□□□□ -1.06
CARMIL3-204ENST00000561354 NHLH2Q02577 135 aa8.4□□□□□ -1.06
CARMIL3-204ENST00000561354 ZNF575Q86XF7 245 aa8.4□□□□□ -1.06
CARMIL3-204ENST00000561354 OR5C1Q8NGR4 320 aa8.4□□□□□ -1.06
CARMIL3-204ENST00000561354 LINC00052Q96N35 136 aa8.4□□□□□ -1.06
CARMIL3-204ENST00000561354 PSENENQ9NZ42 101 aa8.4□□□□□ -1.06
CARMIL3-204ENST00000561354 SOCS3O14543 225 aa8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 IFNA5P01569 189 aa8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 FAM3BP58499 235 aaPredicted RBP8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 DEFB1P60022 68 aa8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 PSG9Q00887 426 aa8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 ATP6V1FQ16864 119 aa8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 C1orf194Q5T5A4 169 aa8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 C1orf134Q5TEV5 83 aa8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 OR4B1Q8NGF8 309 aa8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 KRTAP4-5Q9BYR2 181 aa8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 GOLT1BQ9Y3E0 138 aa8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 YTHDF2Q9Y5A9 579 aaKnown RBP8.39□□□□□ -1.07
CARMIL3-204ENST00000561354 HBE1P02100 147 aa8.38□□□□□ -1.07
CARMIL3-204ENST00000561354 ATP5IP56385 69 aaPredicted RBP8.38□□□□□ -1.07
CARMIL3-204ENST00000561354 PXDC1Q5TGL8 231 aa8.38□□□□□ -1.07
CARMIL3-204ENST00000561354 TMEM14EPQ6UXP3 125 aa8.38□□□□□ -1.07
CARMIL3-204ENST00000561354 C1orf158Q8N1D5 194 aa8.38□□□□□ -1.07
CARMIL3-204ENST00000561354 LYPD6BQ8NI32 183 aa8.38□□□□□ -1.07
CARMIL3-204ENST00000561354 PBDC1Q9BVG4 233 aa8.38□□□□□ -1.07
CARMIL3-204ENST00000561354 SLC35B3Q9H1N7 401 aa8.38□□□□□ -1.07
CARMIL3-204ENST00000561354 RBKSQ9H477 322 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms