RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 UBE2L5PA0A1B0GUS4 154 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 C17orf112F2Z3M2 114 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 IFNA5P01569 189 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 GIG44P09565 113 aaPredicted RBP6.19□□□□□ -1.42
TPM1-213ENST00000558400 MIFP14174 115 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 RPL12P30050 165 aaKnown RBP6.19□□□□□ -1.42
TPM1-213ENST00000558400 PSG9Q00887 426 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 OPCMLQ14982 345 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 LCN15Q6UWW0 184 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 OR4B1Q8NGF8 309 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 SCGB1C1Q8TD33 95 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 SLC50A1Q9BRV3 221 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 MFFQ9GZY8 342 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 HRH4Q9H3N8 390 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 PXMP4Q9Y6I8 212 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 HERC2O95714 4834 aa6.19□□□□□ -1.42
TPM1-213ENST00000558400 A0A0J9YX75 114 aa6.18□□□□□ -1.42
TPM1-213ENST00000558400 SMIM9A6NGZ8 99 aa6.18□□□□□ -1.42
TPM1-213ENST00000558400 ZNF705EA8MWA4 302 aaPredicted RBP6.18□□□□□ -1.42
TPM1-213ENST00000558400 MRPS12O15235 138 aaKnown RBP6.18□□□□□ -1.42
TPM1-213ENST00000558400 AMBPP02760 352 aa6.18□□□□□ -1.42
TPM1-213ENST00000558400 PSG3Q16557 428 aa6.18□□□□□ -1.42
TPM1-213ENST00000558400 FAM78BQ5VT40 261 aa6.18□□□□□ -1.42
TPM1-213ENST00000558400 CSNK1G2-AS1Q8NCQ2 148 aa6.18□□□□□ -1.42
TPM1-213ENST00000558400 ATP5SQ99766 215 aa6.18□□□□□ -1.42
TPM1-213ENST00000558400 NPCDR1Q9BY65 106 aa6.18□□□□□ -1.42
TPM1-213ENST00000558400 WDR61Q9GZS3 305 aaKnown RBP6.18□□□□□ -1.42
TPM1-213ENST00000558400 C11orf68Q9H3H3 251 aaKnown RBP6.18□□□□□ -1.42
TPM1-213ENST00000558400 HSPB11Q9Y547 144 aa6.18□□□□□ -1.42
TPM1-213ENST00000558400 DNAH7Q8WXX0 4024 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 A8MTW9 85 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 ZNF253O75346 499 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 CXCL3P19876 107 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 CLINT1Q14677 625 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 GDF5OSQ5U4N7 250 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 ZFAND6Q6FIF0 208 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 Q6ZNX1 250 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 ZNF738Q8NE65 137 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 C17orf77Q96MU5 243 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 NEU1Q99519 415 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 PARD6GQ9BYG4 376 aaPredicted RBP6.17□□□□□ -1.42
TPM1-213ENST00000558400 ZNF331Q9NQX6 463 aaPredicted RBP6.17□□□□□ -1.42
TPM1-213ENST00000558400 TMEM14CQ9P0S9 112 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 MBD2Q9UBB5 411 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 XCL2Q9UBD3 114 aa6.17□□□□□ -1.42
TPM1-213ENST00000558400 AGRNO00468 2067 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 TRAV8-2A0A0B4J237 113 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 TMEM189A5PLL7 270 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 NUPR2A6NF83 97 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 IGKV3-20P01619 116 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 GIPP09681 153 aaPredicted RBP6.16□□□□□ -1.42
TPM1-213ENST00000558400 HIST1H1EP10412 219 aaKnown RBP6.16□□□□□ -1.42
TPM1-213ENST00000558400 C4BPBP20851 252 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 PDE6HQ13956 83 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 OXA1LQ15070 435 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 FCN2Q15485 313 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 C11orf45Q8TAV5 145 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 SAT2Q96F10 170 aaPredicted RBP6.16□□□□□ -1.42
TPM1-213ENST00000558400 C20orf173Q96LM9 149 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 MRPL32Q9BYC8 188 aaKnown RBP6.16□□□□□ -1.42
TPM1-213ENST00000558400 PPP1R14DQ9NXH3 145 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 KLK5Q9Y337 293 aaPredicted RBP6.16□□□□□ -1.42
TPM1-213ENST00000558400 GOLT1BQ9Y3E0 138 aa6.16□□□□□ -1.42
TPM1-213ENST00000558400 CXorf65A6NEN9 183 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 F6UB75 175 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 IGLC2P0DOY2 106 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 CNN1P51911 297 aaKnown RBP6.15□□□□□ -1.42
TPM1-213ENST00000558400 ZNF266Q14584 549 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 IGFL4Q6B9Z1 124 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 CEMP1Q6PRD7 247 aaPredicted RBP6.15□□□□□ -1.42
TPM1-213ENST00000558400 ZNF705AQ6ZN79 300 aaPredicted RBP6.15□□□□□ -1.42
TPM1-213ENST00000558400 RNF182Q8N6D2 247 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 Q8NAQ8 132 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 INO80EQ8NBZ0 244 aaPredicted RBP6.15□□□□□ -1.42
TPM1-213ENST00000558400 OR11H7Q8NGC8 314 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 OR8A1Q8NGG7 326 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 RPUSD4Q96CM3 377 aaKnown RBP6.15□□□□□ -1.42
TPM1-213ENST00000558400 IGF2BP2-AS1Q96M15 143 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 PRELID1Q9Y255 219 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 TIMM9Q9Y5J7 89 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 X6R8D5 127 aa6.15□□□□□ -1.42
TPM1-213ENST00000558400 TRBV19A0A075B6N1 114 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 TRAV5A0A0B4J249 113 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 IGHV4-28A0A0C4DH34 117 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 ZNF705FA8MVS1 300 aaPredicted RBP6.14□□□□□ -1.43
TPM1-213ENST00000558400 C11orf94C9JXX5 98 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 H3BQ15 152 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 PFDN1O60925 122 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 JTBO76095 146 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 NBEAP1P0C6P0 100 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 ZNF705DP0CH99 300 aaPredicted RBP6.14□□□□□ -1.43
TPM1-213ENST00000558400 ZNF705BP0CI00 300 aaPredicted RBP6.14□□□□□ -1.43
TPM1-213ENST00000558400 TSPOP30536 169 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 TAS2R45P59539 299 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 DEFB1P60022 68 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 RHOBP62745 196 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 MORN5Q5VZ52 161 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 AMTNQ6UX39 209 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 OR10J6PQ8NGY7 276 aa6.14□□□□□ -1.43
TPM1-213ENST00000558400 MRPL53Q96EL3 112 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms