RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 OR8A1Q8NGG7 326 aa8.96□□□□□ -0.98
SNX1-209ENST00000559961 MITD1Q8WV92 249 aa8.96□□□□□ -0.98
SNX1-209ENST00000559961 RPUSD4Q96CM3 377 aaKnown RBP8.96□□□□□ -0.98
SNX1-209ENST00000559961 UHRF2Q96PU4 802 aa8.96□□□□□ -0.98
SNX1-209ENST00000559961 SLC50A1Q9BRV3 221 aa8.96□□□□□ -0.98
SNX1-209ENST00000559961 PLA2G2EQ9NZK7 142 aa8.96□□□□□ -0.98
SNX1-209ENST00000559961 NDUFA13Q9P0J0 144 aa8.96□□□□□ -0.98
SNX1-209ENST00000559961 TRAV8-2A0A0B4J237 113 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 PRSS29PA6NIE9 313 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 A8MTW9 85 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 AGPAT2O15120 278 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 CXCL3P19876 107 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 CAV2P51636 162 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 FAM3BP58499 235 aaPredicted RBP8.95□□□□□ -0.98
SNX1-209ENST00000559961 TAS2R60P59551 318 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 SLC38A11Q08AI6 406 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 C10orf113Q5VZT2 155 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 TMEM88Q6PEY1 159 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 AMTNQ6UX39 209 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 C12orf45Q8N5I9 185 aaPredicted RBP8.95□□□□□ -0.98
SNX1-209ENST00000559961 OR1L4Q8NGR5 311 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 C16orf74Q96GX8 76 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 C20orf85Q9H1P6 137 aa8.95□□□□□ -0.98
SNX1-209ENST00000559961 LSM5Q9Y4Y9 91 aaKnown RBP8.95□□□□□ -0.98
SNX1-209ENST00000559961 IGLV2-18A0A075B6J9 118 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 TRAV12-2A0A075B6T6 113 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 PMS2P5A8MQ11 134 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 F5H768 121 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 K7EPK0 472 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 ATP5G1P05496 136 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 IL7P13232 177 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 CDKN1BP46527 198 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 ATP5G3P48201 142 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 ZNF493Q6ZR52 646 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 BAP18Q8IXM2 172 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 RBM38Q9H0Z9 239 aaKnown RBP8.94□□□□□ -0.98
SNX1-209ENST00000559961 DNAJC4Q9NNZ3 241 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 RCL1Q9Y2P8 373 aaKnown RBP8.94□□□□□ -0.98
SNX1-209ENST00000559961 TIMM8BQ9Y5J9 83 aaPredicted RBP8.94□□□□□ -0.98
SNX1-209ENST00000559961 PXMP4Q9Y6I8 212 aa8.94□□□□□ -0.98
SNX1-209ENST00000559961 C7orf66A4D0T2 115 aa8.93□□□□□ -0.98
SNX1-209ENST00000559961 H7BYZ3 331 aa8.93□□□□□ -0.98
SNX1-209ENST00000559961 LYRM1O43325 122 aa8.93□□□□□ -0.98
SNX1-209ENST00000559961 NUDT3O95989 172 aa8.93□□□□□ -0.98
SNX1-209ENST00000559961 MBPP02686 304 aaPredicted RBP8.93□□□□□ -0.98
SNX1-209ENST00000559961 CAMLGP49069 296 aa8.93□□□□□ -0.98
SNX1-209ENST00000559961 CCL18P55774 89 aa8.93□□□□□ -0.98
SNX1-209ENST00000559961 HBG1P69891 147 aa8.93□□□□□ -0.98
SNX1-209ENST00000559961 HBG2P69892 147 aa8.93□□□□□ -0.98
SNX1-209ENST00000559961 GUK1Q16774 197 aa8.93□□□□□ -0.98
SNX1-209ENST00000559961 STX12Q86Y82 276 aa8.93□□□□□ -0.98
SNX1-209ENST00000559961 PFDN5Q99471 154 aa8.93□□□□□ -0.98
SNX1-209ENST00000559961 KMT2AQ03164 3969 aa8.93□□□□□ -0.98
SNX1-209ENST00000559961 TRAV6A0A075B6T7 132 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 CBY3A6NI87 242 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 CCNKO75909 580 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 TCRBP04435 133 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 S100A11P31949 105 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 S100A10P60903 97 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 CLINT1Q14677 625 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 C1orf134Q5TEV5 83 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 MZT2BQ6NZ67 158 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 ZNF431Q8TF32 576 aaPredicted RBP8.92□□□□□ -0.98
SNX1-209ENST00000559961 C20orf144Q9BQM9 153 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 KRTAP3-3Q9BYR6 98 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 UQCC1Q9NVA1 299 aa8.92□□□□□ -0.98
SNX1-209ENST00000559961 FAM240BA0A1B0GVZ2 78 aa8.91□□□□□ -0.98
SNX1-209ENST00000559961 SNURFLB1AK76 121 aa8.91□□□□□ -0.98
SNX1-209ENST00000559961 CRXO43186 299 aaPredicted RBP8.91□□□□□ -0.98
SNX1-209ENST00000559961 LEPP41159 167 aa8.91□□□□□ -0.98
SNX1-209ENST00000559961 BAXQ07812 192 aa8.91□□□□□ -0.98
SNX1-209ENST00000559961 PATE2Q6UY27 113 aa8.91□□□□□ -0.98
SNX1-209ENST00000559961 NRARPQ7Z6K4 114 aa8.91□□□□□ -0.98
SNX1-209ENST00000559961 C2orf50Q96LR7 162 aa8.91□□□□□ -0.98
SNX1-209ENST00000559961 C17orf77Q96MU5 243 aa8.91□□□□□ -0.98
SNX1-209ENST00000559961 ZNF331Q9NQX6 463 aaPredicted RBP8.91□□□□□ -0.98
SNX1-209ENST00000559961 CCSO14618 274 aa8.9□□□□□ -0.98
SNX1-209ENST00000559961 CST7O76096 145 aa8.9□□□□□ -0.98
SNX1-209ENST00000559961 RLN2P04090 185 aa8.9□□□□□ -0.98
SNX1-209ENST00000559961 H2AFB2P0C5Z0 115 aa8.9□□□□□ -0.98
SNX1-209ENST00000559961 BTCP35070 178 aa8.9□□□□□ -0.98
SNX1-209ENST00000559961 ATP6V1FQ16864 119 aa8.9□□□□□ -0.98
SNX1-209ENST00000559961 TMEM263Q8WUH6 116 aaKnown RBP8.9□□□□□ -0.98
SNX1-209ENST00000559961 NUDT15Q9NV35 164 aa8.9□□□□□ -0.98
SNX1-209ENST00000559961 SNRPCP09234 159 aaKnown RBP8.89□□□□□ -0.99
SNX1-209ENST00000559961 AZU1P20160 251 aa8.89□□□□□ -0.99
SNX1-209ENST00000559961 SULT1A1P50225 295 aa8.89□□□□□ -0.99
SNX1-209ENST00000559961 OR5I1Q13606 314 aa8.89□□□□□ -0.99
SNX1-209ENST00000559961 SDHCQ99643 169 aaPredicted RBP8.89□□□□□ -0.99
SNX1-209ENST00000559961 MGST2Q99735 147 aa8.89□□□□□ -0.99
SNX1-209ENST00000559961 CCDC32Q9BV29 185 aa8.89□□□□□ -0.99
SNX1-209ENST00000559961 GPN1Q9HCN4 374 aaPredicted RBP8.89□□□□□ -0.99
SNX1-209ENST00000559961 NOP10Q9NPE3 64 aaKnown RBP8.89□□□□□ -0.99
SNX1-209ENST00000559961 TIMM9Q9Y5J7 89 aa8.89□□□□□ -0.99
SNX1-209ENST00000559961 FAM24AA6NFZ4 105 aa8.88□□□□□ -0.99
SNX1-209ENST00000559961 PRM2P04554 102 aa8.88□□□□□ -0.99
SNX1-209ENST00000559961 MED14OSP0DP75 135 aa8.88□□□□□ -0.99
SNX1-209ENST00000559961 ARL16Q0P5N6 197 aa8.88□□□□□ -0.99
SNX1-209ENST00000559961 OPCMLQ14982 345 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms