RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 GP9P14770 177 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 NPPCP23582 126 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 SERF2P84101 59 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 FHL2Q14192 279 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 KPRPQ5T749 579 aaPredicted RBP5.4□□□□□ -1.54
TRAF3-206ENST00000558880 PXDC1Q5TGL8 231 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 LINC00305Q7Z4B0 112 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 SUN5Q8TC36 379 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 SCGB1C1Q8TD33 95 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 DCANP1Q8TF63 244 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 GATAD1Q8WUU5 269 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 TMED6Q8WW62 240 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 MARC2Q969Z3 335 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 SAT2Q96F10 170 aaPredicted RBP5.4□□□□□ -1.54
TRAF3-206ENST00000558880 ELOVL1Q9BW60 279 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 RABAC1Q9UI14 185 aa5.4□□□□□ -1.54
TRAF3-206ENST00000558880 BORCS7-ASMTA0A0B4J1R7 106 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 NDUFB4O95168 129 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 SNRPCP09234 159 aaKnown RBP5.39□□□□□ -1.55
TRAF3-206ENST00000558880 STAG3L2P0CL84 134 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 STAG3L3P0CL85 134 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 TPT1P13693 172 aaKnown RBP5.39□□□□□ -1.55
TRAF3-206ENST00000558880 M6PRP20645 277 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 FAM74A1Q5RGS3 127 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 C1orf194Q5T5A4 169 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 FAM78BQ5VT40 261 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 C10orf113Q5VZT2 155 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 RAB24Q969Q5 203 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 PPP1R14BQ96C90 147 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 FXYD5Q96DB9 178 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 GNPNAT1Q96EK6 184 aaPredicted RBP5.39□□□□□ -1.55
TRAF3-206ENST00000558880 METTL26Q96S19 204 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 ZNF586Q9NXT0 402 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 PEMTQ9UBM1 199 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 FUT9Q9Y231 359 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 HIGD1AQ9Y241 93 aa5.39□□□□□ -1.55
TRAF3-206ENST00000558880 A0A087X0K7 114 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 C17orf112F2Z3M2 114 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 H3BTX0 84 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 SLC17A3O00476 420 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 TSPAN4O14817 238 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 HMGB3O15347 200 aaKnown RBP5.38□□□□□ -1.55
TRAF3-206ENST00000558880 COX7A2P2O60397 106 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 SAP30O75446 220 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 FABP1P07148 127 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 PYYP10082 97 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 HLA-DMBP28068 263 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 SULT1A2P50226 295 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 CCL20P78556 96 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 RAB31Q13636 194 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 TMEM41BQ5BJD5 291 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 C9orf66Q5T8R8 295 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 FAM122CQ6P4D5 195 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 ALKAL2Q6UX46 152 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 Q6ZRG5 221 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 TCF24Q7RTU0 167 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 OR10G4Q8NGN3 311 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 OR10G9Q8NGN4 311 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 OR10G7Q8NGN6 311 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 OR1L4Q8NGR5 311 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 MBD3L1Q8WWY6 194 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 TMEM14CQ9P0S9 112 aa5.38□□□□□ -1.55
TRAF3-206ENST00000558880 EPPK1P58107 5090 aaKnown RBP5.37□□□□□ -1.55
TRAF3-206ENST00000558880 K7EQG2 157 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 CD7P09564 240 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 INSL3P51460 131 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 DEFB1P60022 68 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 ACOT6Q3I5F7 207 aaPredicted RBP5.37□□□□□ -1.55
TRAF3-206ENST00000558880 ODF3L2Q3SX64 289 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 TEX261Q6UWH6 196 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 SIGLEC15Q6ZMC9 328 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 ZNF709Q8N972 641 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 LYPD6BQ8NI32 183 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 PHYHIPLQ96FC7 376 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 PFDN5Q99471 154 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 MRPL32Q9BYC8 188 aaKnown RBP5.37□□□□□ -1.55
TRAF3-206ENST00000558880 MS4A6AQ9H2W1 248 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 SLC25A22Q9H936 323 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 BIRC6Q9NR09 4857 aa5.37□□□□□ -1.55
TRAF3-206ENST00000558880 TRBV19A0A075B6N1 114 aa5.36□□□□□ -1.55
TRAF3-206ENST00000558880 TRAV25A0A0B4J276 109 aa5.36□□□□□ -1.55
TRAF3-206ENST00000558880 A0A1W2PS18 150 aa5.36□□□□□ -1.55
TRAF3-206ENST00000558880 B5MCH6 92 aa5.36□□□□□ -1.55
TRAF3-206ENST00000558880 SCGB2A1O75556 95 aa5.36□□□□□ -1.55
TRAF3-206ENST00000558880 OR10J4P0C629 311 aa5.36□□□□□ -1.55
TRAF3-206ENST00000558880 PRB4P10163 310 aaPredicted RBP5.36□□□□□ -1.55
TRAF3-206ENST00000558880 CDC34P49427 236 aaPredicted RBP5.36□□□□□ -1.55
TRAF3-206ENST00000558880 GBGT1Q8N5D6 347 aa5.36□□□□□ -1.55
TRAF3-206ENST00000558880 ZNF680Q8NEM1 530 aa5.36□□□□□ -1.55
TRAF3-206ENST00000558880 OR2K2Q8NGT1 345 aa5.36□□□□□ -1.55
TRAF3-206ENST00000558880 PCNPQ8WW12 178 aaKnown RBP5.36□□□□□ -1.55
TRAF3-206ENST00000558880 MCRIP2Q9BUT9 160 aaKnown RBP5.36□□□□□ -1.55
TRAF3-206ENST00000558880 WFDC10AQ9H1F0 79 aa5.36□□□□□ -1.55
TRAF3-206ENST00000558880 HRH4Q9H3N8 390 aa5.36□□□□□ -1.55
TRAF3-206ENST00000558880 KCNIP2Q9NS61 270 aa5.36□□□□□ -1.55
TRAF3-206ENST00000558880 IGKV3-7A0A075B6H7 116 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 TRAV2A0A0B4J234 112 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 TRAV1-1A0A0B4J248 108 aa5.35□□□□□ -1.55
TRAF3-206ENST00000558880 CTXND1A0A1B0GTU2 59 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms