RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SIGLEC15Q6ZMC9 328 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 C8orf86Q6ZUL3 223 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 CYB561D1Q8N8Q1 229 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 LINC00052Q96N35 136 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 RHPN1-AS1Q9BWJ2 59 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 Q9H3A6 140 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 CLEC5AQ9NY25 188 aa7.87□□□□□ -1.15
USP3-219ENST00000561326 TEP1Q99973 2627 aaKnown RBP7.86□□□□□ -1.15
USP3-219ENST00000561326 A0A087X0K7 114 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 ZNF727A8MUV8 499 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 K7EQM0 130 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 CHEK1O14757 476 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 NDUFB4O95168 129 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 SLC25A5P05141 298 aaKnown RBP7.86□□□□□ -1.15
USP3-219ENST00000561326 S100A9P06702 114 aaKnown RBP7.86□□□□□ -1.15
USP3-219ENST00000561326 CBLN1P23435 193 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 CSN1S1P47710 185 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 RPL11P62913 178 aaKnown RBP7.86□□□□□ -1.15
USP3-219ENST00000561326 SRSF2Q01130 221 aaKnown RBP7.86□□□□□ -1.15
USP3-219ENST00000561326 DEFB136Q30KP8 78 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 SAMD13Q5VXD3 122 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 C18orf65Q6ZTR6 163 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 NDUFA11Q86Y39 141 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 CCDC28AQ8IWP9 274 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 SVBPQ8N300 66 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 C5orf17Q8NAS9 161 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 GLMPQ8WWB7 406 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 HIST1H2BAQ96A08 127 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 SMIM7Q9BQ49 75 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 SLC50A1Q9BRV3 221 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 NIPSNAP3BQ9BS92 247 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 PRELID1Q9Y255 219 aa7.86□□□□□ -1.15
USP3-219ENST00000561326 CARHSP1Q9Y2V2 147 aaKnown RBP7.86□□□□□ -1.15
USP3-219ENST00000561326 GGTLC3B5MD39 225 aa7.85□□□□□ -1.15
USP3-219ENST00000561326 H3BTX0 84 aa7.85□□□□□ -1.15
USP3-219ENST00000561326 SNRPCP09234 159 aaKnown RBP7.85□□□□□ -1.15
USP3-219ENST00000561326 MYCNOSP40205 109 aa7.85□□□□□ -1.15
USP3-219ENST00000561326 SLURP1P55000 103 aa7.85□□□□□ -1.15
USP3-219ENST00000561326 TMEM241Q24JQ0 296 aa7.85□□□□□ -1.15
USP3-219ENST00000561326 ZNF674Q2M3X9 581 aa7.85□□□□□ -1.15
USP3-219ENST00000561326 ARL6IP6Q8N6S5 226 aa7.85□□□□□ -1.15
USP3-219ENST00000561326 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.85□□□□□ -1.15
USP3-219ENST00000561326 OR9G4Q8NGQ1 327 aa7.85□□□□□ -1.15
USP3-219ENST00000561326 C11orf52Q96A22 123 aa7.85□□□□□ -1.15
USP3-219ENST00000561326 RAX2Q96IS3 184 aa7.85□□□□□ -1.15
USP3-219ENST00000561326 EPDR1Q9UM22 224 aa7.85□□□□□ -1.15
USP3-219ENST00000561326 SMAD5-AS1Q9Y6J3 95 aa7.85□□□□□ -1.15
USP3-219ENST00000561326 TMEM213A2RRL7 107 aa7.84□□□□□ -1.15
USP3-219ENST00000561326 C2orf70A6NJV1 201 aa7.84□□□□□ -1.15
USP3-219ENST00000561326 PEX7O00628 323 aa7.84□□□□□ -1.15
USP3-219ENST00000561326 SNAPINO95295 136 aa7.84□□□□□ -1.15
USP3-219ENST00000561326 FOLR2P14207 255 aa7.84□□□□□ -1.15
USP3-219ENST00000561326 CNN1P51911 297 aaKnown RBP7.84□□□□□ -1.15
USP3-219ENST00000561326 PAFAH1B2P68402 229 aa7.84□□□□□ -1.15
USP3-219ENST00000561326 NSUN5P1Q3KNT7 163 aa7.84□□□□□ -1.15
USP3-219ENST00000561326 FAM90A2PQ658T7 463 aa7.84□□□□□ -1.15
USP3-219ENST00000561326 TCF24Q7RTU0 167 aa7.84□□□□□ -1.15
USP3-219ENST00000561326 TVP23CQ96ET8 276 aa7.84□□□□□ -1.15
USP3-219ENST00000561326 C17orf77Q96MU5 243 aa7.84□□□□□ -1.15
USP3-219ENST00000561326 NAT8Q9UHE5 227 aa7.84□□□□□ -1.15
USP3-219ENST00000561326 SERTM2A0A1B0GWG4 89 aa7.83□□□□□ -1.16
USP3-219ENST00000561326 SCO2A0A1W2PP80 73 aa7.83□□□□□ -1.16
USP3-219ENST00000561326 ID1P41134 155 aa7.83□□□□□ -1.16
USP3-219ENST00000561326 AKR1C3P42330 323 aa7.83□□□□□ -1.16
USP3-219ENST00000561326 TAS2R60P59551 318 aa7.83□□□□□ -1.16
USP3-219ENST00000561326 PNRC1Q12796 327 aaPredicted RBP7.83□□□□□ -1.16
USP3-219ENST00000561326 FHL3Q13643 280 aa7.83□□□□□ -1.16
USP3-219ENST00000561326 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.83□□□□□ -1.16
USP3-219ENST00000561326 EXOC3-AS1Q8N2X6 119 aa7.83□□□□□ -1.16
USP3-219ENST00000561326 DLX4Q92988 240 aaPredicted RBP7.83□□□□□ -1.16
USP3-219ENST00000561326 C16orf92Q96LL3 132 aa7.83□□□□□ -1.16
USP3-219ENST00000561326 DUX3Q96PT4 197 aa7.83□□□□□ -1.16
USP3-219ENST00000561326 ATG101Q9BSB4 218 aa7.83□□□□□ -1.16
USP3-219ENST00000561326 PARLQ9H300 379 aa7.83□□□□□ -1.16
USP3-219ENST00000561326 ZNF331Q9NQX6 463 aaPredicted RBP7.83□□□□□ -1.16
USP3-219ENST00000561326 SORL1Q92673 2214 aa7.82□□□□□ -1.16
USP3-219ENST00000561326 FBLL1A6NHQ2 334 aaKnown RBP7.82□□□□□ -1.16
USP3-219ENST00000561326 B4DEV8 164 aa7.82□□□□□ -1.16
USP3-219ENST00000561326 M0R036 132 aa7.82□□□□□ -1.16
USP3-219ENST00000561326 DNASE2O00115 360 aaPredicted RBP7.82□□□□□ -1.16
USP3-219ENST00000561326 OVOL1O14753 267 aa7.82□□□□□ -1.16
USP3-219ENST00000561326 TCRAP04437 139 aa7.82□□□□□ -1.16
USP3-219ENST00000561326 ADCYAP1P18509 176 aa7.82□□□□□ -1.16
USP3-219ENST00000561326 RPL35P42766 123 aaKnown RBP7.82□□□□□ -1.16
USP3-219ENST00000561326 UBE2G1P62253 170 aa7.82□□□□□ -1.16
USP3-219ENST00000561326 AWAT1Q58HT5 328 aa7.82□□□□□ -1.16
USP3-219ENST00000561326 MRPL53Q96EL3 112 aaKnown RBP7.82□□□□□ -1.16
USP3-219ENST00000561326 NRN1Q9NPD7 142 aa7.82□□□□□ -1.16
USP3-219ENST00000561326 MLXQ9UH92 298 aa7.82□□□□□ -1.16
USP3-219ENST00000561326 RPH3ALQ9UNE2 315 aa7.82□□□□□ -1.16
USP3-219ENST00000561326 SLC17A3O00476 420 aa7.81□□□□□ -1.16
USP3-219ENST00000561326 ISLRO14498 428 aa7.81□□□□□ -1.16
USP3-219ENST00000561326 GNG4P50150 75 aa7.81□□□□□ -1.16
USP3-219ENST00000561326 GUCA2BQ16661 112 aa7.81□□□□□ -1.16
USP3-219ENST00000561326 LCN12Q6JVE5 192 aa7.81□□□□□ -1.16
USP3-219ENST00000561326 RBPMS2Q6ZRY4 209 aaKnown RBP7.81□□□□□ -1.16
USP3-219ENST00000561326 LURAP1LQ8IV03 231 aa7.81□□□□□ -1.16
USP3-219ENST00000561326 DYNLRB2Q8TF09 96 aa7.81□□□□□ -1.16
USP3-219ENST00000561326 C2CD4CQ8TF44 421 aa7.81□□□□□ -1.16
USP3-219ENST00000561326 FMC1Q96HJ9 113 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms