RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 TMED6Q8WW62 240 aa9.15□□□□□ -0.94
USP8-209ENST00000560297 PHYHIPLQ96FC7 376 aa9.15□□□□□ -0.94
USP8-209ENST00000560297 C17orf77Q96MU5 243 aa9.15□□□□□ -0.94
USP8-209ENST00000560297 CLEC5AQ9NY25 188 aa9.15□□□□□ -0.94
USP8-209ENST00000560297 CMYA5Q8N3K9 4069 aa9.14□□□□□ -0.95
USP8-209ENST00000560297 CTXND1A0A1B0GTU2 59 aa9.14□□□□□ -0.95
USP8-209ENST00000560297 H3BQ15 152 aa9.14□□□□□ -0.95
USP8-209ENST00000560297 SOCS3O14543 225 aa9.14□□□□□ -0.95
USP8-209ENST00000560297 ZNF253O75346 499 aa9.14□□□□□ -0.95
USP8-209ENST00000560297 STAG3L2P0CL84 134 aa9.14□□□□□ -0.95
USP8-209ENST00000560297 STAG3L3P0CL85 134 aa9.14□□□□□ -0.95
USP8-209ENST00000560297 PDE6HQ13956 83 aa9.14□□□□□ -0.95
USP8-209ENST00000560297 SAT2Q96F10 170 aaPredicted RBP9.14□□□□□ -0.95
USP8-209ENST00000560297 SLC50A1Q9BRV3 221 aa9.14□□□□□ -0.95
USP8-209ENST00000560297 C19orf73Q9NVV2 129 aa9.14□□□□□ -0.95
USP8-209ENST00000560297 ZNF586Q9NXT0 402 aa9.14□□□□□ -0.95
USP8-209ENST00000560297 NOTCH1P46531 2555 aa9.14□□□□□ -0.95
USP8-209ENST00000560297 TRBV19A0A075B6N1 114 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 BOLA2-SMG1P6H3BVE0 249 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 CXorf1O96002 111 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 PRB2P02812 416 aaPredicted RBP9.13□□□□□ -0.95
USP8-209ENST00000560297 ZNF688P0C7X2 276 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 PYYP10082 97 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 DEFB131AP59861 70 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 PSG9Q00887 426 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 DEFA6Q01524 100 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 ODF3L2Q3SX64 289 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 ZNF503Q96F45 646 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 LINC00052Q96N35 136 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 TUBA4BQ9H853 241 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 MAP6D1Q9H9H5 199 aa9.13□□□□□ -0.95
USP8-209ENST00000560297 ZNF331Q9NQX6 463 aaPredicted RBP9.13□□□□□ -0.95
USP8-209ENST00000560297 NBEAL1Q6ZS30 2694 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 A8MZ25 164 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 K7EIL1 84 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 HMGB3O15347 200 aaKnown RBP9.12□□□□□ -0.95
USP8-209ENST00000560297 OR10J4P0C629 311 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 ARL14EPLP0DKL9 152 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 SULT1A2P50226 295 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 UBE2L3P68036 154 aaKnown RBP9.12□□□□□ -0.95
USP8-209ENST00000560297 ZNF726P1Q15940 193 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 PSMG4Q5JS54 123 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 LYPD1Q8N2G4 141 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 FAM24BQ8N5W8 94 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 FAM213BQ8TBF2 198 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 BLNKQ8WV28 456 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 FXYD5Q96DB9 178 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 TMEM167BQ9NRX6 74 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 UBQLN2Q9UHD9 624 aa9.12□□□□□ -0.95
USP8-209ENST00000560297 TRAV8-2A0A0B4J237 113 aa9.11□□□□□ -0.95
USP8-209ENST00000560297 SNRPCP09234 159 aaKnown RBP9.11□□□□□ -0.95
USP8-209ENST00000560297 IGHV4-30-4P0DP06 118 aa9.11□□□□□ -0.95
USP8-209ENST00000560297 PSG3Q16557 428 aa9.11□□□□□ -0.95
USP8-209ENST00000560297 DEFB121Q5J5C9 76 aa9.11□□□□□ -0.95
USP8-209ENST00000560297 DEFB125Q8N687 156 aa9.11□□□□□ -0.95
USP8-209ENST00000560297 MBD3L1Q8WWY6 194 aa9.11□□□□□ -0.95
USP8-209ENST00000560297 AAMDCQ9H7C9 122 aa9.11□□□□□ -0.95
USP8-209ENST00000560297 PRELID1Q9Y255 219 aa9.11□□□□□ -0.95
USP8-209ENST00000560297 MAP1LC3B2A6NCE7 125 aa9.1□□□□□ -0.95
USP8-209ENST00000560297 H3BTX0 84 aa9.1□□□□□ -0.95
USP8-209ENST00000560297 EIF3GO75821 320 aaKnown RBP eCLIP9.1□□□□□ -0.95
USP8-209ENST00000560297 NDUFB4O95168 129 aa9.1□□□□□ -0.95
USP8-209ENST00000560297 H2AFB1P0C5Y9 115 aa9.1□□□□□ -0.95
USP8-209ENST00000560297 GCHFRP30047 84 aa9.1□□□□□ -0.95
USP8-209ENST00000560297 FHITP49789 147 aa9.1□□□□□ -0.95
USP8-209ENST00000560297 APRG1Q8IVJ8 170 aa9.1□□□□□ -0.95
USP8-209ENST00000560297 SUN5Q8TC36 379 aa9.1□□□□□ -0.95
USP8-209ENST00000560297 MRAPQ8TCY5 172 aa9.1□□□□□ -0.95
USP8-209ENST00000560297 SFT2D1Q8WV19 159 aa9.1□□□□□ -0.95
USP8-209ENST00000560297 MRPL53Q96EL3 112 aaKnown RBP9.1□□□□□ -0.95
USP8-209ENST00000560297 MAP1LC3BQ9GZQ8 125 aa9.1□□□□□ -0.95
USP8-209ENST00000560297 SRD5A3Q9H8P0 318 aa9.1□□□□□ -0.95
USP8-209ENST00000560297 TEX46H3BTG2 121 aa9.09□□□□□ -0.95
USP8-209ENST00000560297 SLC17A3O00476 420 aa9.09□□□□□ -0.95
USP8-209ENST00000560297 RANP62826 216 aaKnown RBP9.09□□□□□ -0.95
USP8-209ENST00000560297 FAM74A1Q5RGS3 127 aa9.09□□□□□ -0.95
USP8-209ENST00000560297 IGFL4Q6B9Z1 124 aa9.09□□□□□ -0.95
USP8-209ENST00000560297 EBLN2Q6P2I7 272 aa9.09□□□□□ -0.95
USP8-209ENST00000560297 ALKAL2Q6UX46 152 aa9.09□□□□□ -0.95
USP8-209ENST00000560297 FOXI2Q6ZQN5 318 aa9.09□□□□□ -0.95
USP8-209ENST00000560297 SSX7Q7RTT5 188 aa9.09□□□□□ -0.95
USP8-209ENST00000560297 ZNF738Q8NE65 137 aa9.09□□□□□ -0.95
USP8-209ENST00000560297 C20orf173Q96LM9 149 aa9.09□□□□□ -0.95
USP8-209ENST00000560297 TRAV1-1A0A0B4J248 108 aa9.08□□□□□ -0.96
USP8-209ENST00000560297 HBE1P02100 147 aa9.08□□□□□ -0.96
USP8-209ENST00000560297 BLOC1S1P78537 153 aa9.08□□□□□ -0.96
USP8-209ENST00000560297 STHQ8IWL8 128 aa9.08□□□□□ -0.96
USP8-209ENST00000560297 IQCF2Q8IXL9 164 aa9.08□□□□□ -0.96
USP8-209ENST00000560297 RNF182Q8N6D2 247 aa9.08□□□□□ -0.96
USP8-209ENST00000560297 RPUSD4Q96CM3 377 aaKnown RBP9.08□□□□□ -0.96
USP8-209ENST00000560297 CITED4Q96RK1 184 aa9.08□□□□□ -0.96
USP8-209ENST00000560297 WFDC10AQ9H1F0 79 aa9.08□□□□□ -0.96
USP8-209ENST00000560297 Q9H3A6 140 aa9.08□□□□□ -0.96
USP8-209ENST00000560297 SAV1Q9H4B6 383 aaPredicted RBP9.08□□□□□ -0.96
USP8-209ENST00000560297 LOC102724200A0A096LPH7 203 aaPredicted RBP9.07□□□□□ -0.96
USP8-209ENST00000560297 KNCNA6PVL3 124 aa9.07□□□□□ -0.96
USP8-209ENST00000560297 ZNF705EA8MWA4 302 aaPredicted RBP9.07□□□□□ -0.96
USP8-209ENST00000560297 DUSP14O95147 198 aaKnown RBP9.07□□□□□ -0.96
USP8-209ENST00000560297 CSN1S1P47710 185 aa9.07□□□□□ -0.96
USP8-209ENST00000560297 PPT1P50897 306 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms