RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-214ENST00000560402 VN1R17PQ8TDU5 208 aa10.14□□□□□ -0.79
SMAD3-214ENST00000560402 TMEM167BQ9NRX6 74 aa10.14□□□□□ -0.79
SMAD3-214ENST00000560402 S4R3C0 116 aa10.14□□□□□ -0.79
SMAD3-214ENST00000560402 ARL2-SNX15V9GYD0 113 aa10.14□□□□□ -0.79
SMAD3-214ENST00000560402 C9JQL5 133 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 F6UZH7 168 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 PDE6DO43924 150 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 CLEC3BP05452 202 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 STAG3L2P0CL84 134 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 STAG3L3P0CL85 134 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 FAM78BQ5VT40 261 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 UNQ9165/PRO28630Q6UXU0 137 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 PQLC2Q6ZP29 291 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 RBPMS2Q6ZRY4 209 aaKnown RBP10.13□□□□□ -0.79
SMAD3-214ENST00000560402 SSX7Q7RTT5 188 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 TMEM190Q8WZ59 177 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 NPIPB3Q92617 1050 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 TRGV9Q99603 122 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 SPAG8Q99932 426 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-214ENST00000560402 FUT9Q9Y231 359 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 PRELID1Q9Y255 219 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 TP53TG1Q9Y2A0 90 aa10.13□□□□□ -0.79
SMAD3-214ENST00000560402 ELOA3CA0A087WX78 387 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-214ENST00000560402 B4DEV8 164 aa10.12□□□□□ -0.79
SMAD3-214ENST00000560402 HMGB3O15347 200 aaKnown RBP10.12□□□□□ -0.79
SMAD3-214ENST00000560402 TGOLN2O43493 480 aa10.12□□□□□ -0.79
SMAD3-214ENST00000560402 CLN5O75503 358 aa10.12□□□□□ -0.79
SMAD3-214ENST00000560402 LINC00869P0C866 280 aa10.12□□□□□ -0.79
SMAD3-214ENST00000560402 APOC4P55056 127 aa10.12□□□□□ -0.79
SMAD3-214ENST00000560402 WFDC3Q8IUB2 231 aa10.12□□□□□ -0.79
SMAD3-214ENST00000560402 CYB561D1Q8N8Q1 229 aa10.12□□□□□ -0.79
SMAD3-214ENST00000560402 TMEM116Q8NCL8 245 aa10.12□□□□□ -0.79
SMAD3-214ENST00000560402 TVP23CQ96ET8 276 aa10.12□□□□□ -0.79
SMAD3-214ENST00000560402 SMCO4Q9NRQ5 59 aa10.12□□□□□ -0.79
SMAD3-214ENST00000560402 PUS1Q9Y606 427 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMAD3-214ENST00000560402 TRAV30A0A087WSZ9 112 aa10.11□□□□□ -0.79
SMAD3-214ENST00000560402 OR5G3P0C626 314 aa10.11□□□□□ -0.79
SMAD3-214ENST00000560402 ARL14EPLP0DKL9 152 aa10.11□□□□□ -0.79
SMAD3-214ENST00000560402 S100A7P31151 101 aa10.11□□□□□ -0.79
SMAD3-214ENST00000560402 TM4SF20Q53R12 229 aa10.11□□□□□ -0.79
SMAD3-214ENST00000560402 C10orf113Q5VZT2 155 aa10.11□□□□□ -0.79
SMAD3-214ENST00000560402 STXBP6Q8NFX7 210 aa10.11□□□□□ -0.79
SMAD3-214ENST00000560402 UHRF2Q96PU4 802 aa10.11□□□□□ -0.79
SMAD3-214ENST00000560402 OVOL2Q9BRP0 275 aa10.11□□□□□ -0.79
SMAD3-214ENST00000560402 DNAJC4Q9NNZ3 241 aa10.11□□□□□ -0.79
SMAD3-214ENST00000560402 RPS10P5Q9NQ39 176 aa10.11□□□□□ -0.79
SMAD3-214ENST00000560402 DAZ1Q9NQZ3 744 aaKnown RBP10.11□□□□□ -0.79
SMAD3-214ENST00000560402 ZNF727A8MUV8 499 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 C11orf94C9JXX5 98 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 H3BQ15 152 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 UBE2CO00762 179 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 TSPAN4O14817 238 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 PAGE4O60829 102 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 ATF4P18848 351 aaPredicted RBP10.1□□□□□ -0.79
SMAD3-214ENST00000560402 GCHFRP30047 84 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 NPBWR1P48145 328 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 GCSAMLQ5JQS6 135 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 CST9LP1Q5W188 147 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 ATRAIDQ6UW56 229 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 Q6ZWC4 215 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 OR4X1Q8NH49 305 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 FNDC4Q9H6D8 234 aaPredicted RBP10.1□□□□□ -0.79
SMAD3-214ENST00000560402 RNF24Q9Y225 148 aa10.1□□□□□ -0.79
SMAD3-214ENST00000560402 NUPR2A6NF83 97 aa10.09□□□□□ -0.79
SMAD3-214ENST00000560402 NDUFA4O00483 81 aa10.09□□□□□ -0.79
SMAD3-214ENST00000560402 OR7C2O60412 319 aa10.09□□□□□ -0.79
SMAD3-214ENST00000560402 BMI1P35226 326 aa10.09□□□□□ -0.79
SMAD3-214ENST00000560402 LINC00476Q8WZB0 136 aa10.09□□□□□ -0.79
SMAD3-214ENST00000560402 SMIM7Q9BQ49 75 aa10.09□□□□□ -0.79
SMAD3-214ENST00000560402 C21orf62Q9NYP8 219 aa10.09□□□□□ -0.79
SMAD3-214ENST00000560402 NAT8Q9UHE5 227 aa10.09□□□□□ -0.79
SMAD3-214ENST00000560402 TMA7Q9Y2S6 64 aaKnown RBP10.09□□□□□ -0.79
SMAD3-214ENST00000560402 SELENOKQ9Y6D0 94 aa10.09□□□□□ -0.79
SMAD3-214ENST00000560402 IGKV1OR2-108A0A075B7D4 117 aa10.08□□□□□ -0.8
SMAD3-214ENST00000560402 KIR2DL5BA0A0G2JN68 375 aa10.08□□□□□ -0.8
SMAD3-214ENST00000560402 KIR2DL5BA0A0G2JPC4 375 aa10.08□□□□□ -0.8
SMAD3-214ENST00000560402 C7orf77A4D0Y5 90 aa10.08□□□□□ -0.8
SMAD3-214ENST00000560402 OR4C46A6NHA9 309 aa10.08□□□□□ -0.8
SMAD3-214ENST00000560402 DNASE2O00115 360 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-214ENST00000560402 HYPMO75409 117 aa10.08□□□□□ -0.8
SMAD3-214ENST00000560402 MFAP4P55083 255 aa10.08□□□□□ -0.8
SMAD3-214ENST00000560402 MLANAQ16655 118 aa10.08□□□□□ -0.8
SMAD3-214ENST00000560402 KIR2DL5AQ8N109 375 aa10.08□□□□□ -0.8
SMAD3-214ENST00000560402 KIR2DL5BQ8NHK3 375 aa10.08□□□□□ -0.8
SMAD3-214ENST00000560402 TMPRSS5Q9H3S3 457 aa10.08□□□□□ -0.8
SMAD3-214ENST00000560402 A0A087WWC5 75 aa10.07□□□□□ -0.8
SMAD3-214ENST00000560402 IGHV3-35A0A0C4DH35 117 aa10.07□□□□□ -0.8
SMAD3-214ENST00000560402 OR2T8A6NH00 312 aa10.07□□□□□ -0.8
SMAD3-214ENST00000560402 I3L2K1 104 aa10.07□□□□□ -0.8
SMAD3-214ENST00000560402 K7EMT4 169 aa10.07□□□□□ -0.8
SMAD3-214ENST00000560402 MFAP2P55001 183 aa10.07□□□□□ -0.8
SMAD3-214ENST00000560402 UBE2G2P60604 165 aa10.07□□□□□ -0.8
SMAD3-214ENST00000560402 TMEM241Q24JQ0 296 aa10.07□□□□□ -0.8
SMAD3-214ENST00000560402 FAM90A2PQ658T7 463 aa10.07□□□□□ -0.8
SMAD3-214ENST00000560402 MIR17HGQ75NE6 70 aa10.07□□□□□ -0.8
SMAD3-214ENST00000560402 SEPSECSQ9HD40 501 aaKnown RBP10.07□□□□□ -0.8
SMAD3-214ENST00000560402 CXorf65A6NEN9 183 aa10.06□□□□□ -0.8
SMAD3-214ENST00000560402 FAM74A7A6NL05 159 aa10.06□□□□□ -0.8
SMAD3-214ENST00000560402 SPRY2O43597 315 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms