RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 A0A1B0GV72 72 aa1.34□□□□□ -2.19
CASC4-206ENST00000558847 CXCL8P10145 99 aa1.34□□□□□ -2.19
CASC4-206ENST00000558847 TMEM78Q5T7P6 136 aa1.34□□□□□ -2.19
CASC4-206ENST00000558847 OR10AG1Q8NH19 301 aa1.34□□□□□ -2.19
CASC4-206ENST00000558847 POP5Q969H6 163 aaKnown RBP1.34□□□□□ -2.19
CASC4-206ENST00000558847 LINC00052Q96N35 136 aa1.34□□□□□ -2.19
CASC4-206ENST00000558847 MCEEQ96PE7 176 aa1.34□□□□□ -2.19
CASC4-206ENST00000558847 CACNA1BQ00975 2339 aa1.34□□□□□ -2.2
CASC4-206ENST00000558847 CD109Q6YHK3 1445 aa1.33□□□□□ -2.2
CASC4-206ENST00000558847 TECTAO75443 2155 aa1.33□□□□□ -2.2
CASC4-206ENST00000558847 E7EQ34 232 aa1.33□□□□□ -2.2
CASC4-206ENST00000558847 F8W1H4 67 aa1.33□□□□□ -2.2
CASC4-206ENST00000558847 FAM107AO95990 144 aa1.33□□□□□ -2.2
CASC4-206ENST00000558847 TFAMQ00059 246 aaKnown RBP1.33□□□□□ -2.2
CASC4-206ENST00000558847 C1orf134Q5TEV5 83 aa1.33□□□□□ -2.2
CASC4-206ENST00000558847 ARPINQ7Z6K5 226 aa1.33□□□□□ -2.2
CASC4-206ENST00000558847 ANGPTL5Q86XS5 388 aa1.33□□□□□ -2.2
CASC4-206ENST00000558847 OR5AS1Q8N127 324 aa1.33□□□□□ -2.2
CASC4-206ENST00000558847 LRRC18Q8N456 261 aa1.33□□□□□ -2.2
CASC4-206ENST00000558847 TCEAL2Q9H3H9 227 aaPredicted RBP1.33□□□□□ -2.2
CASC4-206ENST00000558847 TAS2R7Q9NYW3 318 aa1.33□□□□□ -2.2
CASC4-206ENST00000558847 UBR2Q8IWV8 1755 aa1.33□□□□□ -2.2
CASC4-206ENST00000558847 MYH7BA7E2Y1 1941 aa1.32□□□□□ -2.2
CASC4-206ENST00000558847 POLEQ07864 2286 aa1.32□□□□□ -2.2
CASC4-206ENST00000558847 hDV103S1A0JD37 113 aa1.32□□□□□ -2.2
CASC4-206ENST00000558847 H3BRM9 83 aa1.32□□□□□ -2.2
CASC4-206ENST00000558847 CCL25O15444 150 aa1.32□□□□□ -2.2
CASC4-206ENST00000558847 COX7CP15954 63 aa1.32□□□□□ -2.2
CASC4-206ENST00000558847 ZNF25P17030 456 aaPredicted RBP1.32□□□□□ -2.2
CASC4-206ENST00000558847 CIRBPQ14011 172 aaKnown RBP1.32□□□□□ -2.2
CASC4-206ENST00000558847 MSMO1Q15800 293 aa1.32□□□□□ -2.2
CASC4-206ENST00000558847 LINC00322Q6ZN03 302 aaPredicted RBP1.32□□□□□ -2.2
CASC4-206ENST00000558847 PRR15Q8IV56 129 aa1.32□□□□□ -2.2
CASC4-206ENST00000558847 FAM216BQ8N7L0 139 aa1.32□□□□□ -2.2
CASC4-206ENST00000558847 BORCS8Q96FH0 119 aa1.32□□□□□ -2.2
CASC4-206ENST00000558847 SCN8AQ9UQD0 1980 aa1.32□□□□□ -2.2
CASC4-206ENST00000558847 EXPH5Q8NEV8 1989 aa1.31□□□□□ -2.2
CASC4-206ENST00000558847 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.31□□□□□ -2.2
CASC4-206ENST00000558847 KPNA4O00629 521 aaPredicted RBP1.31□□□□□ -2.2
CASC4-206ENST00000558847 DNAL4O96015 105 aa1.31□□□□□ -2.2
CASC4-206ENST00000558847 IGLV1-51P01701 117 aa1.31□□□□□ -2.2
CASC4-206ENST00000558847 CD2P06729 351 aa1.31□□□□□ -2.2
CASC4-206ENST00000558847 NDUFA6P56556 154 aa1.31□□□□□ -2.2
CASC4-206ENST00000558847 MRPS36P82909 103 aaKnown RBP1.31□□□□□ -2.2
CASC4-206ENST00000558847 KRTAP26-1Q6PEX3 210 aa1.31□□□□□ -2.2
CASC4-206ENST00000558847 SMIM15Q7Z3B0 74 aa1.31□□□□□ -2.2
CASC4-206ENST00000558847 SMPXQ9UHP9 88 aa1.31□□□□□ -2.2
CASC4-206ENST00000558847 TNFSF18Q9UNG2 199 aa1.31□□□□□ -2.2
CASC4-206ENST00000558847 C22orf24Q9Y442 160 aa1.31□□□□□ -2.2
CASC4-206ENST00000558847 FLG2Q5D862 2391 aaPredicted RBP1.31□□□□□ -2.2
CASC4-206ENST00000558847 NISCHQ9Y2I1 1504 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 MYH10P35580 1976 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 EML6Q6ZMW3 1958 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 DOCK4Q8N1I0 1966 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 ZCCHC11Q5TAX3 1644 aaKnown RBP1.3□□□□□ -2.2
CASC4-206ENST00000558847 ODAMA1E959 279 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 PGRMC1O00264 195 aaKnown RBP1.3□□□□□ -2.2
CASC4-206ENST00000558847 IFNA21P01568 189 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 BCL2P10415 239 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 PSG9Q00887 426 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 HAGHLQ6PII5 290 aaPredicted RBP1.3□□□□□ -2.2
CASC4-206ENST00000558847 GKN2Q86XP6 184 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 PLPP5Q8NEB5 264 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 OR4B1Q8NGF8 309 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 DDA1Q9BW61 102 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 NAT8BQ9UHF3 227 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 HSPB8Q9UJY1 196 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 RNF11Q9Y3C5 154 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 RTL9Q8NET4 1388 aa1.3□□□□□ -2.2
CASC4-206ENST00000558847 COL6A6A6NMZ7 2263 aa1.29□□□□□ -2.2
CASC4-206ENST00000558847 TRPM1Q7Z4N2 1603 aa1.29□□□□□ -2.2
CASC4-206ENST00000558847 NUP98P52948 1817 aa1.29□□□□□ -2.2
CASC4-206ENST00000558847 TNRC6BQ9UPQ9 1833 aaKnown RBP1.29□□□□□ -2.2
CASC4-206ENST00000558847 TRDV1A0A1B0GX56 115 aa1.29□□□□□ -2.2
CASC4-206ENST00000558847 B4DSR2 109 aa1.29□□□□□ -2.2
CASC4-206ENST00000558847 K7ERJ3 54 aa1.29□□□□□ -2.2
CASC4-206ENST00000558847 KRTAP10-4P60372 401 aaPredicted RBP1.29□□□□□ -2.2
CASC4-206ENST00000558847 TOMM20LQ6UXN7 152 aa1.29□□□□□ -2.2
CASC4-206ENST00000558847 GGACTQ9BVM4 153 aa1.29□□□□□ -2.2
CASC4-206ENST00000558847 TMEM138Q9NPI0 162 aa1.29□□□□□ -2.2
CASC4-206ENST00000558847 ASB4Q9Y574 426 aa1.29□□□□□ -2.2
CASC4-206ENST00000558847 KMT2BQ9UMN6 2715 aaPredicted RBP1.28□□□□□ -2.2
CASC4-206ENST00000558847 A0A1W2PRE2 83 aa1.28□□□□□ -2.2
CASC4-206ENST00000558847 EIF3IQ13347 325 aaKnown RBP1.28□□□□□ -2.2
CASC4-206ENST00000558847 AMELYQ99218 206 aa1.28□□□□□ -2.2
CASC4-206ENST00000558847 OTORQ9NRC9 128 aa1.28□□□□□ -2.2
CASC4-206ENST00000558847 RFX7Q2KHR2 1363 aa1.28□□□□□ -2.2
CASC4-206ENST00000558847 TRAPPC8Q9Y2L5 1435 aa1.28□□□□□ -2.2
CASC4-206ENST00000558847 LAMB4A4D0S4 1761 aa1.28□□□□□ -2.2
CASC4-206ENST00000558847 SCN3AQ9NY46 2000 aa1.28□□□□□ -2.2
CASC4-206ENST00000558847 A0A096LPI6 279 aa1.27□□□□□ -2.21
CASC4-206ENST00000558847 MT-ND6P03923 174 aa1.27□□□□□ -2.21
CASC4-206ENST00000558847 Q8TAT8 98 aa1.27□□□□□ -2.21
CASC4-206ENST00000558847 LRTM1Q9HBL6 345 aa1.27□□□□□ -2.21
CASC4-206ENST00000558847 TPRKBQ9Y3C4 175 aa1.27□□□□□ -2.21
CASC4-206ENST00000558847 CEP192Q8TEP8 1941 aa1.27□□□□□ -2.21
CASC4-206ENST00000558847 PIK3C2AO00443 1686 aa1.26□□□□□ -2.21
CASC4-206ENST00000558847 ADGBQ8N7X0 1667 aa1.26□□□□□ -2.21
CASC4-206ENST00000558847 TECPR2O15040 1411 aa1.26□□□□□ -2.21
CASC4-206ENST00000558847 KIAA1107Q9UPP5 1409 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms