RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 STOML3Q8TAV4 291 aa16.06■□□□□ 0.16
SNX1-206ENST00000559389 CDC34P49427 236 aaPredicted RBP16.05■□□□□ 0.16
SNX1-206ENST00000559389 TAS2R45P59539 299 aa16.05■□□□□ 0.16
SNX1-206ENST00000559389 GUK1Q16774 197 aa16.05■□□□□ 0.16
SNX1-206ENST00000559389 RPP25LQ8N5L8 163 aaKnown RBP16.05■□□□□ 0.16
SNX1-206ENST00000559389 ZNF503Q96F45 646 aa16.05■□□□□ 0.16
SNX1-206ENST00000559389 SLC50A1Q9BRV3 221 aa16.05■□□□□ 0.16
SNX1-206ENST00000559389 ZNF331Q9NQX6 463 aaPredicted RBP16.05■□□□□ 0.16
SNX1-206ENST00000559389 ZNF586Q9NXT0 402 aa16.05■□□□□ 0.16
SNX1-206ENST00000559389 A0A1W2PPV4 95 aa16.04■□□□□ 0.16
SNX1-206ENST00000559389 RBMY1BA6NDE4 496 aaKnown RBP16.04■□□□□ 0.16
SNX1-206ENST00000559389 RBMY1EA6NEQ0 496 aaKnown RBP16.04■□□□□ 0.16
SNX1-206ENST00000559389 SLC17A3O00476 420 aa16.04■□□□□ 0.16
SNX1-206ENST00000559389 SNRPCP09234 159 aaKnown RBP16.04■□□□□ 0.16
SNX1-206ENST00000559389 RBMY1DP0C7P1 496 aaKnown RBP16.04■□□□□ 0.16
SNX1-206ENST00000559389 HIST1H1EP10412 219 aaKnown RBP16.04■□□□□ 0.16
SNX1-206ENST00000559389 TPT1P13693 172 aaKnown RBP16.04■□□□□ 0.16
SNX1-206ENST00000559389 C20orf173Q96LM9 149 aa16.04■□□□□ 0.16
SNX1-206ENST00000559389 OR51M1Q9H341 326 aa16.04■□□□□ 0.16
SNX1-206ENST00000559389 RPRMQ9NS64 109 aa16.04■□□□□ 0.16
SNX1-206ENST00000559389 H3BTX0 84 aa16.03■□□□□ 0.16
SNX1-206ENST00000559389 OR7C2O60412 319 aa16.03■□□□□ 0.16
SNX1-206ENST00000559389 ZNF253O75346 499 aa16.03■□□□□ 0.16
SNX1-206ENST00000559389 EIF3GO75821 320 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNX1-206ENST00000559389 SEC11BP0C7V7 166 aa16.03■□□□□ 0.16
SNX1-206ENST00000559389 AKR1C8PQ5T2L2 129 aa16.03■□□□□ 0.16
SNX1-206ENST00000559389 BAP18Q8IXM2 172 aa16.03■□□□□ 0.16
SNX1-206ENST00000559389 SAT2Q96F10 170 aaPredicted RBP16.03■□□□□ 0.16
SNX1-206ENST00000559389 LINC00052Q96N35 136 aa16.03■□□□□ 0.16
SNX1-206ENST00000559389 B9D2Q9BPU9 175 aa16.03■□□□□ 0.16
SNX1-206ENST00000559389 PAXXQ9BUH6 204 aa16.03■□□□□ 0.16
SNX1-206ENST00000559389 TRBV19A0A075B6N1 114 aa16.02■□□□□ 0.16
SNX1-206ENST00000559389 UBE2L3P68036 154 aaKnown RBP16.02■□□□□ 0.16
SNX1-206ENST00000559389 RNF182Q8N6D2 247 aa16.02■□□□□ 0.16
SNX1-206ENST00000559389 FXYD5Q96DB9 178 aa16.02■□□□□ 0.16
SNX1-206ENST00000559389 KNCNA6PVL3 124 aa16.01■□□□□ 0.15
SNX1-206ENST00000559389 OR10J4P0C629 311 aa16.01■□□□□ 0.15
SNX1-206ENST00000559389 NKX2-5P52952 324 aaPredicted RBP16.01■□□□□ 0.15
SNX1-206ENST00000559389 PDE6HQ13956 83 aa16.01■□□□□ 0.15
SNX1-206ENST00000559389 IGFL4Q6B9Z1 124 aa16.01■□□□□ 0.15
SNX1-206ENST00000559389 PQLC2Q6ZP29 291 aa16.01■□□□□ 0.15
SNX1-206ENST00000559389 LRRC20Q8TCA0 184 aa16.01■□□□□ 0.15
SNX1-206ENST00000559389 RNF141Q8WVD5 230 aa16.01■□□□□ 0.15
SNX1-206ENST00000559389 RAB24Q969Q5 203 aa16.01■□□□□ 0.15
SNX1-206ENST00000559389 ACTR3CQ9C0K3 210 aaPredicted RBP16.01■□□□□ 0.15
SNX1-206ENST00000559389 LOC102724200A0A096LPH7 203 aaPredicted RBP16■□□□□ 0.15
SNX1-206ENST00000559389 NDUFB4O95168 129 aa16■□□□□ 0.15
SNX1-206ENST00000559389 C4BPBP20851 252 aa16■□□□□ 0.15
SNX1-206ENST00000559389 HLA-DMBP28068 263 aa16■□□□□ 0.15
SNX1-206ENST00000559389 SLC51BQ86UW2 128 aa16■□□□□ 0.15
SNX1-206ENST00000559389 HMGB3O15347 200 aaKnown RBP15.99■□□□□ 0.15
SNX1-206ENST00000559389 NBEAP1P0C6P0 100 aa15.99■□□□□ 0.15
SNX1-206ENST00000559389 STAG3L2P0CL84 134 aa15.99■□□□□ 0.15
SNX1-206ENST00000559389 STAG3L3P0CL85 134 aa15.99■□□□□ 0.15
SNX1-206ENST00000559389 DEFB1P60022 68 aa15.99■□□□□ 0.15
SNX1-206ENST00000559389 ZNF726P1Q15940 193 aa15.99■□□□□ 0.15
SNX1-206ENST00000559389 ACTL10Q5JWF8 245 aa15.99■□□□□ 0.15
SNX1-206ENST00000559389 FOXI2Q6ZQN5 318 aa15.99■□□□□ 0.15
SNX1-206ENST00000559389 SSX7Q7RTT5 188 aa15.99■□□□□ 0.15
SNX1-206ENST00000559389 TRPT1Q86TN4 253 aaKnown RBP15.99■□□□□ 0.15
SNX1-206ENST00000559389 BLNKQ8WV28 456 aa15.99■□□□□ 0.15
SNX1-206ENST00000559389 TMED6Q8WW62 240 aa15.99■□□□□ 0.15
SNX1-206ENST00000559389 PLA2G2EQ9NZK7 142 aa15.99■□□□□ 0.15
SNX1-206ENST00000559389 CTXND1A0A1B0GTU2 59 aa15.98■□□□□ 0.15
SNX1-206ENST00000559389 ARL14EPLP0DKL9 152 aa15.98■□□□□ 0.15
SNX1-206ENST00000559389 HLA-DRB4P13762 266 aa15.98■□□□□ 0.15
SNX1-206ENST00000559389 PSG3Q16557 428 aa15.98■□□□□ 0.15
SNX1-206ENST00000559389 GDF5OSQ5U4N7 250 aa15.98■□□□□ 0.15
SNX1-206ENST00000559389 SBSPONQ8IVN8 264 aa15.98■□□□□ 0.15
SNX1-206ENST00000559389 STHQ8IWL8 128 aa15.98■□□□□ 0.15
SNX1-206ENST00000559389 ZNF738Q8NE65 137 aa15.98■□□□□ 0.15
SNX1-206ENST00000559389 SAV1Q9H4B6 383 aaPredicted RBP15.98■□□□□ 0.15
SNX1-206ENST00000559389 CLEC5AQ9NY25 188 aa15.98■□□□□ 0.15
SNX1-206ENST00000559389 HLA-DRB4X5D2U9 266 aa15.98■□□□□ 0.15
SNX1-206ENST00000559389 UMAD1C9J7I0 102 aa15.97■□□□□ 0.15
SNX1-206ENST00000559389 RPL35AP18077 110 aaKnown RBP15.97■□□□□ 0.15
SNX1-206ENST00000559389 HAGHQ16775 308 aa15.97■□□□□ 0.15
SNX1-206ENST00000559389 PHYHIPLQ96FC7 376 aa15.97■□□□□ 0.15
SNX1-206ENST00000559389 KIR2DL5BA0A0G2JN68 375 aa15.96■□□□□ 0.15
SNX1-206ENST00000559389 KIR2DL5BA0A0G2JPC4 375 aa15.96■□□□□ 0.15
SNX1-206ENST00000559389 A0A0J9YX75 114 aa15.96■□□□□ 0.15
SNX1-206ENST00000559389 F6UB75 175 aa15.96■□□□□ 0.15
SNX1-206ENST00000559389 H3BMM0 161 aa15.96■□□□□ 0.15
SNX1-206ENST00000559389 PSG9Q00887 426 aa15.96■□□□□ 0.15
SNX1-206ENST00000559389 KIR2DL5AQ8N109 375 aa15.96■□□□□ 0.15
SNX1-206ENST00000559389 KIR2DL5BQ8NHK3 375 aa15.96■□□□□ 0.15
SNX1-206ENST00000559389 ASCL2Q99929 193 aa15.96■□□□□ 0.15
SNX1-206ENST00000559389 CXorf1O96002 111 aa15.95■□□□□ 0.14
SNX1-206ENST00000559389 APOC4P55056 127 aa15.95■□□□□ 0.14
SNX1-206ENST00000559389 EIF5AL1Q6IS14 154 aaKnown RBP15.95■□□□□ 0.14
SNX1-206ENST00000559389 MRPL53Q96EL3 112 aaKnown RBP15.95■□□□□ 0.14
SNX1-206ENST00000559389 GCHFRP30047 84 aa15.94■□□□□ 0.14
SNX1-206ENST00000559389 FHITP49789 147 aa15.94■□□□□ 0.14
SNX1-206ENST00000559389 EBLN2Q6P2I7 272 aa15.94■□□□□ 0.14
SNX1-206ENST00000559389 EXOC3-AS1Q8N2X6 119 aa15.94■□□□□ 0.14
SNX1-206ENST00000559389 RPUSD4Q96CM3 377 aaKnown RBP15.94■□□□□ 0.14
SNX1-206ENST00000559389 AAMDCQ9H7C9 122 aa15.94■□□□□ 0.14
SNX1-206ENST00000559389 PRELID1Q9Y255 219 aa15.94■□□□□ 0.14
SNX1-206ENST00000559389 A8MTW9 85 aa15.93■□□□□ 0.14
SNX1-206ENST00000559389 DPPA3Q6W0C5 159 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms