RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 PINX1Q96BK5 328 aaKnown RBP4.44□□□□□ -1.7
LRRC28-220ENST00000561253 ZC4H2Q9NQZ6 224 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 PSENENQ9NZ42 101 aa4.44□□□□□ -1.7
LRRC28-220ENST00000561253 STRAPQ9Y3F4 350 aaKnown RBP4.44□□□□□ -1.7
LRRC28-220ENST00000561253 A0A087WZ39 114 aa4.43□□□□□ -1.7
LRRC28-220ENST00000561253 IGLV1-51P01701 117 aa4.43□□□□□ -1.7
LRRC28-220ENST00000561253 IFNA4P05014 189 aa4.43□□□□□ -1.7
LRRC28-220ENST00000561253 OR10J1P30954 320 aa4.43□□□□□ -1.7
LRRC28-220ENST00000561253 YPEL3P61236 119 aaPredicted RBP4.43□□□□□ -1.7
LRRC28-220ENST00000561253 RPEL1Q2QD12 228 aa4.43□□□□□ -1.7
LRRC28-220ENST00000561253 TIGITQ495A1 244 aa4.43□□□□□ -1.7
LRRC28-220ENST00000561253 TOMM20LQ6UXN7 152 aa4.43□□□□□ -1.7
LRRC28-220ENST00000561253 ZNF600Q6ZNG1 722 aa4.43□□□□□ -1.7
LRRC28-220ENST00000561253 TMEM144Q7Z5S9 345 aa4.43□□□□□ -1.7
LRRC28-220ENST00000561253 ASB13Q8WXK3 278 aa4.43□□□□□ -1.7
LRRC28-220ENST00000561253 TRGV9Q99603 122 aa4.43□□□□□ -1.7
LRRC28-220ENST00000561253 OPRPNQ99935 248 aaPredicted RBP4.43□□□□□ -1.7
LRRC28-220ENST00000561253 MED28Q9H204 178 aa4.43□□□□□ -1.7
LRRC28-220ENST00000561253 LSM5Q9Y4Y9 91 aaKnown RBP4.43□□□□□ -1.7
LRRC28-220ENST00000561253 IGLV7-46A0A075B6I9 117 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 IGHV3OR16-8A0A075B7F1 116 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 A0A1B0GVG6 124 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 WI2-2373I1.2A0A1W2PRP0 233 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 IZUMO1RA6ND01 250 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 SEC14L6B5MCN3 397 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 K7EMT4 169 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 NUPL2O15504 423 aaKnown RBP4.42□□□□□ -1.7
LRRC28-220ENST00000561253 GNG7O60262 68 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 CST7O76096 145 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 CRYBB3P26998 211 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 P2RY1P47900 373 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 SULT1A1P50225 295 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 INSL3P51460 131 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 S100A10P60903 97 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 RAB11AP62491 216 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 EWSR1Q01844 656 aaKnown RBP eCLIP4.42□□□□□ -1.7
LRRC28-220ENST00000561253 ZNF90Q03938 601 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 USF2Q15853 346 aaPredicted RBP4.42□□□□□ -1.7
LRRC28-220ENST00000561253 LRRC37A5PQ49AS3 106 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 FAM106AQ4KMX7 169 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 Q56UQ5 140 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 ETFRF1Q6IPR1 90 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 Q6ZRP5 223 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 OR1S2Q8NGQ3 325 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 ACY3Q96HD9 319 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 GGACTQ9BVM4 153 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 VSIRQ9H7M9 311 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 DAZ1Q9NQZ3 744 aaKnown RBP4.42□□□□□ -1.7
LRRC28-220ENST00000561253 MBD2Q9UBB5 411 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 MLXQ9UH92 298 aa4.42□□□□□ -1.7
LRRC28-220ENST00000561253 PUS1Q9Y606 427 aaKnown RBP eCLIP4.42□□□□□ -1.7
LRRC28-220ENST00000561253 TRAV30A0A087WSZ9 112 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 RNF222A6NCQ9 220 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 LINC00869P0C866 280 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 FOLR2P14207 255 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 CBLN1P23435 193 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 CAV2P51636 162 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 PLP1P60201 277 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 SLC38A11Q08AI6 406 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 DEFB114Q30KQ6 69 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 C9orf66Q5T8R8 295 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 OR8G2PQ6IF36 304 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 UBAC2Q8NBM4 344 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 OR10P1Q8NGE3 313 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 SLC35E1Q96K37 410 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 FAM218AQ96MZ4 157 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 AQP10Q96PS8 301 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 MGST2Q99735 147 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 MCRIP2Q9BUT9 160 aaKnown RBP4.41□□□□□ -1.7
LRRC28-220ENST00000561253 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 WFDC1Q9HC57 220 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 SMPXQ9UHP9 88 aa4.41□□□□□ -1.7
LRRC28-220ENST00000561253 DYNC2H1Q8NCM8 4307 aaKnown RBP4.41□□□□□ -1.7
LRRC28-220ENST00000561253 IGHV7-4-1A0A0J9YVY3 117 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 L7N2F9 121 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 CHEK1O14757 476 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 RD3LP0DJH9 198 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 PVALBP20472 110 aaPredicted RBP4.4□□□□□ -1.71
LRRC28-220ENST00000561253 GATA2P23769 480 aaPredicted RBP4.4□□□□□ -1.71
LRRC28-220ENST00000561253 RPL12P30050 165 aaKnown RBP4.4□□□□□ -1.71
LRRC28-220ENST00000561253 S100A11P31949 105 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 BAXQ07812 192 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 PATE2Q6UY27 113 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 TMEM61Q8N0U2 210 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 OR2T35Q8NGX2 323 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 MARC2Q969Z3 335 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 TMEM147Q9BVK8 224 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 GGTLC1Q9BX51 225 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 MRPL27Q9P0M9 148 aaKnown RBP4.4□□□□□ -1.71
LRRC28-220ENST00000561253 PAIP2BQ9ULR5 123 aaKnown RBP4.4□□□□□ -1.71
LRRC28-220ENST00000561253 TNFSF18Q9UNG2 199 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 ZNF256Q9Y2P7 627 aaPredicted RBP4.4□□□□□ -1.71
LRRC28-220ENST00000561253 UFC1Q9Y3C8 167 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 HSPB11Q9Y547 144 aa4.4□□□□□ -1.71
LRRC28-220ENST00000561253 CSMD3Q7Z407 3707 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 ZFP92A6NM28 416 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 SMLR1H3BR10 107 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 K7EIL1 84 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 AGPAT2O15120 278 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 ZNF207O43670 478 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms