RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ZNF785A8K8V0 405 aa11.26□□□□□ -0.61
VPS18-202ENST00000558474 H3BQ15 152 aa11.26□□□□□ -0.61
VPS18-202ENST00000558474 PEA15Q15121 130 aa11.26□□□□□ -0.61
VPS18-202ENST00000558474 ADAMTSL5Q6ZMM2 481 aa11.26□□□□□ -0.61
VPS18-202ENST00000558474 TCF24Q7RTU0 167 aa11.26□□□□□ -0.61
VPS18-202ENST00000558474 ARL6IP6Q8N6S5 226 aa11.26□□□□□ -0.61
VPS18-202ENST00000558474 MCRIP2Q9BUT9 160 aaKnown RBP11.26□□□□□ -0.61
VPS18-202ENST00000558474 LOC102723971A0A1B0GUV8 181 aa11.25□□□□□ -0.61
VPS18-202ENST00000558474 PAGE4O60829 102 aa11.25□□□□□ -0.61
VPS18-202ENST00000558474 INSL3P51460 131 aa11.25□□□□□ -0.61
VPS18-202ENST00000558474 PAFAH1B2P68402 229 aa11.25□□□□□ -0.61
VPS18-202ENST00000558474 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.25□□□□□ -0.61
VPS18-202ENST00000558474 DYNLRB2Q8TF09 96 aa11.25□□□□□ -0.61
VPS18-202ENST00000558474 EIF5A2Q9GZV4 153 aaKnown RBP11.25□□□□□ -0.61
VPS18-202ENST00000558474 NRN1Q9NPD7 142 aa11.25□□□□□ -0.61
VPS18-202ENST00000558474 MLXQ9UH92 298 aa11.25□□□□□ -0.61
VPS18-202ENST00000558474 SETD2Q9BYW2 2564 aaPredicted RBP11.25□□□□□ -0.61
VPS18-202ENST00000558474 FBN1P35555 2871 aaKnown RBP11.25□□□□□ -0.61
VPS18-202ENST00000558474 NDUFB4O95168 129 aa11.24□□□□□ -0.61
VPS18-202ENST00000558474 EDN2P20800 178 aa11.24□□□□□ -0.61
VPS18-202ENST00000558474 MEF2BQ02080 365 aaPredicted RBP11.24□□□□□ -0.61
VPS18-202ENST00000558474 DEFB114Q30KQ6 69 aa11.24□□□□□ -0.61
VPS18-202ENST00000558474 COMMD7Q86VX2 200 aa11.24□□□□□ -0.61
VPS18-202ENST00000558474 WFDC9Q8NEX5 89 aa11.24□□□□□ -0.61
VPS18-202ENST00000558474 BLNKQ8WV28 456 aa11.24□□□□□ -0.61
VPS18-202ENST00000558474 AAMDCQ9H7C9 122 aa11.24□□□□□ -0.61
VPS18-202ENST00000558474 OTORQ9NRC9 128 aa11.24□□□□□ -0.61
VPS18-202ENST00000558474 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
VPS18-202ENST00000558474 TSPAN4O14817 238 aa11.23□□□□□ -0.61
VPS18-202ENST00000558474 PDE6DO43924 150 aa11.23□□□□□ -0.61
VPS18-202ENST00000558474 ICAM4Q14773 271 aa11.23□□□□□ -0.61
VPS18-202ENST00000558474 HAGHQ16775 308 aa11.23□□□□□ -0.61
VPS18-202ENST00000558474 TOR2AQ5JU69 321 aa11.23□□□□□ -0.61
VPS18-202ENST00000558474 CCDC28AQ8IWP9 274 aa11.23□□□□□ -0.61
VPS18-202ENST00000558474 MRPL53Q96EL3 112 aaKnown RBP11.23□□□□□ -0.61
VPS18-202ENST00000558474 C17orf77Q96MU5 243 aa11.23□□□□□ -0.61
VPS18-202ENST00000558474 Q9H3A6 140 aa11.23□□□□□ -0.61
VPS18-202ENST00000558474 ZNF331Q9NQX6 463 aaPredicted RBP11.23□□□□□ -0.61
VPS18-202ENST00000558474 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
VPS18-202ENST00000558474 ATRQ13535 2644 aa11.23□□□□□ -0.61
VPS18-202ENST00000558474 C11orf94C9JXX5 98 aa11.22□□□□□ -0.61
VPS18-202ENST00000558474 F6UZH7 168 aa11.22□□□□□ -0.61
VPS18-202ENST00000558474 TMEM250H0YL14 139 aa11.22□□□□□ -0.61
VPS18-202ENST00000558474 ISLRO14498 428 aa11.22□□□□□ -0.61
VPS18-202ENST00000558474 UBE2G2P60604 165 aa11.22□□□□□ -0.61
VPS18-202ENST00000558474 RANP62826 216 aaKnown RBP11.22□□□□□ -0.61
VPS18-202ENST00000558474 RPL11P62913 178 aaKnown RBP11.22□□□□□ -0.61
VPS18-202ENST00000558474 CST9LP1Q5W188 147 aa11.22□□□□□ -0.61
VPS18-202ENST00000558474 RBPMS2Q6ZRY4 209 aaKnown RBP11.22□□□□□ -0.61
VPS18-202ENST00000558474 RXFP4Q8TDU9 374 aa11.22□□□□□ -0.61
VPS18-202ENST00000558474 SPAG8Q99932 426 aaPredicted RBP11.22□□□□□ -0.61
VPS18-202ENST00000558474 PGPA6NDG6 321 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 SOCS3O14543 225 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 SAP30O75446 220 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 IGLV1-51P01701 117 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 ID1P41134 155 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 SUMO1P63165 101 aaKnown RBP11.21□□□□□ -0.61
VPS18-202ENST00000558474 C9orf66Q5T8R8 295 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 C5orf17Q8NAS9 161 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 DCANP1Q8TF63 244 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 HIST1H2BAQ96A08 127 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 RPUSD4Q96CM3 377 aaKnown RBP11.21□□□□□ -0.61
VPS18-202ENST00000558474 C16orf92Q96LL3 132 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 RARRES2Q99969 163 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 GPR61Q9BZJ8 451 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 MS4A6AQ9H2W1 248 aa11.21□□□□□ -0.61
VPS18-202ENST00000558474 SERTM2A0A1B0GWG4 89 aa11.2□□□□□ -0.62
VPS18-202ENST00000558474 GGTLC3B5MD39 225 aa11.2□□□□□ -0.62
VPS18-202ENST00000558474 K7EQG2 157 aa11.2□□□□□ -0.62
VPS18-202ENST00000558474 DNASE2O00115 360 aaPredicted RBP11.2□□□□□ -0.62
VPS18-202ENST00000558474 SLC17A3O00476 420 aa11.2□□□□□ -0.62
VPS18-202ENST00000558474 CD33P20138 364 aa11.2□□□□□ -0.62
VPS18-202ENST00000558474 CD81P60033 236 aa11.2□□□□□ -0.62
VPS18-202ENST00000558474 KRTAP21-3Q3LHN1 58 aa11.2□□□□□ -0.62
VPS18-202ENST00000558474 TENM1Q9UKZ4 2725 aa11.2□□□□□ -0.62
VPS18-202ENST00000558474 CSN1S1P47710 185 aa11.19□□□□□ -0.62
VPS18-202ENST00000558474 ATP5G3P48201 142 aa11.19□□□□□ -0.62
VPS18-202ENST00000558474 CD300EQ496F6 205 aaPredicted RBP11.19□□□□□ -0.62
VPS18-202ENST00000558474 LCN12Q6JVE5 192 aa11.19□□□□□ -0.62
VPS18-202ENST00000558474 TMEM61Q8N0U2 210 aa11.19□□□□□ -0.62
VPS18-202ENST00000558474 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
VPS18-202ENST00000558474 C11orf52Q96A22 123 aa11.19□□□□□ -0.62
VPS18-202ENST00000558474 SLC35B3Q9H1N7 401 aa11.19□□□□□ -0.62
VPS18-202ENST00000558474 EPDR1Q9UM22 224 aa11.19□□□□□ -0.62
VPS18-202ENST00000558474 TRAV8-2A0A0B4J237 113 aa11.18□□□□□ -0.62
VPS18-202ENST00000558474 OR4C46A6NHA9 309 aa11.18□□□□□ -0.62
VPS18-202ENST00000558474 FBLL1A6NHQ2 334 aaKnown RBP11.18□□□□□ -0.62
VPS18-202ENST00000558474 H3BTX0 84 aa11.18□□□□□ -0.62
VPS18-202ENST00000558474 WIPF1O43516 503 aa11.18□□□□□ -0.62
VPS18-202ENST00000558474 SLC25A5P05141 298 aaKnown RBP11.18□□□□□ -0.62
VPS18-202ENST00000558474 SRP19P09132 144 aaKnown RBP11.18□□□□□ -0.62
VPS18-202ENST00000558474 SNRPCP09234 159 aaKnown RBP11.18□□□□□ -0.62
VPS18-202ENST00000558474 CMC4P56277 68 aaPredicted RBP11.18□□□□□ -0.62
VPS18-202ENST00000558474 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
VPS18-202ENST00000558474 PSG3Q16557 428 aa11.18□□□□□ -0.62
VPS18-202ENST00000558474 EXOC3-AS1Q8N2X6 119 aa11.18□□□□□ -0.62
VPS18-202ENST00000558474 TREM1Q9NP99 234 aa11.18□□□□□ -0.62
VPS18-202ENST00000558474 K7EQM0 130 aa11.17□□□□□ -0.62
VPS18-202ENST00000558474 S100A9P06702 114 aaKnown RBP11.17□□□□□ -0.62
VPS18-202ENST00000558474 SRSF3P84103 164 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms