RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 SELENOKQ9Y6D0 94 aa10.27□□□□□ -0.77
HMBOX1-213ENST00000560269 TRBV19A0A075B6N1 114 aa10.26□□□□□ -0.77
HMBOX1-213ENST00000560269 TRAV2A0A0B4J234 112 aa10.26□□□□□ -0.77
HMBOX1-213ENST00000560269 A0A1B0GV50 99 aa10.26□□□□□ -0.77
HMBOX1-213ENST00000560269 ZNF253O75346 499 aa10.26□□□□□ -0.77
HMBOX1-213ENST00000560269 RPL11P62913 178 aaKnown RBP10.26□□□□□ -0.77
HMBOX1-213ENST00000560269 PDE6HQ13956 83 aa10.26□□□□□ -0.77
HMBOX1-213ENST00000560269 CLLU1Q5K131 121 aa10.26□□□□□ -0.77
HMBOX1-213ENST00000560269 PRR31Q5SQ13 230 aa10.26□□□□□ -0.77
HMBOX1-213ENST00000560269 RBPMS2Q6ZRY4 209 aaKnown RBP10.26□□□□□ -0.77
HMBOX1-213ENST00000560269 PKD1L1Q8TDX9 2849 aa10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 IZUMO1RA6ND01 250 aa10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 SOCS3O14543 225 aa10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 NDUFB4O95168 129 aa10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 SNRPCP09234 159 aaKnown RBP10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 IGLL1P15814 213 aa10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 PPT1P50897 306 aa10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 LCN12Q6JVE5 192 aa10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 IQCF2Q8IXL9 164 aa10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 DCANP1Q8TF63 244 aa10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 BLNKQ8WV28 456 aa10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 SPAG8Q99932 426 aaPredicted RBP10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 GPR61Q9BZJ8 451 aa10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 MS4A6AQ9H2W1 248 aa10.25□□□□□ -0.77
HMBOX1-213ENST00000560269 CMYA5Q8N3K9 4069 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 IGKV3-7A0A075B6H7 116 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 H3BTX0 84 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 K7EQG2 157 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 SLC17A3O00476 420 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 PAFAH1B2P68402 229 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 SAMD13Q5VXD3 122 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 LYPD1Q8N2G4 141 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 GBGT1Q8N5D6 347 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 SLC50A1Q9BRV3 221 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 MANBALQ9NQG1 85 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 ZNF331Q9NQX6 463 aaPredicted RBP10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 ARL2-SNX15V9GYD0 113 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 DNHD1Q96M86 4753 aa10.24□□□□□ -0.77
HMBOX1-213ENST00000560269 A0A1W2PRE2 83 aa10.23□□□□□ -0.77
HMBOX1-213ENST00000560269 DNASE2O00115 360 aaPredicted RBP10.23□□□□□ -0.77
HMBOX1-213ENST00000560269 PSG9Q00887 426 aa10.23□□□□□ -0.77
HMBOX1-213ENST00000560269 TRAV8-2A0A0B4J237 113 aa10.22□□□□□ -0.77
HMBOX1-213ENST00000560269 OR4C46A6NHA9 309 aa10.22□□□□□ -0.77
HMBOX1-213ENST00000560269 FAM74A7A6NL05 159 aa10.22□□□□□ -0.77
HMBOX1-213ENST00000560269 ISLRO14498 428 aa10.22□□□□□ -0.77
HMBOX1-213ENST00000560269 RANP62826 216 aaKnown RBP10.22□□□□□ -0.77
HMBOX1-213ENST00000560269 C16orf92Q96LL3 132 aa10.22□□□□□ -0.77
HMBOX1-213ENST00000560269 CLEC5AQ9NY25 188 aa10.22□□□□□ -0.77
HMBOX1-213ENST00000560269 GNG13Q9P2W3 67 aa10.22□□□□□ -0.77
HMBOX1-213ENST00000560269 ZNF256Q9Y2P7 627 aaPredicted RBP10.22□□□□□ -0.77
HMBOX1-213ENST00000560269 YTHDF2Q9Y5A9 579 aaKnown RBP10.22□□□□□ -0.77
HMBOX1-213ENST00000560269 PAGE4O60829 102 aa10.21□□□□□ -0.77
HMBOX1-213ENST00000560269 IFNA1P01562 189 aa10.21□□□□□ -0.77
HMBOX1-213ENST00000560269 TAGLN2P37802 199 aaKnown RBP10.21□□□□□ -0.77
HMBOX1-213ENST00000560269 ID1P41134 155 aa10.21□□□□□ -0.77
HMBOX1-213ENST00000560269 TFPI2P48307 235 aa10.21□□□□□ -0.77
HMBOX1-213ENST00000560269 UBE2G2P60604 165 aa10.21□□□□□ -0.77
HMBOX1-213ENST00000560269 GUCA2BQ16661 112 aa10.21□□□□□ -0.77
HMBOX1-213ENST00000560269 BEAN1Q3B7T3 259 aa10.21□□□□□ -0.77
HMBOX1-213ENST00000560269 WFDC3Q8IUB2 231 aa10.21□□□□□ -0.77
HMBOX1-213ENST00000560269 NKX6-2Q9C056 277 aaPredicted RBP10.21□□□□□ -0.77
HMBOX1-213ENST00000560269 Q9H3A6 140 aa10.21□□□□□ -0.77
HMBOX1-213ENST00000560269 OTORQ9NRC9 128 aa10.21□□□□□ -0.77
HMBOX1-213ENST00000560269 GGTLC3B5MD39 225 aa10.2□□□□□ -0.78
HMBOX1-213ENST00000560269 BCL2P10415 239 aa10.2□□□□□ -0.78
HMBOX1-213ENST00000560269 ICAM4Q14773 271 aa10.2□□□□□ -0.78
HMBOX1-213ENST00000560269 EXOC3-AS1Q8N2X6 119 aa10.2□□□□□ -0.78
HMBOX1-213ENST00000560269 FAM24BQ8N5W8 94 aa10.2□□□□□ -0.78
HMBOX1-213ENST00000560269 FAM210AQ96ND0 272 aa10.2□□□□□ -0.78
HMBOX1-213ENST00000560269 AAMDCQ9H7C9 122 aa10.2□□□□□ -0.78
HMBOX1-213ENST00000560269 MED9Q9NWA0 146 aa10.2□□□□□ -0.78
HMBOX1-213ENST00000560269 PRELID1Q9Y255 219 aa10.2□□□□□ -0.78
HMBOX1-213ENST00000560269 LOC102723971A0A1B0GUV8 181 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 PGPA6NDG6 321 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 RBFOX3A6NFN3 312 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 HLA-DMBP28068 263 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 SNRPD3P62318 126 aaKnown RBP10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 SUMO1P63165 101 aaKnown RBP10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 PSG3Q16557 428 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 HAGHQ16775 308 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 OXLD1Q5BKU9 147 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 IGFL4Q6B9Z1 124 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 CCDC28AQ8IWP9 274 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 RNF182Q8N6D2 247 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 ARL6IP6Q8N6S5 226 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 MRPL53Q96EL3 112 aaKnown RBP10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 C20orf173Q96LM9 149 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 TXNDC17Q9BRA2 123 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 VAX2Q9UIW0 290 aa10.19□□□□□ -0.78
HMBOX1-213ENST00000560269 ATP5G3P48201 142 aa10.18□□□□□ -0.78
HMBOX1-213ENST00000560269 EGFEM1PQ0D2K5 195 aa10.18□□□□□ -0.78
HMBOX1-213ENST00000560269 ZNF506Q5JVG8 444 aa10.18□□□□□ -0.78
HMBOX1-213ENST00000560269 SAMD5Q5TGI4 173 aa10.18□□□□□ -0.78
HMBOX1-213ENST00000560269 CST9LP1Q5W188 147 aa10.18□□□□□ -0.78
HMBOX1-213ENST00000560269 RARRES2Q99969 163 aa10.18□□□□□ -0.78
HMBOX1-213ENST00000560269 LINC00862A6NCI5 91 aa10.17□□□□□ -0.78
HMBOX1-213ENST00000560269 C11orf94C9JXX5 98 aa10.17□□□□□ -0.78
HMBOX1-213ENST00000560269 M0R3E3 92 aa10.17□□□□□ -0.78
HMBOX1-213ENST00000560269 NDUFS6O75380 124 aaKnown RBP10.17□□□□□ -0.78
HMBOX1-213ENST00000560269 ZNF688P0C7X2 276 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms