RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 DEFA6Q01524 100 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 CT83Q5H943 113 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 C14orf144Q96I85 54 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 RNF114Q9Y508 228 aa8.63□□□□□ -1.03
SPG11-217ENST00000559511 KMT2BQ9UMN6 2715 aaPredicted RBP8.63□□□□□ -1.03
SPG11-217ENST00000559511 TRBV6-1A0A0K0K1D8 114 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 CENPVL3A0A0U1RRI6 287 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 SH2D7A6NKC9 451 aaPredicted RBP8.62□□□□□ -1.03
SPG11-217ENST00000559511 A8MWL6 223 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 NPIPB6E9PJ23 425 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 M0R3E3 92 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 NDUFS8O00217 210 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 ATP6V0E1O15342 81 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 BRS3P32247 399 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 ECSCRQ19T08 205 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 LYPD1Q8N2G4 141 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 TMEM75Q8N9X5 138 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 KCNS1Q96KK3 526 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 TMUB1Q9BVT8 246 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 SAMD10Q9BYL1 202 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 A0A1W2PS18 150 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 LINC01548A6NM66 108 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 A8MWP6 167 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 GPX1P07203 203 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 COL8A1P27658 744 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 PAX8Q06710 450 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 CLEC2AQ6UVW9 174 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 UNQ5815/PRO19632Q6UWF5 114 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 ATP5L2Q7Z4Y8 100 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 FAM110DQ8TAY7 271 aaPredicted RBP8.62□□□□□ -1.03
SPG11-217ENST00000559511 C18orf32Q8TCD1 76 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 NRGNQ92686 78 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 DAZAP1Q96EP5 407 aaKnown RBP8.62□□□□□ -1.03
SPG11-217ENST00000559511 ZC2HC1AQ96GY0 325 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 PGLYRP4Q96LB8 373 aa8.62□□□□□ -1.03
SPG11-217ENST00000559511 IGHV3OR16-10A0A075B7F0 116 aa8.61□□□□□ -1.03
SPG11-217ENST00000559511 IGHV3OR16-8A0A075B7F1 116 aa8.61□□□□□ -1.03
SPG11-217ENST00000559511 IGHV4-30-2A0A087WSY4 118 aa8.61□□□□□ -1.03
SPG11-217ENST00000559511 DIRC3C9JPN6 131 aa8.61□□□□□ -1.03
SPG11-217ENST00000559511 C15orf32Q32M92 178 aa8.61□□□□□ -1.03
SPG11-217ENST00000559511 NOL4LQ96MY1 436 aaPredicted RBP8.61□□□□□ -1.03
SPG11-217ENST00000559511 CSMD2Q7Z408 3487 aa8.61□□□□□ -1.03
SPG11-217ENST00000559511 IGHV3-35A0A0C4DH35 117 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 G3V318 75 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 PDE6HQ13956 83 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 PSG3Q16557 428 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 C16orf54Q6UWD8 224 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 OR2D3Q8NGH3 330 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 GFRA4Q9GZZ7 299 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 PSG8Q9UQ74 426 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 PMCHP20382 165 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 GPR183P32249 361 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 AMTP48728 403 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 HBBP68871 147 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 S100A7AQ86SG5 101 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 SIGLECL1Q8N7X8 197 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 ZNF502Q8TBZ5 544 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 VN1R17PQ8TDU5 208 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 TMEM190Q8WZ59 177 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 TXN2Q99757 166 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 FAM208BQ5VWN6 2430 aa8.6□□□□□ -1.03
SPG11-217ENST00000559511 ZNF705FA8MVS1 300 aaPredicted RBP8.59□□□□□ -1.03
SPG11-217ENST00000559511 K7EQM0 130 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 ZNF705DP0CH99 300 aaPredicted RBP8.59□□□□□ -1.03
SPG11-217ENST00000559511 ZNF705BP0CI00 300 aaPredicted RBP8.59□□□□□ -1.03
SPG11-217ENST00000559511 CRIP1P50238 77 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 RHOGP84095 191 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 TOMM20LQ6UXN7 152 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 RBPMS2Q6ZRY4 209 aaKnown RBP8.59□□□□□ -1.03
SPG11-217ENST00000559511 REC114Q7Z4M0 266 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 TMEM219Q86XT9 240 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 C5orf56Q8N8D9 126 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 ALKBH7Q9BT30 221 aaPredicted RBP8.59□□□□□ -1.03
SPG11-217ENST00000559511 RABAC1Q9UI14 185 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 ZFP30Q9Y2G7 519 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 SMAD5-AS1Q9Y6J3 95 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 ANKRD17O75179 2603 aaKnown RBP8.59□□□□□ -1.03
SPG11-217ENST00000559511 ZNF324O75467 553 aaPredicted RBP8.59□□□□□ -1.03
SPG11-217ENST00000559511 KLK9Q2XQG4 91 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 FAM19A2Q8N3H0 131 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 OR4B1Q8NGF8 309 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 C8orf49Q96NF6 230 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 AAMDCQ9H7C9 122 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 NRN1Q9NPD7 142 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 KLK9Q9UKQ9 250 aa8.59□□□□□ -1.03
SPG11-217ENST00000559511 LRRK2Q5S007 2527 aa8.58□□□□□ -1.04
SPG11-217ENST00000559511 A1L4Q6 167 aa8.58□□□□□ -1.04
SPG11-217ENST00000559511 FAM231BA6NCW3 169 aa8.58□□□□□ -1.04
SPG11-217ENST00000559511 APOHP02749 345 aaPredicted RBP8.58□□□□□ -1.04
SPG11-217ENST00000559511 CLEC3BP05452 202 aa8.58□□□□□ -1.04
SPG11-217ENST00000559511 RPL7P18124 248 aaKnown RBP8.58□□□□□ -1.04
SPG11-217ENST00000559511 KLF5Q13887 457 aaPredicted RBP8.58□□□□□ -1.04
SPG11-217ENST00000559511 TDRG1Q3Y452 100 aa8.58□□□□□ -1.04
SPG11-217ENST00000559511 BRD3OSQ6XYD6 125 aa8.58□□□□□ -1.04
SPG11-217ENST00000559511 CCDC140Q96MF4 163 aa8.58□□□□□ -1.04
SPG11-217ENST00000559511 ZFAND3Q9H8U3 227 aa8.58□□□□□ -1.04
SPG11-217ENST00000559511 SOX21Q9Y651 276 aaPredicted RBP8.58□□□□□ -1.04
SPG11-217ENST00000559511 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.57□□□□□ -1.044e-6■■■■□ 20.6
SPG11-217ENST00000559511 KIR2DL5BA0A0G2JN68 375 aa8.57□□□□□ -1.04
SPG11-217ENST00000559511 KIR2DL5BA0A0G2JPC4 375 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms