RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 IGLL5B9A064 214 aa9.09□□□□□ -0.95
LRRC28-214ENST00000559433 BAXQ07812 192 aa9.09□□□□□ -0.95
LRRC28-214ENST00000559433 VWC2Q2TAL6 325 aa9.09□□□□□ -0.95
LRRC28-214ENST00000559433 C10orf113Q5VZT2 155 aa9.09□□□□□ -0.95
LRRC28-214ENST00000559433 WDR83OSQ9Y284 106 aa9.09□□□□□ -0.95
LRRC28-214ENST00000559433 DUSP14O95147 198 aaKnown RBP9.08□□□□□ -0.96
LRRC28-214ENST00000559433 HLA-DMBP28068 263 aa9.08□□□□□ -0.96
LRRC28-214ENST00000559433 TCTAP57738 103 aa9.08□□□□□ -0.96
LRRC28-214ENST00000559433 LRRC37A5PQ49AS3 106 aa9.08□□□□□ -0.96
LRRC28-214ENST00000559433 MIC13Q5XKP0 118 aa9.08□□□□□ -0.96
LRRC28-214ENST00000559433 ZNF705AQ6ZN79 300 aaPredicted RBP9.08□□□□□ -0.96
LRRC28-214ENST00000559433 Q6ZRG5 221 aa9.08□□□□□ -0.96
LRRC28-214ENST00000559433 TMEM37Q8WXS4 190 aa9.08□□□□□ -0.96
LRRC28-214ENST00000559433 MARVELD1Q9BSK0 173 aa9.08□□□□□ -0.96
LRRC28-214ENST00000559433 NMES1Q9C002 83 aa9.08□□□□□ -0.96
LRRC28-214ENST00000559433 PPP1R14DQ9NXH3 145 aa9.08□□□□□ -0.96
LRRC28-214ENST00000559433 GOLT1BQ9Y3E0 138 aa9.08□□□□□ -0.96
LRRC28-214ENST00000559433 TRAV10A0A0B4J240 114 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 TMEM189A5PLL7 270 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 SMIM9A6NGZ8 99 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 A8MTW9 85 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 ZNF705FA8MVS1 300 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-214ENST00000559433 MRPS12O15235 138 aaKnown RBP9.07□□□□□ -0.96
LRRC28-214ENST00000559433 SSNA1O43805 119 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 RLN2P04090 185 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 ZNF705DP0CH99 300 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-214ENST00000559433 ZNF705BP0CI00 300 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-214ENST00000559433 FGF7P21781 194 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 CNN1P51911 297 aaKnown RBP9.07□□□□□ -0.96
LRRC28-214ENST00000559433 EMP1P54849 157 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 TNP2Q05952 138 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 OPCMLQ14982 345 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 BPIFA4PQ86YQ2 179 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 OR1L4Q8NGR5 311 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 PFDN5Q99471 154 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 NEU1Q99519 415 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 TMEM208Q9BTX3 173 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 DNAJC4Q9NNZ3 241 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 CELA1Q9UNI1 258 aa9.07□□□□□ -0.96
LRRC28-214ENST00000559433 E5RGE8 158 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 SNRPCP09234 159 aaKnown RBP9.06□□□□□ -0.96
LRRC28-214ENST00000559433 CXCL2P19875 107 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 CXCL3P19876 107 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 RPL29P47914 159 aaKnown RBP9.06□□□□□ -0.96
LRRC28-214ENST00000559433 B2MP61769 119 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 CYCSP99999 105 aaKnown RBP9.06□□□□□ -0.96
LRRC28-214ENST00000559433 HIST1H1AQ02539 215 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-214ENST00000559433 ATP6V1FQ16864 119 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 MORN5Q5VZ52 161 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 LGALS9CQ6DKI2 356 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 LCN15Q6UWW0 184 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 AMTNQ6UX39 209 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 Q6ZTC4 211 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 OR11H7Q8NGC8 314 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 SLC25A31Q9H0C2 315 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 SLC39A9Q9NUM3 307 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 OR5AC2Q9NZP5 309 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 RFNGQ9Y644 331 aa9.06□□□□□ -0.96
LRRC28-214ENST00000559433 H3BTX0 84 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 M0R2Z0 102 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 MPDU1O75352 247 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 HBE1P02100 147 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 AMBPP02760 352 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 SPART-AS1P0CW21 52 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 H2BFSP57053 126 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 NHLH2Q02577 135 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 PSG3Q16557 428 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 SPINK13Q1W4C9 94 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 ZNF767PQ75MW2 155 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 OR8A1Q8NGG7 326 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 OR5C1Q8NGR4 320 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 SLC50A1Q9BRV3 221 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 ZNF331Q9NQX6 463 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-214ENST00000559433 PXMP4Q9Y6I8 212 aa9.05□□□□□ -0.96
LRRC28-214ENST00000559433 TRAV5A0A0B4J249 113 aa9.04□□□□□ -0.96
LRRC28-214ENST00000559433 BOLA2-SMG1P6H3BVE0 249 aa9.04□□□□□ -0.96
LRRC28-214ENST00000559433 SLC17A3O00476 420 aa9.04□□□□□ -0.96
LRRC28-214ENST00000559433 INSP01308 110 aa9.04□□□□□ -0.96
LRRC28-214ENST00000559433 PRB4P10163 310 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-214ENST00000559433 RHOBP62745 196 aa9.04□□□□□ -0.96
LRRC28-214ENST00000559433 C12orf74Q32Q52 190 aa9.04□□□□□ -0.96
LRRC28-214ENST00000559433 C1orf158Q8N1D5 194 aa9.04□□□□□ -0.96
LRRC28-214ENST00000559433 THAP6Q8TBB0 222 aa9.04□□□□□ -0.96
LRRC28-214ENST00000559433 CHAC2Q8WUX2 184 aa9.04□□□□□ -0.96
LRRC28-214ENST00000559433 PPP1R1CQ8WVI7 109 aa9.04□□□□□ -0.96
LRRC28-214ENST00000559433 RPUSD4Q96CM3 377 aaKnown RBP9.04□□□□□ -0.96
LRRC28-214ENST00000559433 IGF2BP2-AS1Q96M15 143 aa9.04□□□□□ -0.96
LRRC28-214ENST00000559433 NPCDR1Q9BY65 106 aa9.04□□□□□ -0.96
LRRC28-214ENST00000559433 DEFB131BA0A096LNP1 70 aa9.03□□□□□ -0.96
LRRC28-214ENST00000559433 TEX48A0A1B0GUV7 120 aa9.03□□□□□ -0.96
LRRC28-214ENST00000559433 H0YIZ8 118 aa9.03□□□□□ -0.96
LRRC28-214ENST00000559433 PET100P0DJ07 73 aa9.03□□□□□ -0.96
LRRC28-214ENST00000559433 IGLC2P0DOY2 106 aa9.03□□□□□ -0.96
LRRC28-214ENST00000559433 CLINT1Q14677 625 aa9.03□□□□□ -0.96
LRRC28-214ENST00000559433 RRN3P1Q2M238 152 aa9.03□□□□□ -0.96
LRRC28-214ENST00000559433 BAP18Q8IXM2 172 aa9.03□□□□□ -0.96
LRRC28-214ENST00000559433 TRAV12-2A0A075B6T6 113 aa9.02□□□□□ -0.97
LRRC28-214ENST00000559433 LOC102723971A0A1B0GUV8 181 aa9.02□□□□□ -0.97
LRRC28-214ENST00000559433 H3BQ15 152 aa9.02□□□□□ -0.97
LRRC28-214ENST00000559433 CRXO43186 299 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms