RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 IGHV3-23P01764 117 aa15.47■□□□□ 0.07
PSEN1-225ENST00000560005 IL4P05112 153 aa15.47■□□□□ 0.07
PSEN1-225ENST00000560005 ZP3P21754 424 aa15.47■□□□□ 0.07
PSEN1-225ENST00000560005 CCDC140Q96MF4 163 aa15.47■□□□□ 0.07
PSEN1-225ENST00000560005 SCRT1Q9BWW7 348 aa15.47■□□□□ 0.07
PSEN1-225ENST00000560005 SLC35B3Q9H1N7 401 aa15.47■□□□□ 0.07
PSEN1-225ENST00000560005 TUBA4BQ9H853 241 aa15.47■□□□□ 0.07
PSEN1-225ENST00000560005 DNAH10Q8IVF4 4471 aa15.47■□□□□ 0.07
PSEN1-225ENST00000560005 OR7C2O60412 319 aa15.46■□□□□ 0.07
PSEN1-225ENST00000560005 ZNF343Q6P1L6 599 aa15.46■□□□□ 0.07
PSEN1-225ENST00000560005 ADMP35318 185 aa15.45■□□□□ 0.06
PSEN1-225ENST00000560005 ARL3P36405 182 aa15.45■□□□□ 0.06
PSEN1-225ENST00000560005 SPATA31B1PQ5VZV4 182 aa15.45■□□□□ 0.06
PSEN1-225ENST00000560005 TMEM190Q8WZ59 177 aa15.45■□□□□ 0.06
PSEN1-225ENST00000560005 LINC00476Q8WZB0 136 aa15.45■□□□□ 0.06
PSEN1-225ENST00000560005 CHRDL1Q9BU40 450 aa15.45■□□□□ 0.06
PSEN1-225ENST00000560005 PAXXQ9BUH6 204 aa15.45■□□□□ 0.06
PSEN1-225ENST00000560005 SLC25A39Q9BZJ4 359 aaPredicted RBP15.45■□□□□ 0.06
PSEN1-225ENST00000560005 NKX6-2Q9C056 277 aaPredicted RBP15.45■□□□□ 0.06
PSEN1-225ENST00000560005 OR51M1Q9H341 326 aa15.45■□□□□ 0.06
PSEN1-225ENST00000560005 PUS1Q9Y606 427 aaKnown RBP eCLIP15.45■□□□□ 0.06
PSEN1-225ENST00000560005 KMT2AQ03164 3969 aa15.44■□□□□ 0.06
PSEN1-225ENST00000560005 DEFA5Q01523 94 aa15.44■□□□□ 0.06
PSEN1-225ENST00000560005 MEF2BQ02080 365 aaPredicted RBP15.44■□□□□ 0.06
PSEN1-225ENST00000560005 ICAM4Q14773 271 aa15.44■□□□□ 0.06
PSEN1-225ENST00000560005 FAM167A-AS1Q96KT0 104 aa15.44■□□□□ 0.06
PSEN1-225ENST00000560005 RARRES2Q99969 163 aa15.44■□□□□ 0.06
PSEN1-225ENST00000560005 SHANK2-AS3Q9BTD1 123 aa15.44■□□□□ 0.06
PSEN1-225ENST00000560005 SEC11CQ9BY50 192 aa15.44■□□□□ 0.06
PSEN1-225ENST00000560005 TMPRSS5Q9H3S3 457 aa15.44■□□□□ 0.06
PSEN1-225ENST00000560005 TMEM14CQ9P0S9 112 aa15.44■□□□□ 0.06
PSEN1-225ENST00000560005 RABAC1Q9UI14 185 aa15.44■□□□□ 0.06
PSEN1-225ENST00000560005 RYR1P21817 5038 aa15.44■□□□□ 0.06
PSEN1-225ENST00000560005 SRSF3P84103 164 aaKnown RBP15.43■□□□□ 0.06
PSEN1-225ENST00000560005 RXFP4Q8TDU9 374 aa15.43■□□□□ 0.06
PSEN1-225ENST00000560005 SLC25A2Q9BXI2 301 aa15.43■□□□□ 0.06
PSEN1-225ENST00000560005 TMEM231Q9H6L2 316 aa15.43■□□□□ 0.06
PSEN1-225ENST00000560005 F8W036 122 aa15.42■□□□□ 0.06
PSEN1-225ENST00000560005 TMEM250H0YL14 139 aa15.42■□□□□ 0.06
PSEN1-225ENST00000560005 PAGE4O60829 102 aa15.42■□□□□ 0.06
PSEN1-225ENST00000560005 GGCTO75223 188 aaKnown RBP15.42■□□□□ 0.06
PSEN1-225ENST00000560005 SFTA3P0C7M3 94 aa15.42■□□□□ 0.06
PSEN1-225ENST00000560005 GTSCR1Q86UQ5 136 aa15.42■□□□□ 0.06
PSEN1-225ENST00000560005 UHRF2Q96PU4 802 aa15.42■□□□□ 0.06
PSEN1-225ENST00000560005 PEF1Q9UBV8 284 aaKnown RBP15.42■□□□□ 0.06
PSEN1-225ENST00000560005 A0A1W2PRE2 83 aa15.41■□□□□ 0.06
PSEN1-225ENST00000560005 F6UZH7 168 aa15.41■□□□□ 0.06
PSEN1-225ENST00000560005 H3BRN7 92 aa15.41■□□□□ 0.06
PSEN1-225ENST00000560005 NDUFA4O00483 81 aa15.41■□□□□ 0.06
PSEN1-225ENST00000560005 PDE6DO43924 150 aa15.41■□□□□ 0.06
PSEN1-225ENST00000560005 LY6G6CO95867 125 aa15.41■□□□□ 0.06
PSEN1-225ENST00000560005 SRP19P09132 144 aaKnown RBP15.41■□□□□ 0.06
PSEN1-225ENST00000560005 UBE2L3P68036 154 aaKnown RBP15.41■□□□□ 0.06
PSEN1-225ENST00000560005 SOHLH1Q5JUK2 328 aa15.41■□□□□ 0.06
PSEN1-225ENST00000560005 TOMM20LQ6UXN7 152 aa15.41■□□□□ 0.06
PSEN1-225ENST00000560005 BPIFA4PQ86YQ2 179 aa15.41■□□□□ 0.06
PSEN1-225ENST00000560005 C11orf94C9JXX5 98 aa15.4■□□□□ 0.06
PSEN1-225ENST00000560005 EIF3GO75821 320 aaKnown RBP eCLIP15.4■□□□□ 0.06
PSEN1-225ENST00000560005 C10orf91Q5T1B1 145 aa15.4■□□□□ 0.06
PSEN1-225ENST00000560005 CST9LP1Q5W188 147 aa15.4■□□□□ 0.06
PSEN1-225ENST00000560005 LINC00052Q96N35 136 aa15.4■□□□□ 0.06
PSEN1-225ENST00000560005 GPR82Q96P67 336 aa15.4■□□□□ 0.06
PSEN1-225ENST00000560005 METTL26Q96S19 204 aa15.4■□□□□ 0.06
PSEN1-225ENST00000560005 TRAV5A0A0B4J249 113 aa15.39■□□□□ 0.05
PSEN1-225ENST00000560005 ZNF98A6NK75 572 aa15.39■□□□□ 0.05
PSEN1-225ENST00000560005 USF2Q15853 346 aaPredicted RBP15.39■□□□□ 0.05
PSEN1-225ENST00000560005 FAM106AQ4KMX7 169 aa15.39■□□□□ 0.05
PSEN1-225ENST00000560005 CARHSP1Q9Y2V2 147 aaKnown RBP15.39■□□□□ 0.05
PSEN1-225ENST00000560005 HIST1H1EP10412 219 aaKnown RBP15.38■□□□□ 0.05
PSEN1-225ENST00000560005 RPL7P18124 248 aaKnown RBP15.38■□□□□ 0.05
PSEN1-225ENST00000560005 NPPCP23582 126 aa15.38■□□□□ 0.05
PSEN1-225ENST00000560005 FAM74A3Q4VXF1 159 aa15.38■□□□□ 0.05
PSEN1-225ENST00000560005 C1orf194Q5T5A4 169 aa15.38■□□□□ 0.05
PSEN1-225ENST00000560005 LINC00322Q6ZN03 302 aaPredicted RBP15.38■□□□□ 0.05
PSEN1-225ENST00000560005 OR9G4Q8NGQ1 327 aa15.38■□□□□ 0.05
PSEN1-225ENST00000560005 ZNF503Q96F45 646 aa15.38■□□□□ 0.05
PSEN1-225ENST00000560005 TCEAL7Q9BRU2 100 aa15.38■□□□□ 0.05
PSEN1-225ENST00000560005 ZFAND3Q9H8U3 227 aa15.38■□□□□ 0.05
PSEN1-225ENST00000560005 KIAA1109Q2LD37 5005 aa15.37■□□□□ 0.05
PSEN1-225ENST00000560005 FAM74A7A6NL05 159 aa15.37■□□□□ 0.05
PSEN1-225ENST00000560005 PPP5D1E7EU14 171 aa15.37■□□□□ 0.05
PSEN1-225ENST00000560005 NBEAP1P0C6P0 100 aa15.37■□□□□ 0.05
PSEN1-225ENST00000560005 MORN5Q5VZ52 161 aa15.37■□□□□ 0.05
PSEN1-225ENST00000560005 SVBPQ8N300 66 aa15.37■□□□□ 0.05
PSEN1-225ENST00000560005 HECTD4Q9Y4D8 3996 aa15.36■□□□□ 0.05
PSEN1-225ENST00000560005 C9JQL5 133 aa15.36■□□□□ 0.05
PSEN1-225ENST00000560005 APOC3P02656 99 aa15.36■□□□□ 0.05
PSEN1-225ENST00000560005 OR10J4P0C629 311 aa15.36■□□□□ 0.05
PSEN1-225ENST00000560005 CD81P60033 236 aa15.36■□□□□ 0.05
PSEN1-225ENST00000560005 UBE2G2P60604 165 aa15.36■□□□□ 0.05
PSEN1-225ENST00000560005 KLF5Q13887 457 aaPredicted RBP15.36■□□□□ 0.05
PSEN1-225ENST00000560005 LCN12Q6JVE5 192 aa15.36■□□□□ 0.05
PSEN1-225ENST00000560005 GPHB5Q86YW7 130 aa15.36■□□□□ 0.05
PSEN1-225ENST00000560005 FXYD5Q96DB9 178 aa15.36■□□□□ 0.05
PSEN1-225ENST00000560005 A0A1W2PS18 150 aa15.35■□□□□ 0.05
PSEN1-225ENST00000560005 IZUMO1RA6ND01 250 aa15.35■□□□□ 0.05
PSEN1-225ENST00000560005 SYNJ2BPP57105 145 aa15.35■□□□□ 0.05
PSEN1-225ENST00000560005 OR8I2Q8N0Y5 310 aa15.35■□□□□ 0.05
PSEN1-225ENST00000560005 RPUSD4Q96CM3 377 aaKnown RBP15.35■□□□□ 0.05
PSEN1-225ENST00000560005 K7EMT4 169 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms