RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 RNF24Q9Y225 148 aa12.64□□□□□ -0.39
TPM1-219ENST00000559397 B4DEV8 164 aa12.64□□□□□ -0.39
TPM1-219ENST00000559397 LINC01619G3V211 115 aa12.64□□□□□ -0.39
TPM1-219ENST00000559397 CCL24O00175 119 aa12.64□□□□□ -0.39
TPM1-219ENST00000559397 IGLC2P0DOY2 106 aa12.64□□□□□ -0.39
TPM1-219ENST00000559397 DERL1Q9BUN8 251 aa12.64□□□□□ -0.39
TPM1-219ENST00000559397 ZNF586Q9NXT0 402 aa12.64□□□□□ -0.39
TPM1-219ENST00000559397 A0A087WWC5 75 aa12.63□□□□□ -0.39
TPM1-219ENST00000559397 IGHV3-35A0A0C4DH35 117 aa12.63□□□□□ -0.39
TPM1-219ENST00000559397 GGCTO75223 188 aaKnown RBP12.63□□□□□ -0.39
TPM1-219ENST00000559397 S100A7P31151 101 aa12.63□□□□□ -0.39
TPM1-219ENST00000559397 TMEM88Q6PEY1 159 aa12.63□□□□□ -0.39
TPM1-219ENST00000559397 CBLN2Q8IUK8 224 aa12.63□□□□□ -0.39
TPM1-219ENST00000559397 C2CD4CQ8TF44 421 aa12.63□□□□□ -0.39
TPM1-219ENST00000559397 TCEAL7Q9BRU2 100 aa12.63□□□□□ -0.39
TPM1-219ENST00000559397 CRYBB3P26998 211 aa12.62□□□□□ -0.39
TPM1-219ENST00000559397 AKR1C3P42330 323 aa12.62□□□□□ -0.39
TPM1-219ENST00000559397 RPL23P62829 140 aaKnown RBP12.62□□□□□ -0.39
TPM1-219ENST00000559397 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
TPM1-219ENST00000559397 DPF1Q92782 380 aa12.62□□□□□ -0.39
TPM1-219ENST00000559397 SMCO4Q9NRQ5 59 aa12.62□□□□□ -0.39
TPM1-219ENST00000559397 TRBV20OR9-2A0A075B6H5 130 aa12.61□□□□□ -0.39
TPM1-219ENST00000559397 HOXD3P31249 432 aaPredicted RBP12.61□□□□□ -0.39
TPM1-219ENST00000559397 SLURP1P55000 103 aa12.61□□□□□ -0.39
TPM1-219ENST00000559397 RANP62826 216 aaKnown RBP12.61□□□□□ -0.39
TPM1-219ENST00000559397 OR4F17Q8NGA8 305 aa12.61□□□□□ -0.39
TPM1-219ENST00000559397 TMEM190Q8WZ59 177 aa12.61□□□□□ -0.39
TPM1-219ENST00000559397 TUBA4BQ9H853 241 aa12.61□□□□□ -0.39
TPM1-219ENST00000559397 TRBV19A0A075B6N1 114 aa12.61□□□□□ -0.39
TPM1-219ENST00000559397 SNRPCP09234 159 aaKnown RBP12.61□□□□□ -0.39
TPM1-219ENST00000559397 RPEL1Q2QD12 228 aa12.61□□□□□ -0.39
TPM1-219ENST00000559397 GPHB5Q86YW7 130 aa12.61□□□□□ -0.39
TPM1-219ENST00000559397 U3KQE9 123 aa12.61□□□□□ -0.39
TPM1-219ENST00000559397 C9JCJ5 164 aa12.6□□□□□ -0.39
TPM1-219ENST00000559397 TSPAN4O14817 238 aa12.6□□□□□ -0.39
TPM1-219ENST00000559397 RPL7P18124 248 aaKnown RBP12.6□□□□□ -0.39
TPM1-219ENST00000559397 KLF5Q13887 457 aaPredicted RBP12.6□□□□□ -0.39
TPM1-219ENST00000559397 OTORQ9NRC9 128 aa12.6□□□□□ -0.39
TPM1-219ENST00000559397 VWFP04275 2813 aa12.59□□□□□ -0.39
TPM1-219ENST00000559397 PGPA6NDG6 321 aa12.59□□□□□ -0.39
TPM1-219ENST00000559397 NDUFA4O00483 81 aa12.59□□□□□ -0.39
TPM1-219ENST00000559397 BUB3O43684 328 aa12.59□□□□□ -0.39
TPM1-219ENST00000559397 RPL35P42766 123 aaKnown RBP12.59□□□□□ -0.39
TPM1-219ENST00000559397 ADIRFQ15847 76 aa12.59□□□□□ -0.39
TPM1-219ENST00000559397 LINC01551Q86U37 167 aa12.59□□□□□ -0.39
TPM1-219ENST00000559397 SPATA3Q8NHX4 192 aa12.59□□□□□ -0.39
TPM1-219ENST00000559397 HIST1H2BAQ96A08 127 aa12.59□□□□□ -0.39
TPM1-219ENST00000559397 Q9H3A6 140 aa12.59□□□□□ -0.39
TPM1-219ENST00000559397 EPDR1Q9UM22 224 aa12.59□□□□□ -0.39
TPM1-219ENST00000559397 LY96Q9Y6Y9 160 aa12.59□□□□□ -0.39
TPM1-219ENST00000559397 IGHV3OR16-8A0A075B7F1 116 aa12.58□□□□□ -0.4
TPM1-219ENST00000559397 HELTA6NFD8 242 aa12.58□□□□□ -0.4
TPM1-219ENST00000559397 H3BTX0 84 aa12.58□□□□□ -0.4
TPM1-219ENST00000559397 PEX7O00628 323 aa12.58□□□□□ -0.4
TPM1-219ENST00000559397 PDE6HQ13956 83 aa12.58□□□□□ -0.4
TPM1-219ENST00000559397 UNQ9165/PRO28630Q6UXU0 137 aa12.58□□□□□ -0.4
TPM1-219ENST00000559397 LYPD1Q8N2G4 141 aa12.58□□□□□ -0.4
TPM1-219ENST00000559397 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.58□□□□□ -0.4
TPM1-219ENST00000559397 DLX4Q92988 240 aaPredicted RBP12.58□□□□□ -0.4
TPM1-219ENST00000559397 TMEM242Q9NWH2 141 aa12.58□□□□□ -0.4
TPM1-219ENST00000559397 M0QZ24 198 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 C1orf194Q5T5A4 169 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 LINC00482Q8N8I6 264 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 C5orf17Q8NAS9 161 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 C17orf77Q96MU5 243 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 METTL26Q96S19 204 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 SMAD5-AS1Q9Y6J3 95 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 WNK1Q9H4A3 2382 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 PF4P02776 101 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 SLC25A5P05141 298 aaKnown RBP12.57□□□□□ -0.4
TPM1-219ENST00000559397 SYNJ2BPP57105 145 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 TAS2R60P59551 318 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 FAM106AQ4KMX7 169 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 SIGLEC15Q6ZMC9 328 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 REC114Q7Z4M0 266 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 C1QL4Q86Z23 238 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 OR8I2Q8N0Y5 310 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 CTDSP1Q9GZU7 261 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 PRELID1Q9Y255 219 aa12.57□□□□□ -0.4
TPM1-219ENST00000559397 LGALS9O00182 355 aa12.56□□□□□ -0.4
TPM1-219ENST00000559397 RNF212Q495C1 297 aa12.56□□□□□ -0.4
TPM1-219ENST00000559397 OCC1Q8TAD7 63 aa12.56□□□□□ -0.4
TPM1-219ENST00000559397 ISOC2Q96AB3 205 aa12.56□□□□□ -0.4
TPM1-219ENST00000559397 IGF2BP2-AS1Q96M15 143 aa12.56□□□□□ -0.4
TPM1-219ENST00000559397 YPEL4Q96NS1 127 aa12.56□□□□□ -0.4
TPM1-219ENST00000559397 GPR82Q96P67 336 aa12.56□□□□□ -0.4
TPM1-219ENST00000559397 KLF12Q9Y4X4 402 aa12.56□□□□□ -0.4
TPM1-219ENST00000559397 A0A087X0K7 114 aa12.55□□□□□ -0.4
TPM1-219ENST00000559397 CXorf65A6NEN9 183 aa12.55□□□□□ -0.4
TPM1-219ENST00000559397 PGPEP1LA6NFU8 196 aa12.55□□□□□ -0.4
TPM1-219ENST00000559397 COLCA2A8K830 154 aa12.55□□□□□ -0.4
TPM1-219ENST00000559397 MT-ND4LP03901 98 aa12.55□□□□□ -0.4
TPM1-219ENST00000559397 CENPWQ5EE01 88 aa12.55□□□□□ -0.4
TPM1-219ENST00000559397 ATG101Q9BSB4 218 aa12.55□□□□□ -0.4
TPM1-219ENST00000559397 ZNF320A2RRD8 509 aa12.54□□□□□ -0.4
TPM1-219ENST00000559397 SLC17A3O00476 420 aa12.54□□□□□ -0.4
TPM1-219ENST00000559397 ZNF253O75346 499 aa12.54□□□□□ -0.4
TPM1-219ENST00000559397 APOHP02749 345 aaPredicted RBP12.54□□□□□ -0.4
TPM1-219ENST00000559397 CNN1P51911 297 aaKnown RBP12.54□□□□□ -0.4
TPM1-219ENST00000559397 GNG5P63218 68 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms