RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 GGACTQ9BVM4 153 aa9.05□□□□□ -0.96
CHRNA3-208ENST00000561128 C1QTNF4Q9BXJ3 329 aa9.05□□□□□ -0.96
CHRNA3-208ENST00000561128 PARD6GQ9BYG4 376 aaPredicted RBP9.05□□□□□ -0.96
CHRNA3-208ENST00000561128 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 IGLL5B9A064 214 aa9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 COX7A2P2O60397 106 aa9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 RPL7P18124 248 aaKnown RBP9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 CAMLGP49069 296 aa9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 SULT1A1P50225 295 aa9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 NUTF2P61970 127 aaKnown RBP9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 NHLH2Q02577 135 aa9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 KIR3DS1Q14943 382 aa9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 LRRC37A5PQ49AS3 106 aa9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 NEU1Q99519 415 aa9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 ZNF331Q9NQX6 463 aaPredicted RBP9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 UQCC1Q9NVA1 299 aa9.04□□□□□ -0.96
CHRNA3-208ENST00000561128 INMT-MINDY4F8WBC2 141 aa9.03□□□□□ -0.96
CHRNA3-208ENST00000561128 IGLC2P0DOY2 106 aa9.03□□□□□ -0.96
CHRNA3-208ENST00000561128 HIST1H1AQ02539 215 aaPredicted RBP9.03□□□□□ -0.96
CHRNA3-208ENST00000561128 SPATA31B1PQ5VZV4 182 aa9.03□□□□□ -0.96
CHRNA3-208ENST00000561128 OR8A1Q8NGG7 326 aa9.03□□□□□ -0.96
CHRNA3-208ENST00000561128 C2CD4CQ8TF44 421 aa9.03□□□□□ -0.96
CHRNA3-208ENST00000561128 GPN1Q9HCN4 374 aaPredicted RBP9.03□□□□□ -0.96
CHRNA3-208ENST00000561128 IGHV4-4A0A075B6R2 117 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 TRAV10A0A0B4J240 114 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 PLAC8L1A1L4L8 177 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 ZNF705GA8MUZ8 300 aaPredicted RBP9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 FGF7P21781 194 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 BAXQ07812 192 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 PSG3Q16557 428 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 FAM222AQ5U5X8 452 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 C10orf113Q5VZT2 155 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 LGALS9CQ6DKI2 356 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 THAP6Q8TBB0 222 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 IGF2BP2-AS1Q96M15 143 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 MARVELD1Q9BSK0 173 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 SLC39A9Q9NUM3 307 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 DKK2Q9UBU2 259 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 YTHDF2Q9Y5A9 579 aaKnown RBP9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 PXMP4Q9Y6I8 212 aa9.02□□□□□ -0.97
CHRNA3-208ENST00000561128 LOC102723971A0A1B0GUV8 181 aa9.01□□□□□ -0.97
CHRNA3-208ENST00000561128 BOLA2-SMG1P6H3BVE0 249 aa9.01□□□□□ -0.97
CHRNA3-208ENST00000561128 AZU1P20160 251 aa9.01□□□□□ -0.97
CHRNA3-208ENST00000561128 PXDC1Q5TGL8 231 aa9.01□□□□□ -0.97
CHRNA3-208ENST00000561128 SAMD13Q5VXD3 122 aa9.01□□□□□ -0.97
CHRNA3-208ENST00000561128 RPUSD4Q96CM3 377 aaKnown RBP9.01□□□□□ -0.97
CHRNA3-208ENST00000561128 SAT2Q96F10 170 aaPredicted RBP9.01□□□□□ -0.97
CHRNA3-208ENST00000561128 ZNF586Q9NXT0 402 aa9.01□□□□□ -0.97
CHRNA3-208ENST00000561128 RFNGQ9Y644 331 aa9.01□□□□□ -0.97
CHRNA3-208ENST00000561128 DEFB131BA0A096LNP1 70 aa9□□□□□ -0.97
CHRNA3-208ENST00000561128 AMBPP02760 352 aa9□□□□□ -0.97
CHRNA3-208ENST00000561128 PYYP10082 97 aa9□□□□□ -0.97
CHRNA3-208ENST00000561128 PVALBP20472 110 aaPredicted RBP9□□□□□ -0.97
CHRNA3-208ENST00000561128 RPL29P47914 159 aaKnown RBP9□□□□□ -0.97
CHRNA3-208ENST00000561128 B2MP61769 119 aa9□□□□□ -0.97
CHRNA3-208ENST00000561128 CLINT1Q14677 625 aa9□□□□□ -0.97
CHRNA3-208ENST00000561128 RNF126Q9BV68 326 aa9□□□□□ -0.97
CHRNA3-208ENST00000561128 NPCDR1Q9BY65 106 aa9□□□□□ -0.97
CHRNA3-208ENST00000561128 GOLT1BQ9Y3E0 138 aa9□□□□□ -0.97
CHRNA3-208ENST00000561128 BIRC6Q9NR09 4857 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 C11orf94C9JXX5 98 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 M0R3E3 92 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 PRAF2O60831 178 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 EIF3GO75821 320 aaKnown RBP eCLIP8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 DUSP14O95147 198 aaKnown RBP8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 NDUFB4O95168 129 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 INSP01308 110 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 S100A11P31949 105 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 LCN15Q6UWW0 184 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 STX12Q86Y82 276 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 OR5C1Q8NGR4 320 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 NMES1Q9C002 83 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 DNAJC4Q9NNZ3 241 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 KMT2AQ03164 3969 aa8.99□□□□□ -0.97
CHRNA3-208ENST00000561128 SMIM9A6NGZ8 99 aa8.98□□□□□ -0.97
CHRNA3-208ENST00000561128 HBE1P02100 147 aa8.98□□□□□ -0.97
CHRNA3-208ENST00000561128 CXCL2P19875 107 aa8.98□□□□□ -0.97
CHRNA3-208ENST00000561128 RHOBP62745 196 aa8.98□□□□□ -0.97
CHRNA3-208ENST00000561128 FCN2Q15485 313 aa8.98□□□□□ -0.97
CHRNA3-208ENST00000561128 MIR17HGQ75NE6 70 aa8.98□□□□□ -0.97
CHRNA3-208ENST00000561128 BPIFA4PQ86YQ2 179 aa8.98□□□□□ -0.97
CHRNA3-208ENST00000561128 CHAC2Q8WUX2 184 aa8.98□□□□□ -0.97
CHRNA3-208ENST00000561128 PPP1R1CQ8WVI7 109 aa8.98□□□□□ -0.97
CHRNA3-208ENST00000561128 FAM167A-AS1Q96KT0 104 aa8.98□□□□□ -0.97
CHRNA3-208ENST00000561128 SLC25A2Q9BXI2 301 aa8.98□□□□□ -0.97
CHRNA3-208ENST00000561128 VPS13DQ5THJ4 4388 aa8.98□□□□□ -0.97
CHRNA3-208ENST00000561128 SPART-AS1P0CW21 52 aa8.97□□□□□ -0.97
CHRNA3-208ENST00000561128 HTN3P15516 51 aa8.97□□□□□ -0.97
CHRNA3-208ENST00000561128 HBG1P69891 147 aa8.97□□□□□ -0.97
CHRNA3-208ENST00000561128 HBG2P69892 147 aa8.97□□□□□ -0.97
CHRNA3-208ENST00000561128 RRN3P1Q2M238 152 aa8.97□□□□□ -0.97
CHRNA3-208ENST00000561128 LRRC20Q8TCA0 184 aa8.97□□□□□ -0.97
CHRNA3-208ENST00000561128 SLC50A1Q9BRV3 221 aa8.97□□□□□ -0.97
CHRNA3-208ENST00000561128 WFDC1Q9HC57 220 aa8.97□□□□□ -0.97
CHRNA3-208ENST00000561128 TRBV19A0A075B6N1 114 aa8.96□□□□□ -0.98
CHRNA3-208ENST00000561128 TMEM189A5PLL7 270 aa8.96□□□□□ -0.98
CHRNA3-208ENST00000561128 E5RGE8 158 aa8.96□□□□□ -0.98
CHRNA3-208ENST00000561128 J3KRW8 73 aa8.96□□□□□ -0.98
CHRNA3-208ENST00000561128 MPC2O95563 127 aa8.96□□□□□ -0.98
CHRNA3-208ENST00000561128 CT45A10P0DMU9 189 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms