RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 C11orf1Q9H5F2 150 aa13.16□□□□□ -0.3
CDC42BPB-206ENST00000559790 SLC17A3O00476 420 aa13.15□□□□□ -0.3
CDC42BPB-206ENST00000559790 OR5G3P0C626 314 aa13.15□□□□□ -0.3
CDC42BPB-206ENST00000559790 SELENOTP62341 195 aa13.15□□□□□ -0.3
CDC42BPB-206ENST00000559790 ZNRF2Q8NHG8 242 aa13.15□□□□□ -0.3
CDC42BPB-206ENST00000559790 ARL6Q9H0F7 186 aa13.15□□□□□ -0.3
CDC42BPB-206ENST00000559790 NAP1L6A6NFF2 107 aa13.14□□□□□ -0.31
CDC42BPB-206ENST00000559790 ZNF701M0R085 212 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPB-206ENST00000559790 TSC22D2O75157 780 aa13.14□□□□□ -0.31
CDC42BPB-206ENST00000559790 RAP2BP61225 183 aa13.14□□□□□ -0.31
CDC42BPB-206ENST00000559790 SPANXN2Q5MJ10 180 aa13.14□□□□□ -0.31
CDC42BPB-206ENST00000559790 C15orf53Q8NAA6 179 aa13.14□□□□□ -0.31
CDC42BPB-206ENST00000559790 RNASE8Q8TDE3 154 aaKnown RBP13.14□□□□□ -0.31
CDC42BPB-206ENST00000559790 MGST2Q99735 147 aa13.14□□□□□ -0.31
CDC42BPB-206ENST00000559790 PARD6GQ9BYG4 376 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPB-206ENST00000559790 ARV1Q9H2C2 271 aa13.14□□□□□ -0.31
CDC42BPB-206ENST00000559790 ZNF331Q9NQX6 463 aaPredicted RBP13.14□□□□□ -0.31
CDC42BPB-206ENST00000559790 C7orf66A4D0T2 115 aa13.13□□□□□ -0.31
CDC42BPB-206ENST00000559790 CCDC160A6NGH7 325 aa13.13□□□□□ -0.31
CDC42BPB-206ENST00000559790 PRAC2D3DTV9 90 aa13.13□□□□□ -0.31
CDC42BPB-206ENST00000559790 MBPP02686 304 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPB-206ENST00000559790 SNRPCP09234 159 aaKnown RBP13.13□□□□□ -0.31
CDC42BPB-206ENST00000559790 DEFB130BP0DP73 79 aa13.13□□□□□ -0.31
CDC42BPB-206ENST00000559790 DEFB130AP0DP74 79 aa13.13□□□□□ -0.31
CDC42BPB-206ENST00000559790 TAS2R30P59541 319 aa13.13□□□□□ -0.31
CDC42BPB-206ENST00000559790 IAH1Q2TAA2 248 aaPredicted RBP13.13□□□□□ -0.31
CDC42BPB-206ENST00000559790 MITD1Q8WV92 249 aa13.13□□□□□ -0.31
CDC42BPB-206ENST00000559790 TMEM37Q8WXS4 190 aa13.13□□□□□ -0.31
CDC42BPB-206ENST00000559790 APOBP04114 4563 aaKnown RBP13.13□□□□□ -0.31
CDC42BPB-206ENST00000559790 LINC00854A0A1B0GVQ3 168 aa13.12□□□□□ -0.31
CDC42BPB-206ENST00000559790 AGPAT2O15120 278 aa13.12□□□□□ -0.31
CDC42BPB-206ENST00000559790 IL7P13232 177 aa13.12□□□□□ -0.31
CDC42BPB-206ENST00000559790 TEPPQ6URK8 271 aa13.12□□□□□ -0.31
CDC42BPB-206ENST00000559790 LINC00612Q8N6U2 182 aa13.12□□□□□ -0.31
CDC42BPB-206ENST00000559790 RPUSD4Q96CM3 377 aaKnown RBP13.12□□□□□ -0.31
CDC42BPB-206ENST00000559790 NPVFQ9HCQ7 196 aa13.12□□□□□ -0.31
CDC42BPB-206ENST00000559790 CCSO14618 274 aa13.11□□□□□ -0.31
CDC42BPB-206ENST00000559790 PLA2G10O15496 165 aa13.11□□□□□ -0.31
CDC42BPB-206ENST00000559790 SCGB1D2O95969 90 aa13.11□□□□□ -0.31
CDC42BPB-206ENST00000559790 IGLC2P0DOY2 106 aa13.11□□□□□ -0.31
CDC42BPB-206ENST00000559790 B2MP61769 119 aa13.11□□□□□ -0.31
CDC42BPB-206ENST00000559790 TNP2Q05952 138 aa13.11□□□□□ -0.31
CDC42BPB-206ENST00000559790 TRIQKQ629K1 86 aa13.11□□□□□ -0.31
CDC42BPB-206ENST00000559790 RNF141Q8WVD5 230 aa13.11□□□□□ -0.31
CDC42BPB-206ENST00000559790 H3BQ15 152 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 H3BTX0 84 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 CXCL2P19875 107 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 FAM3BP58499 235 aaPredicted RBP13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 TAS2R60P59551 318 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 OPCMLQ14982 345 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 C4orf46Q504U0 113 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 C1orf134Q5TEV5 83 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 LINC00305Q7Z4B0 112 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 ZNF546Q86UE3 836 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 TMEM256Q8N2U0 113 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 OR10P1Q8NGE3 313 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 SAT2Q96F10 170 aaPredicted RBP13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 KRTAP1-5Q9BYS1 174 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 LINC00588Q9Y4M8 146 aa13.1□□□□□ -0.31
CDC42BPB-206ENST00000559790 S100A7P31151 101 aa13.09□□□□□ -0.31
CDC42BPB-206ENST00000559790 CDKN1BP46527 198 aa13.09□□□□□ -0.31
CDC42BPB-206ENST00000559790 GFI1BQ5VTD9 330 aa13.09□□□□□ -0.31
CDC42BPB-206ENST00000559790 LCN15Q6UWW0 184 aa13.09□□□□□ -0.31
CDC42BPB-206ENST00000559790 C16orf74Q96GX8 76 aa13.09□□□□□ -0.31
CDC42BPB-206ENST00000559790 C20orf85Q9H1P6 137 aa13.09□□□□□ -0.31
CDC42BPB-206ENST00000559790 NBDYA0A0U1RRE5 68 aa13.08□□□□□ -0.32
CDC42BPB-206ENST00000559790 CBY3A6NI87 242 aa13.08□□□□□ -0.32
CDC42BPB-206ENST00000559790 F5H768 121 aa13.08□□□□□ -0.32
CDC42BPB-206ENST00000559790 ATP5G1P05496 136 aa13.08□□□□□ -0.32
CDC42BPB-206ENST00000559790 ATP5G3P48201 142 aa13.08□□□□□ -0.32
CDC42BPB-206ENST00000559790 RHOBP62745 196 aa13.08□□□□□ -0.32
CDC42BPB-206ENST00000559790 PXDC1Q5TGL8 231 aa13.08□□□□□ -0.32
CDC42BPB-206ENST00000559790 TMEM263Q8WUH6 116 aaKnown RBP13.08□□□□□ -0.32
CDC42BPB-206ENST00000559790 LINC01587Q99440 93 aa13.08□□□□□ -0.32
CDC42BPB-206ENST00000559790 MGAT4CQ9UBM8 478 aa13.08□□□□□ -0.32
CDC42BPB-206ENST00000559790 DNAH5Q8TE73 4624 aa13.07□□□□□ -0.32
CDC42BPB-206ENST00000559790 SLC50A1Q9BRV3 221 aa13.07□□□□□ -0.32
CDC42BPB-206ENST00000559790 GGACTQ9BVM4 153 aa13.07□□□□□ -0.32
CDC42BPB-206ENST00000559790 NOP10Q9NPE3 64 aaKnown RBP13.07□□□□□ -0.32
CDC42BPB-206ENST00000559790 HOXA5P20719 270 aa13.06□□□□□ -0.32
CDC42BPB-206ENST00000559790 GSKIPQ9P0R6 139 aa13.06□□□□□ -0.32
CDC42BPB-206ENST00000559790 TIMM8BQ9Y5J9 83 aaPredicted RBP13.06□□□□□ -0.32
CDC42BPB-206ENST00000559790 TRAV5A0A0B4J249 113 aa13.05□□□□□ -0.32
CDC42BPB-206ENST00000559790 GOSR2O14653 212 aa13.05□□□□□ -0.32
CDC42BPB-206ENST00000559790 NUDT3O95989 172 aa13.05□□□□□ -0.32
CDC42BPB-206ENST00000559790 IL15RAQ13261 267 aa13.05□□□□□ -0.32
CDC42BPB-206ENST00000559790 VWC2Q2TAL6 325 aa13.05□□□□□ -0.32
CDC42BPB-206ENST00000559790 MIC13Q5XKP0 118 aa13.05□□□□□ -0.32
CDC42BPB-206ENST00000559790 SEC22CQ9BRL7 303 aa13.05□□□□□ -0.32
CDC42BPB-206ENST00000559790 WDR83OSQ9Y284 106 aa13.05□□□□□ -0.32
CDC42BPB-206ENST00000559790 NPIPB6E9PJ23 425 aa13.04□□□□□ -0.32
CDC42BPB-206ENST00000559790 H7BYZ3 331 aa13.04□□□□□ -0.32
CDC42BPB-206ENST00000559790 CT45A10P0DMU9 189 aa13.04□□□□□ -0.32
CDC42BPB-206ENST00000559790 HTN1P15515 57 aa13.04□□□□□ -0.32
CDC42BPB-206ENST00000559790 INPP1P49441 399 aa13.04□□□□□ -0.32
CDC42BPB-206ENST00000559790 ZNF493Q6ZR52 646 aa13.04□□□□□ -0.32
CDC42BPB-206ENST00000559790 BPIFA4PQ86YQ2 179 aa13.04□□□□□ -0.32
CDC42BPB-206ENST00000559790 C20orf144Q9BQM9 153 aa13.04□□□□□ -0.32
CDC42BPB-206ENST00000559790 ZNF586Q9NXT0 402 aa13.04□□□□□ -0.32
CDC42BPB-206ENST00000559790 COX7A2P2O60397 106 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms