RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 RAB2AP61019 212 aa12.54□□□□□ -0.4
PSEN1-224ENST00000559361 RPL11P62913 178 aaKnown RBP12.54□□□□□ -0.4
PSEN1-224ENST00000559361 ACTR3CQ9C0K3 210 aaPredicted RBP12.54□□□□□ -0.4
PSEN1-224ENST00000559361 A0A087X0K7 114 aa12.53□□□□□ -0.4
PSEN1-224ENST00000559361 ATF4P18848 351 aaPredicted RBP12.53□□□□□ -0.4
PSEN1-224ENST00000559361 CMC4P56277 68 aaPredicted RBP12.53□□□□□ -0.4
PSEN1-224ENST00000559361 GUK1Q16774 197 aa12.53□□□□□ -0.4
PSEN1-224ENST00000559361 HAGHQ16775 308 aa12.53□□□□□ -0.4
PSEN1-224ENST00000559361 PQLC2Q6ZP29 291 aa12.53□□□□□ -0.4
PSEN1-224ENST00000559361 RPP25LQ8N5L8 163 aaKnown RBP12.53□□□□□ -0.4
PSEN1-224ENST00000559361 TMED6Q8WW62 240 aa12.53□□□□□ -0.4
PSEN1-224ENST00000559361 RPRMQ9NS64 109 aa12.53□□□□□ -0.4
PSEN1-224ENST00000559361 DNASE2O00115 360 aaPredicted RBP12.52□□□□□ -0.41
PSEN1-224ENST00000559361 LEMD1Q68G75 181 aa12.52□□□□□ -0.41
PSEN1-224ENST00000559361 MS4A6AQ9H2W1 248 aa12.52□□□□□ -0.41
PSEN1-224ENST00000559361 HRH4Q9H3N8 390 aa12.52□□□□□ -0.41
PSEN1-224ENST00000559361 RFNGQ9Y644 331 aa12.52□□□□□ -0.41
PSEN1-224ENST00000559361 HERC2O95714 4834 aa12.51□□□□□ -0.41
PSEN1-224ENST00000559361 CTXND1A0A1B0GTU2 59 aa12.51□□□□□ -0.41
PSEN1-224ENST00000559361 ZNF785A8K8V0 405 aa12.51□□□□□ -0.41
PSEN1-224ENST00000559361 GUCA2BQ16661 112 aa12.51□□□□□ -0.41
PSEN1-224ENST00000559361 MORN5Q5VZ52 161 aa12.51□□□□□ -0.41
PSEN1-224ENST00000559361 FAM122CQ6P4D5 195 aa12.51□□□□□ -0.41
PSEN1-224ENST00000559361 LCN15Q6UWW0 184 aa12.51□□□□□ -0.41
PSEN1-224ENST00000559361 MIR17HGQ75NE6 70 aa12.51□□□□□ -0.41
PSEN1-224ENST00000559361 GTSCR1Q86UQ5 136 aa12.51□□□□□ -0.41
PSEN1-224ENST00000559361 FAM110AQ9BQ89 295 aa12.51□□□□□ -0.41
PSEN1-224ENST00000559361 SLC25A2Q9BXI2 301 aa12.51□□□□□ -0.41
PSEN1-224ENST00000559361 CLEC5AQ9NY25 188 aa12.51□□□□□ -0.41
PSEN1-224ENST00000559361 MRPS12O15235 138 aaKnown RBP12.5□□□□□ -0.41
PSEN1-224ENST00000559361 OR7C2O60412 319 aa12.5□□□□□ -0.41
PSEN1-224ENST00000559361 ZNF253O75346 499 aa12.5□□□□□ -0.41
PSEN1-224ENST00000559361 IGLC2P0DOY2 106 aa12.5□□□□□ -0.41
PSEN1-224ENST00000559361 HIST1H1EP10412 219 aaKnown RBP12.5□□□□□ -0.41
PSEN1-224ENST00000559361 PDE6HQ13956 83 aa12.5□□□□□ -0.41
PSEN1-224ENST00000559361 IL17DQ8TAD2 202 aa12.5□□□□□ -0.41
PSEN1-224ENST00000559361 DCANP1Q8TF63 244 aa12.5□□□□□ -0.41
PSEN1-224ENST00000559361 RAB24Q969Q5 203 aa12.5□□□□□ -0.41
PSEN1-224ENST00000559361 FAM167A-AS1Q96KT0 104 aa12.5□□□□□ -0.41
PSEN1-224ENST00000559361 OR51M1Q9H341 326 aa12.5□□□□□ -0.41
PSEN1-224ENST00000559361 IZUMO1RA6ND01 250 aa12.49□□□□□ -0.41
PSEN1-224ENST00000559361 STAG3L2P0CL84 134 aa12.49□□□□□ -0.41
PSEN1-224ENST00000559361 STAG3L3P0CL85 134 aa12.49□□□□□ -0.41
PSEN1-224ENST00000559361 ID1P41134 155 aa12.49□□□□□ -0.41
PSEN1-224ENST00000559361 SULT1A2P50226 295 aa12.49□□□□□ -0.41
PSEN1-224ENST00000559361 SNRPD3P62318 126 aaKnown RBP12.49□□□□□ -0.41
PSEN1-224ENST00000559361 SPATA31B1PQ5VZV4 182 aa12.49□□□□□ -0.41
PSEN1-224ENST00000559361 SLC50A1Q9BRV3 221 aa12.49□□□□□ -0.41
PSEN1-224ENST00000559361 PAXXQ9BUH6 204 aa12.49□□□□□ -0.41
PSEN1-224ENST00000559361 BOLA1Q9Y3E2 137 aa12.49□□□□□ -0.41
PSEN1-224ENST00000559361 TRAV5A0A0B4J249 113 aa12.48□□□□□ -0.41
PSEN1-224ENST00000559361 K7EQG2 157 aa12.48□□□□□ -0.41
PSEN1-224ENST00000559361 ISLRO14498 428 aa12.48□□□□□ -0.41
PSEN1-224ENST00000559361 CXorf1O96002 111 aa12.48□□□□□ -0.41
PSEN1-224ENST00000559361 PSMB3P49720 205 aa12.48□□□□□ -0.41
PSEN1-224ENST00000559361 IGKV3-7A0A075B6H7 116 aa12.47□□□□□ -0.41
PSEN1-224ENST00000559361 TEX46H3BTG2 121 aa12.47□□□□□ -0.41
PSEN1-224ENST00000559361 UBE2L3P68036 154 aaKnown RBP12.47□□□□□ -0.41
PSEN1-224ENST00000559361 FAM213BQ8TBF2 198 aa12.47□□□□□ -0.41
PSEN1-224ENST00000559361 RNF141Q8WVD5 230 aa12.47□□□□□ -0.41
PSEN1-224ENST00000559361 TMEM167BQ9NRX6 74 aa12.47□□□□□ -0.41
PSEN1-224ENST00000559361 TRBV19A0A075B6N1 114 aa12.46□□□□□ -0.41
PSEN1-224ENST00000559361 SOCS3O14543 225 aa12.46□□□□□ -0.41
PSEN1-224ENST00000559361 NBEAP1P0C6P0 100 aa12.46□□□□□ -0.41
PSEN1-224ENST00000559361 PSG9Q00887 426 aa12.46□□□□□ -0.41
PSEN1-224ENST00000559361 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.46□□□□□ -0.41
PSEN1-224ENST00000559361 LINC00322Q6ZN03 302 aaPredicted RBP12.46□□□□□ -0.41
PSEN1-224ENST00000559361 LYPD1Q8N2G4 141 aa12.46□□□□□ -0.41
PSEN1-224ENST00000559361 GBGT1Q8N5D6 347 aa12.46□□□□□ -0.41
PSEN1-224ENST00000559361 LRRC20Q8TCA0 184 aa12.46□□□□□ -0.41
PSEN1-224ENST00000559361 FXYD5Q96DB9 178 aa12.46□□□□□ -0.41
PSEN1-224ENST00000559361 C16orf92Q96LL3 132 aa12.46□□□□□ -0.41
PSEN1-224ENST00000559361 HECTD4Q9Y4D8 3996 aa12.45□□□□□ -0.42
PSEN1-224ENST00000559361 MAP1LC3B2A6NCE7 125 aa12.45□□□□□ -0.42
PSEN1-224ENST00000559361 ARL14EPLP0DKL9 152 aa12.45□□□□□ -0.42
PSEN1-224ENST00000559361 TFPI2P48307 235 aa12.45□□□□□ -0.42
PSEN1-224ENST00000559361 ZNF726P1Q15940 193 aa12.45□□□□□ -0.42
PSEN1-224ENST00000559361 MBD3L1Q8WWY6 194 aa12.45□□□□□ -0.42
PSEN1-224ENST00000559361 MAP1LC3BQ9GZQ8 125 aa12.45□□□□□ -0.42
PSEN1-224ENST00000559361 ZNF331Q9NQX6 463 aaPredicted RBP12.45□□□□□ -0.42
PSEN1-224ENST00000559361 OR11H12B2RN74 326 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 H3BQ15 152 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 IFNA7P01567 189 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 HBE1P02100 147 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 H2AFB1P0C5Y9 115 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 PYYP10082 97 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 CD81P60033 236 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 TEX261Q6UWH6 196 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 ALKAL2Q6UX46 152 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 WFDC3Q8IUB2 231 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 SUN5Q8TC36 379 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 SAT2Q96F10 170 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-224ENST00000559361 ZNF503Q96F45 646 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 C17orf77Q96MU5 243 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 AAMDCQ9H7C9 122 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 ZNF586Q9NXT0 402 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 SELENOKQ9Y6D0 94 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 DNAH10Q8IVF4 4471 aa12.44□□□□□ -0.42
PSEN1-224ENST00000559361 TRAV1-1A0A0B4J248 108 aa12.43□□□□□ -0.42
PSEN1-224ENST00000559361 OR10J4P0C629 311 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms