RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 RNF183Q96D59 192 aa12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 HIST1H4GQ99525 98 aa12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 TNCP24821 2201 aa12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 NCBP2LA6PVI3 153 aaKnown RBP12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 HOXA3O43365 443 aaPredicted RBP12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 IL4P05112 153 aa12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 IGHV1-2P23083 117 aa12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 ZC2HC1BQ5TFG8 222 aa12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 LYZL1Q6UWQ5 148 aa12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 AMN1Q8IY45 258 aa12.84□□□□□ -0.35
HMBOX1-212ENST00000558662 TRBV20-1A0A075B6N2 111 aa12.83□□□□□ -0.36
HMBOX1-212ENST00000558662 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.83□□□□□ -0.36
HMBOX1-212ENST00000558662 IGHG4P01861 327 aa12.83□□□□□ -0.36
HMBOX1-212ENST00000558662 VMA21Q3ZAQ7 101 aa12.83□□□□□ -0.36
HMBOX1-212ENST00000558662 SPINK14Q6IE38 97 aa12.83□□□□□ -0.36
HMBOX1-212ENST00000558662 TEN1Q86WV5 123 aa12.83□□□□□ -0.36
HMBOX1-212ENST00000558662 SAP25Q8TEE9 199 aa12.83□□□□□ -0.36
HMBOX1-212ENST00000558662 TRBV19A0A075B6N1 114 aa12.82□□□□□ -0.36
HMBOX1-212ENST00000558662 NPYP01303 97 aa12.82□□□□□ -0.36
HMBOX1-212ENST00000558662 IGHV3-13P01766 116 aa12.82□□□□□ -0.36
HMBOX1-212ENST00000558662 IGFBP4P22692 258 aa12.82□□□□□ -0.36
HMBOX1-212ENST00000558662 PDE6HQ13956 83 aa12.82□□□□□ -0.36
HMBOX1-212ENST00000558662 Q6ZT83 130 aa12.82□□□□□ -0.36
HMBOX1-212ENST00000558662 TEX29Q8N6K0 151 aa12.82□□□□□ -0.36
HMBOX1-212ENST00000558662 FAM169BQ8N8A8 192 aa12.82□□□□□ -0.36
HMBOX1-212ENST00000558662 C8orf31Q8N9H6 132 aa12.82□□□□□ -0.36
HMBOX1-212ENST00000558662 ZNRF1Q8ND25 227 aa12.82□□□□□ -0.36
HMBOX1-212ENST00000558662 LEAP2Q969E1 77 aa12.82□□□□□ -0.36
HMBOX1-212ENST00000558662 PI4KAP42356 2102 aa12.82□□□□□ -0.36
HMBOX1-212ENST00000558662 TRAV8-1A0A0A6YYK1 113 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 CGB1A6NKQ9 187 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 NTN3O00634 580 aaPredicted RBP12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 CEACAM4O75871 244 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 MT-ATP8P03928 68 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 ASIPP42127 132 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 MEOX1P50221 254 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 INSL3P51460 131 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 SBSPONQ8IVN8 264 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 CNFNQ9BYD5 112 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 PCNX2A6NKB5 2137 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 C5orf42Q9H799 3197 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 SRD5A1P18405 259 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 TNFRSF1AP19438 455 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 LEPP41159 167 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 XGP55808 180 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 Q6Q795 121 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 RPEQ96AT9 228 aa12.81□□□□□ -0.36
HMBOX1-212ENST00000558662 MOGAT3Q86VF5 341 aa12.8□□□□□ -0.36
HMBOX1-212ENST00000558662 NGBQ9NPG2 151 aa12.8□□□□□ -0.36
HMBOX1-212ENST00000558662 DKK4Q9UBT3 224 aa12.8□□□□□ -0.36
HMBOX1-212ENST00000558662 TMEM8BA6NDV4 472 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 C16orf97H3BN30 126 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 TNFRSF13BO14836 293 aaPredicted RBP12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 IGLV1-44P01699 117 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 ZNF688P0C7X2 276 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 GATA4P43694 442 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 AMTNQ6UX39 209 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 GTSCR1Q86UQ5 136 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 Q8N8P6 123 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 FOXC2Q99958 501 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 MRPL36Q9P0J6 103 aaKnown RBP12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 TRAV12-1A0A0B4J245 112 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 TMEM213A2RRL7 107 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 PRRG2O14669 202 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 CRIP1P50238 77 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 MYOZ3Q8TDC0 251 aa12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 MRPL20Q9BYC9 149 aaKnown RBP12.79□□□□□ -0.36
HMBOX1-212ENST00000558662 A0A087WX48 190 aa12.78□□□□□ -0.36
HMBOX1-212ENST00000558662 MORN3Q6PF18 240 aaPredicted RBP12.78□□□□□ -0.36
HMBOX1-212ENST00000558662 SIGLEC15Q6ZMC9 328 aa12.78□□□□□ -0.36
HMBOX1-212ENST00000558662 LINC00311Q8N616 119 aa12.78□□□□□ -0.36
HMBOX1-212ENST00000558662 OR11H6Q8NGC7 330 aa12.78□□□□□ -0.36
HMBOX1-212ENST00000558662 TPPP3Q9BW30 176 aa12.78□□□□□ -0.36
HMBOX1-212ENST00000558662 DOCK10Q96BY6 2186 aa12.78□□□□□ -0.36
HMBOX1-212ENST00000558662 SZT2Q5T011 3432 aa12.77□□□□□ -0.36
HMBOX1-212ENST00000558662 TRBV7-9A0A0J9YWB2 115 aa12.77□□□□□ -0.36
HMBOX1-212ENST00000558662 MYMXA0A1B0GTQ4 84 aa12.77□□□□□ -0.36
HMBOX1-212ENST00000558662 UBE2D3P61077 147 aa12.77□□□□□ -0.36
HMBOX1-212ENST00000558662 UBE2D2P62837 147 aa12.77□□□□□ -0.36
HMBOX1-212ENST00000558662 EXOC3-AS1Q8N2X6 119 aa12.77□□□□□ -0.36
HMBOX1-212ENST00000558662 CITED1Q99966 193 aa12.77□□□□□ -0.36
HMBOX1-212ENST00000558662 SHANK2-AS3Q9BTD1 123 aa12.77□□□□□ -0.36
HMBOX1-212ENST00000558662 SS18L2Q9UHA2 77 aa12.77□□□□□ -0.36
HMBOX1-212ENST00000558662 UNC80Q8N2C7 3258 aa12.77□□□□□ -0.36
HMBOX1-212ENST00000558662 A0A1W2PPI3 338 aa12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 RHODO00212 210 aa12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 IGLV2-23P01705 113 aa12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 IGLC6P0CF74 106 aa12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 CCL4P13236 92 aa12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 SMCPP49901 116 aaPredicted RBP12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 HOXA4Q00056 320 aaPredicted RBP12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 IGHV3OR15-7A0A075B7D8 119 aa12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 E7EUB6 86 aa12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 CECR9P0C854 216 aa12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 UTF1Q5T230 341 aa12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 C6orf15Q6UXA7 325 aaPredicted RBP12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 NFE4Q86UQ8 179 aa12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 AAMDCQ9H7C9 122 aa12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 TRIOBPQ9H2D6 2365 aa12.76□□□□□ -0.37
HMBOX1-212ENST00000558662 CACNA1EQ15878 2313 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms