RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 IGHV3OR16-8A0A075B7F1 116 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 LTAP01374 205 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 TRBV12-3P01733 135 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 RPS10P46783 165 aaKnown RBP9.93□□□□□ -0.82
SNX1-211ENST00000560829 FAM231DQ6ZW35 169 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 OR4X2Q8NGF9 303 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 V9GYV3 84 aa9.93□□□□□ -0.82
SNX1-211ENST00000560829 ITPR3Q14573 2671 aa9.92□□□□□ -0.82
SNX1-211ENST00000560829 ERVFC1-1P60608 527 aa9.92□□□□□ -0.82
SNX1-211ENST00000560829 IL17RELQ6ZVW7 336 aa9.92□□□□□ -0.82
SNX1-211ENST00000560829 MYOZ3Q8TDC0 251 aa9.92□□□□□ -0.82
SNX1-211ENST00000560829 BTF3L4Q96K17 158 aa9.92□□□□□ -0.82
SNX1-211ENST00000560829 AAMDCQ9H7C9 122 aa9.92□□□□□ -0.82
SNX1-211ENST00000560829 SERTM2A0A1B0GWG4 89 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 IGLV2-11P01706 119 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 IGHV3-11P01762 117 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 TYMSP04818 313 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 ELANEP08246 267 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 SLC35B1P78383 322 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 LCNL1Q6ZST4 164 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 RNF152Q8N8N0 203 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 TMEM75Q8N9X5 138 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 SRD5A3Q9H8P0 318 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 IL36BQ9NZH7 164 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 RPH3ALQ9UNE2 315 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 TRAV9-1A0A075B6T8 112 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 MGST1P10620 155 aaKnown RBP9.91□□□□□ -0.82
SNX1-211ENST00000560829 MEOX2P50222 304 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 FOXE3Q13461 319 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 IBA57Q5T440 356 aaKnown RBP9.91□□□□□ -0.82
SNX1-211ENST00000560829 GOLT1AQ6ZVE7 132 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 Q86TA4 180 aa9.91□□□□□ -0.82
SNX1-211ENST00000560829 ZNF331Q9NQX6 463 aaPredicted RBP9.91□□□□□ -0.82
SNX1-211ENST00000560829 ANK3Q12955 4377 aaKnown RBP9.91□□□□□ -0.82
SNX1-211ENST00000560829 GCN1Q92616 2671 aaKnown RBP9.9□□□□□ -0.82
SNX1-211ENST00000560829 A0A1W2PPQ1 181 aa9.9□□□□□ -0.82
SNX1-211ENST00000560829 DIRC3C9JPN6 131 aa9.9□□□□□ -0.82
SNX1-211ENST00000560829 APOHP02749 345 aaPredicted RBP9.9□□□□□ -0.82
SNX1-211ENST00000560829 C16orf54Q6UWD8 224 aa9.9□□□□□ -0.82
SNX1-211ENST00000560829 UNQ9165/PRO28630Q6UXU0 137 aa9.9□□□□□ -0.82
SNX1-211ENST00000560829 NHLRC2Q8NBF2 726 aa9.9□□□□□ -0.82
SNX1-211ENST00000560829 RNASE7Q9H1E1 156 aaKnown RBP9.9□□□□□ -0.82
SNX1-211ENST00000560829 PEF1Q9UBV8 284 aaKnown RBP9.9□□□□□ -0.82
SNX1-211ENST00000560829 ZNF320A2RRD8 509 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 K7EQM0 130 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 M0R3E3 92 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 FAM3BP58499 235 aaPredicted RBP9.89□□□□□ -0.83
SNX1-211ENST00000560829 C10orf99Q6UWK7 81 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 ZFP82Q8N141 532 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 BIN3Q9NQY0 253 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 TEX15Q9BXT5 2789 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 PHOX2AO14813 284 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 CSN1S1P47710 185 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 PSG3Q16557 428 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 TMEM183AQ8IXX5 376 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 GLMPQ8WWB7 406 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 SGK494Q96LW2 274 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 SLC50A1Q9BRV3 221 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 SERTAD4Q9NUC0 356 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 TMEM160Q9NX00 188 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 ZNF492Q9P255 531 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 ZFP30Q9Y2G7 519 aa9.89□□□□□ -0.83
SNX1-211ENST00000560829 MXRA5Q9NR99 2828 aa9.88□□□□□ -0.83
SNX1-211ENST00000560829 TRAV8-1A0A0A6YYK1 113 aa9.88□□□□□ -0.83
SNX1-211ENST00000560829 FBLL1A6NHQ2 334 aaKnown RBP9.88□□□□□ -0.83
SNX1-211ENST00000560829 ZNF785A8K8V0 405 aa9.88□□□□□ -0.83
SNX1-211ENST00000560829 ZNF207O43670 478 aaKnown RBP9.88□□□□□ -0.83
SNX1-211ENST00000560829 GPHB5Q86YW7 130 aa9.88□□□□□ -0.83
SNX1-211ENST00000560829 YAE1D1Q9NRH1 226 aa9.88□□□□□ -0.83
SNX1-211ENST00000560829 IGHV3-66A0A0C4DH42 116 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 K7EMT4 169 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 TRGC2P03986 189 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 RPLP1P05386 114 aaKnown RBP9.87□□□□□ -0.83
SNX1-211ENST00000560829 RPEL1Q2QD12 228 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 NUDT10Q8NFP7 164 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 NUDT11Q96G61 164 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 PSG8Q9UQ74 426 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 CCDC168Q8NDH2 2452 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 A0A1W2PS18 150 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 C19orf71A6NCJ1 209 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 DNAJC9-AS1A6NH13 148 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 UBE2E2Q96LR5 201 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 DUX5Q96PT3 197 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 ITPR2Q14571 2701 aa9.87□□□□□ -0.83
SNX1-211ENST00000560829 IGHV3OR16-13A0A075B7E8 117 aa9.86□□□□□ -0.83
SNX1-211ENST00000560829 IGHV3-49A0A0A0MS15 119 aa9.86□□□□□ -0.83
SNX1-211ENST00000560829 IGHV3-74A0A0B4J1X5 117 aa9.86□□□□□ -0.83
SNX1-211ENST00000560829 SMIM27A0A1W2PRY6 76 aa9.86□□□□□ -0.83
SNX1-211ENST00000560829 ZNF705GA8MUZ8 300 aaPredicted RBP9.86□□□□□ -0.83
SNX1-211ENST00000560829 CHEK1O14757 476 aa9.86□□□□□ -0.83
SNX1-211ENST00000560829 GATCO43716 136 aaKnown RBP9.86□□□□□ -0.83
SNX1-211ENST00000560829 LGALS1P09382 135 aaKnown RBP9.86□□□□□ -0.83
SNX1-211ENST00000560829 SCGB2A2Q13296 93 aa9.86□□□□□ -0.83
SNX1-211ENST00000560829 FAM106AQ4KMX7 169 aa9.86□□□□□ -0.83
SNX1-211ENST00000560829 COX8CQ7Z4L0 72 aa9.86□□□□□ -0.83
SNX1-211ENST00000560829 PRNTQ86SH4 94 aa9.86□□□□□ -0.83
SNX1-211ENST00000560829 MRPL53Q96EL3 112 aaKnown RBP9.86□□□□□ -0.83
SNX1-211ENST00000560829 GRAMD2BQ96HH9 432 aa9.86□□□□□ -0.83
SNX1-211ENST00000560829 DAZ1Q9NQZ3 744 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms