RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 TMEM219Q86XT9 240 aa13.83□□□□□ -0.19
SNX1-208ENST00000559844 CMTM2Q8TAZ6 248 aa13.83□□□□□ -0.19
SNX1-208ENST00000559844 CHRDL1Q9BU40 450 aa13.83□□□□□ -0.19
SNX1-208ENST00000559844 RNASE7Q9H1E1 156 aaKnown RBP13.83□□□□□ -0.19
SNX1-208ENST00000559844 IGLC2P0DOY2 106 aa13.83□□□□□ -0.2
SNX1-208ENST00000559844 OR5R1Q8NH85 324 aa13.83□□□□□ -0.2
SNX1-208ENST00000559844 GPR82Q96P67 336 aa13.83□□□□□ -0.2
SNX1-208ENST00000559844 PITPNC1Q9UKF7 332 aa13.83□□□□□ -0.2
SNX1-208ENST00000559844 H3BTX0 84 aa13.82□□□□□ -0.2
SNX1-208ENST00000559844 RPL15P61313 204 aaKnown RBP13.82□□□□□ -0.2
SNX1-208ENST00000559844 EEF1AKMT3Q96AZ1 226 aa13.82□□□□□ -0.2
SNX1-208ENST00000559844 RPH3ALQ9UNE2 315 aa13.82□□□□□ -0.2
SNX1-208ENST00000559844 TRAPPC1Q9Y5R8 145 aa13.82□□□□□ -0.2
SNX1-208ENST00000559844 DNAJC9-AS1A6NH13 148 aa13.82□□□□□ -0.2
SNX1-208ENST00000559844 SH2D7A6NKC9 451 aaPredicted RBP13.82□□□□□ -0.2
SNX1-208ENST00000559844 G3V318 75 aa13.82□□□□□ -0.2
SNX1-208ENST00000559844 M0QZK8 103 aa13.82□□□□□ -0.2
SNX1-208ENST00000559844 MRPS12O15235 138 aaKnown RBP13.82□□□□□ -0.2
SNX1-208ENST00000559844 RABAC1Q9UI14 185 aa13.82□□□□□ -0.2
SNX1-208ENST00000559844 TRAV41A0A0B4J266 112 aa13.81□□□□□ -0.2
SNX1-208ENST00000559844 A6NDX4 124 aa13.81□□□□□ -0.2
SNX1-208ENST00000559844 BMPR1BO00238 502 aa13.81□□□□□ -0.2
SNX1-208ENST00000559844 AMY1AP04745 511 aa13.81□□□□□ -0.2
SNX1-208ENST00000559844 MEOX2P50222 304 aa13.81□□□□□ -0.2
SNX1-208ENST00000559844 HILS1P60008 231 aa13.81□□□□□ -0.2
SNX1-208ENST00000559844 PDE6HQ13956 83 aa13.81□□□□□ -0.2
SNX1-208ENST00000559844 ATP6V0BQ99437 205 aa13.81□□□□□ -0.2
SNX1-208ENST00000559844 ESM1Q9NQ30 184 aa13.81□□□□□ -0.2
SNX1-208ENST00000559844 SERTAD4Q9NUC0 356 aa13.81□□□□□ -0.2
SNX1-208ENST00000559844 VPREB3Q9UKI3 123 aa13.81□□□□□ -0.2
SNX1-208ENST00000559844 TRBV7-1A0A0A6YYK4 115 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 LINC01548A6NM66 108 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 ZNF705GA8MUZ8 300 aaPredicted RBP13.8□□□□□ -0.2
SNX1-208ENST00000559844 NHLRC2Q8NBF2 726 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 TRBV6-1A0A0K0K1D8 114 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 GATCO43716 136 aaKnown RBP13.8□□□□□ -0.2
SNX1-208ENST00000559844 LTAP01374 205 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 SMIM6P0DI80 62 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 RPL7P18124 248 aaKnown RBP13.8□□□□□ -0.2
SNX1-208ENST00000559844 GPR183P32249 361 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 ADMP35318 185 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 COX19Q49B96 90 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 C19orf54Q5BKX5 351 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 OR8I2Q8N0Y5 310 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 TMEM86BQ8N661 226 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 ZNF414Q96IQ9 312 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 C12orf57Q99622 126 aa13.8□□□□□ -0.2
SNX1-208ENST00000559844 JMJD1CQ15652 2540 aa13.79□□□□□ -0.2
SNX1-208ENST00000559844 FAM223BA6NKX1 122 aa13.79□□□□□ -0.2
SNX1-208ENST00000559844 FAM223AQ8IWN6 122 aa13.79□□□□□ -0.2
SNX1-208ENST00000559844 SMIM27A0A1W2PRY6 76 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 K7EQM0 130 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 TCF21O43680 179 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 S100A2P29034 98 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 RAB9AP51151 201 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 ATP5G2Q06055 141 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 SIGLEC15Q6ZMC9 328 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 EXOC3-AS1Q8N2X6 119 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 GRAMD2BQ96HH9 432 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 JMJD8Q96S16 334 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 SETD2Q9BYW2 2564 aaPredicted RBP13.78□□□□□ -0.2
SNX1-208ENST00000559844 IGF1P05019 195 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 CLEC3BP05452 202 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 PSG9Q00887 426 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 COA6Q5JTJ3 125 aaKnown RBP13.78□□□□□ -0.2
SNX1-208ENST00000559844 C9orf152Q5JTZ5 239 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 HIST3H2BBQ8N257 126 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 MLST8Q9BVC4 326 aa13.78□□□□□ -0.2
SNX1-208ENST00000559844 TMEM183AQ8IXX5 376 aa13.77□□□□□ -0.21
SNX1-208ENST00000559844 NUDT10Q8NFP7 164 aa13.77□□□□□ -0.21
SNX1-208ENST00000559844 NUDT11Q96G61 164 aa13.77□□□□□ -0.21
SNX1-208ENST00000559844 CCDC140Q96MF4 163 aa13.77□□□□□ -0.21
SNX1-208ENST00000559844 MS4A10Q96PG2 267 aa13.77□□□□□ -0.21
SNX1-208ENST00000559844 AAMDCQ9H7C9 122 aa13.77□□□□□ -0.21
SNX1-208ENST00000559844 ZNF492Q9P255 531 aa13.77□□□□□ -0.21
SNX1-208ENST00000559844 XKRY2A2RUG3 117 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 BRI3O95415 125 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 WDR73Q6P4I2 378 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 CLEC19AQ6UXS0 136 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 Q86TA4 180 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 TMEM75Q8N9X5 138 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 C17orf77Q96MU5 243 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 NF1P21359 2839 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 H3BUA1 57 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 IGHG2P01859 326 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 RELQ04864 619 aaPredicted RBP13.76□□□□□ -0.21
SNX1-208ENST00000559844 PRR27Q6MZM9 219 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 TOMM20LQ6UXN7 152 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 GOLT1AQ6ZVE7 132 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 GNB4Q9HAV0 340 aa13.76□□□□□ -0.21
SNX1-208ENST00000559844 SERTM2A0A1B0GWG4 89 aa13.75□□□□□ -0.21
SNX1-208ENST00000559844 IZUMO1RA6ND01 250 aa13.75□□□□□ -0.21
SNX1-208ENST00000559844 MT-ND6P03923 174 aa13.75□□□□□ -0.21
SNX1-208ENST00000559844 LURAP1LQ8IV03 231 aa13.75□□□□□ -0.21
SNX1-208ENST00000559844 ARL6IP6Q8N6S5 226 aa13.75□□□□□ -0.21
SNX1-208ENST00000559844 SGK494Q96LW2 274 aa13.75□□□□□ -0.21
SNX1-208ENST00000559844 GNB1LQ9BYB4 327 aa13.75□□□□□ -0.21
SNX1-208ENST00000559844 ZFAND3Q9H8U3 227 aa13.75□□□□□ -0.21
SNX1-208ENST00000559844 IFITM10A6NMD0 228 aa13.74□□□□□ -0.21
SNX1-208ENST00000559844 ZNF253O75346 499 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms