RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ERBINQ96RT1 1412 aa-0.04□□□□□ -2.42
USP8-218ENST00000561330 HMGB3O15347 200 aaKnown RBP-0.04□□□□□ -2.42
USP8-218ENST00000561330 CCL4P13236 92 aa-0.04□□□□□ -2.42
USP8-218ENST00000561330 CYBAP13498 195 aa-0.04□□□□□ -2.42
USP8-218ENST00000561330 PATE2Q6UY27 113 aa-0.04□□□□□ -2.42
USP8-218ENST00000561330 Q6ZQY7 126 aa-0.04□□□□□ -2.42
USP8-218ENST00000561330 GOLT1AQ6ZVE7 132 aa-0.04□□□□□ -2.42
USP8-218ENST00000561330 S100A7AQ86SG5 101 aa-0.04□□□□□ -2.42
USP8-218ENST00000561330 OR4K15Q8NH41 348 aa-0.04□□□□□ -2.42
USP8-218ENST00000561330 CHCHD1Q96BP2 118 aaKnown RBP-0.04□□□□□ -2.42
USP8-218ENST00000561330 NABP2Q9BQ15 211 aa-0.04□□□□□ -2.42
USP8-218ENST00000561330 FAM32AQ9Y421 112 aaKnown RBP-0.04□□□□□ -2.42
USP8-218ENST00000561330 TPRP12270 2363 aaKnown RBP-0.04□□□□□ -2.42
USP8-218ENST00000561330 IGSF10Q6WRI0 2623 aa-0.04□□□□□ -2.42
USP8-218ENST00000561330 NCOR2Q9Y618 2525 aa-0.05□□□□□ -2.42
USP8-218ENST00000561330 FXYD4P59646 89 aa-0.05□□□□□ -2.42
USP8-218ENST00000561330 OR10X1Q8NGY0 326 aa-0.05□□□□□ -2.42
USP8-218ENST00000561330 HYLS1Q96M11 299 aa-0.05□□□□□ -2.42
USP8-218ENST00000561330 ENY2Q9NPA8 101 aa-0.05□□□□□ -2.42
USP8-218ENST00000561330 COL7A1Q02388 2944 aa-0.05□□□□□ -2.42
USP8-218ENST00000561330 PTPRDP23468 1912 aa-0.05□□□□□ -2.42
USP8-218ENST00000561330 BCORL1Q5H9F3 1711 aa-0.06□□□□□ -2.42
USP8-218ENST00000561330 MYLKQ15746 1914 aa-0.06□□□□□ -2.42
USP8-218ENST00000561330 QRFPP83859 136 aa-0.06□□□□□ -2.42
USP8-218ENST00000561330 EIF3IQ13347 325 aaKnown RBP-0.06□□□□□ -2.42
USP8-218ENST00000561330 TMEM14EPQ6UXP3 125 aa-0.06□□□□□ -2.42
USP8-218ENST00000561330 Q86TA4 180 aa-0.06□□□□□ -2.42
USP8-218ENST00000561330 LRRC18Q8N456 261 aa-0.06□□□□□ -2.42
USP8-218ENST00000561330 ZNF714Q96N38 554 aa-0.06□□□□□ -2.42
USP8-218ENST00000561330 ZFYVE26Q68DK2 2539 aa-0.06□□□□□ -2.42
USP8-218ENST00000561330 BDP1A6H8Y1 2624 aa-0.06□□□□□ -2.42
USP8-218ENST00000561330 DOCK4Q8N1I0 1966 aa-0.06□□□□□ -2.42
USP8-218ENST00000561330 OTOGQ6ZRI0 2925 aa-0.07□□□□□ -2.42
USP8-218ENST00000561330 CD3DP04234 171 aa-0.07□□□□□ -2.42
USP8-218ENST00000561330 TAF1AQ15573 450 aaPredicted RBP-0.07□□□□□ -2.42
USP8-218ENST00000561330 OCIAD2Q56VL3 154 aa-0.07□□□□□ -2.42
USP8-218ENST00000561330 PLAC4Q8WY50 150 aa-0.07□□□□□ -2.42
USP8-218ENST00000561330 POPDC3Q9HBV1 291 aa-0.07□□□□□ -2.42
USP8-218ENST00000561330 HRNRQ86YZ3 2850 aaPredicted RBP-0.07□□□□□ -2.42
USP8-218ENST00000561330 MGAMO43451 1857 aa-0.07□□□□□ -2.42
USP8-218ENST00000561330 TRPM1Q7Z4N2 1603 aa-0.08□□□□□ -2.42
USP8-218ENST00000561330 NFYBP25208 207 aa-0.08□□□□□ -2.42
USP8-218ENST00000561330 BOKQ9UMX3 212 aaPredicted RBP-0.08□□□□□ -2.42
USP8-218ENST00000561330 CACNA1CQ13936 2221 aa-0.08□□□□□ -2.42
USP8-218ENST00000561330 LRP1Q07954 4544 aaKnown RBP-0.08□□□□□ -2.42
USP8-218ENST00000561330 NINQ8N4C6 2090 aa-0.09□□□□□ -2.42
USP8-218ENST00000561330 NCAPD3P42695 1498 aa-0.09□□□□□ -2.42
USP8-218ENST00000561330 CEP164Q9UPV0 1460 aa-0.09□□□□□ -2.42
USP8-218ENST00000561330 COL24A1Q17RW2 1714 aa-0.09□□□□□ -2.42
USP8-218ENST00000561330 PCF11O94913 1555 aaKnown RBP-0.09□□□□□ -2.42
USP8-218ENST00000561330 hDV103S1A0JD37 113 aa-0.09□□□□□ -2.42
USP8-218ENST00000561330 BANF1O75531 89 aa-0.09□□□□□ -2.42
USP8-218ENST00000561330 CRHP06850 196 aa-0.09□□□□□ -2.42
USP8-218ENST00000561330 ERVS71-1P61550 626 aa-0.09□□□□□ -2.42
USP8-218ENST00000561330 PXT1Q8NFP0 134 aa-0.09□□□□□ -2.42
USP8-218ENST00000561330 CCL19Q99731 98 aa-0.09□□□□□ -2.42
USP8-218ENST00000561330 NISCHQ9Y2I1 1504 aa-0.09□□□□□ -2.42
USP8-218ENST00000561330 AHCTF1Q8WYP5 2266 aa-0.1□□□□□ -2.42
USP8-218ENST00000561330 ASXL3Q9C0F0 2248 aa-0.1□□□□□ -2.43
USP8-218ENST00000561330 C9orf170A2RU37 121 aa-0.1□□□□□ -2.43
USP8-218ENST00000561330 HSPE1P61604 102 aaKnown RBP-0.1□□□□□ -2.43
USP8-218ENST00000561330 KLRD1Q13241 179 aa-0.1□□□□□ -2.43
USP8-218ENST00000561330 CACYBPQ9HB71 228 aaKnown RBP-0.1□□□□□ -2.43
USP8-218ENST00000561330 NUP98P52948 1817 aa-0.1□□□□□ -2.43
USP8-218ENST00000561330 ATG2AQ2TAZ0 1938 aa-0.11□□□□□ -2.43
USP8-218ENST00000561330 NUP210LQ5VU65 1888 aa-0.11□□□□□ -2.43
USP8-218ENST00000561330 A0A096LPI6 279 aa-0.11□□□□□ -2.43
USP8-218ENST00000561330 GPR31O00270 319 aa-0.11□□□□□ -2.43
USP8-218ENST00000561330 C1QBP02746 253 aa-0.11□□□□□ -2.43
USP8-218ENST00000561330 CST2P09228 141 aa-0.11□□□□□ -2.43
USP8-218ENST00000561330 LINC00299Q6ZSB3 139 aa-0.11□□□□□ -2.43
USP8-218ENST00000561330 IFT20Q8IY31 132 aa-0.11□□□□□ -2.43
USP8-218ENST00000561330 PPTC7Q8NI37 304 aa-0.11□□□□□ -2.43
USP8-218ENST00000561330 ZHX1-C8orf76Q96EF9 292 aa-0.11□□□□□ -2.43
USP8-218ENST00000561330 ABCA4P78363 2273 aa-0.12□□□□□ -2.43
USP8-218ENST00000561330 CACNA1HO95180 2353 aa-0.12□□□□□ -2.43
USP8-218ENST00000561330 UBR5O95071 2799 aaPredicted RBP-0.12□□□□□ -2.43
USP8-218ENST00000561330 DUXBA0A1W2PPF3 345 aa-0.12□□□□□ -2.43
USP8-218ENST00000561330 SERPINA1P01009 418 aa-0.12□□□□□ -2.43
USP8-218ENST00000561330 IFNA4P05014 189 aa-0.12□□□□□ -2.43
USP8-218ENST00000561330 NCALDP61601 193 aa-0.12□□□□□ -2.43
USP8-218ENST00000561330 PRR15Q8IV56 129 aa-0.12□□□□□ -2.43
USP8-218ENST00000561330 RMND5BQ96G75 393 aaPredicted RBP-0.12□□□□□ -2.43
USP8-218ENST00000561330 C9orf16Q9BUW7 83 aa-0.12□□□□□ -2.43
USP8-218ENST00000561330 ARL2BPQ9Y2Y0 163 aa-0.12□□□□□ -2.43
USP8-218ENST00000561330 F8P00451 2351 aa-0.12□□□□□ -2.43
USP8-218ENST00000561330 MIA2Q96PC5 1412 aa-0.13□□□□□ -2.43
USP8-218ENST00000561330 TRPM7Q96QT4 1865 aa-0.13□□□□□ -2.43
USP8-218ENST00000561330 RBBP6Q7Z6E9 1792 aaKnown RBP-0.13□□□□□ -2.43
USP8-218ENST00000561330 SPINK1P00995 79 aa-0.13□□□□□ -2.43
USP8-218ENST00000561330 IGHV3-33P01772 117 aa-0.13□□□□□ -2.43
USP8-218ENST00000561330 CXCL1P09341 107 aa-0.13□□□□□ -2.43
USP8-218ENST00000561330 TMBIM6P55061 237 aa-0.13□□□□□ -2.43
USP8-218ENST00000561330 ARPP19P56211 112 aa-0.13□□□□□ -2.43
USP8-218ENST00000561330 AKIRIN2Q53H80 203 aa-0.13□□□□□ -2.43
USP8-218ENST00000561330 MYO7AQ13402 2215 aa-0.13□□□□□ -2.43
USP8-218ENST00000561330 ABCA12Q86UK0 2595 aa-0.13□□□□□ -2.43
USP8-218ENST00000561330 N4BP2Q86UW6 1770 aaPredicted RBP-0.14□□□□□ -2.43
USP8-218ENST00000561330 UBR2Q8IWV8 1755 aa-0.14□□□□□ -2.43
USP8-218ENST00000561330 CELSR1Q9NYQ6 3014 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms