RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 LEMD1Q68G75 181 aa9.41□□□□□ -0.9
TPM1-209ENST00000558072 LCN12Q6JVE5 192 aa9.41□□□□□ -0.9
TPM1-209ENST00000558072 RXFP4Q8TDU9 374 aa9.41□□□□□ -0.9
TPM1-209ENST00000558072 FXYD5Q96DB9 178 aa9.41□□□□□ -0.9
TPM1-209ENST00000558072 VAX2Q9UIW0 290 aa9.41□□□□□ -0.9
TPM1-209ENST00000558072 SELENOKQ9Y6D0 94 aa9.41□□□□□ -0.9
TPM1-209ENST00000558072 TRBV19A0A075B6N1 114 aa9.4□□□□□ -0.9
TPM1-209ENST00000558072 TSPAN4O14817 238 aa9.4□□□□□ -0.9
TPM1-209ENST00000558072 MRPS12O15235 138 aaKnown RBP9.4□□□□□ -0.9
TPM1-209ENST00000558072 APOHP02749 345 aaPredicted RBP9.4□□□□□ -0.9
TPM1-209ENST00000558072 CSN1S1P47710 185 aa9.4□□□□□ -0.9
TPM1-209ENST00000558072 SNRPD3P62318 126 aaKnown RBP9.4□□□□□ -0.9
TPM1-209ENST00000558072 DEFB114Q30KQ6 69 aa9.4□□□□□ -0.9
TPM1-209ENST00000558072 MORN5Q5VZ52 161 aa9.4□□□□□ -0.9
TPM1-209ENST00000558072 FAM90A2PQ658T7 463 aa9.4□□□□□ -0.9
TPM1-209ENST00000558072 SPAG8Q99932 426 aaPredicted RBP9.4□□□□□ -0.9
TPM1-209ENST00000558072 OTORQ9NRC9 128 aa9.4□□□□□ -0.9
TPM1-209ENST00000558072 GNG13Q9P2W3 67 aa9.4□□□□□ -0.9
TPM1-209ENST00000558072 MLXQ9UH92 298 aa9.4□□□□□ -0.9
TPM1-209ENST00000558072 IGHV3OR16-13A0A075B7E8 117 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 IGHV3-49A0A0A0MS15 119 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 IGHV3-74A0A0B4J1X5 117 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 IGHV3-66A0A0C4DH42 116 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 SERTM2A0A1B0GWG4 89 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 RBFOX3A6NFN3 312 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 OR4C46A6NHA9 309 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 K7EQM0 130 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 ISLRO14498 428 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 PDE6DO43924 150 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 OR10J4P0C629 311 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 PYYP10082 97 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 PRR31Q5SQ13 230 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 UQCC3Q6UW78 93 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 SSX7Q7RTT5 188 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 CMTM2Q8TAZ6 248 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 RPUSD4Q96CM3 377 aaKnown RBP9.39□□□□□ -0.91
TPM1-209ENST00000558072 MRPL53Q96EL3 112 aaKnown RBP9.39□□□□□ -0.91
TPM1-209ENST00000558072 C16orf92Q96LL3 132 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 FAM210AQ96ND0 272 aa9.39□□□□□ -0.91
TPM1-209ENST00000558072 EIF5A2Q9GZV4 153 aaKnown RBP9.39□□□□□ -0.91
TPM1-209ENST00000558072 LINC00862A6NCI5 91 aa9.38□□□□□ -0.91
TPM1-209ENST00000558072 FBLL1A6NHQ2 334 aaKnown RBP9.38□□□□□ -0.91
TPM1-209ENST00000558072 BCL2P10415 239 aa9.38□□□□□ -0.91
TPM1-209ENST00000558072 CST9LP1Q5W188 147 aa9.38□□□□□ -0.91
TPM1-209ENST00000558072 BLNKQ8WV28 456 aa9.38□□□□□ -0.91
TPM1-209ENST00000558072 ZNF503Q96F45 646 aa9.38□□□□□ -0.91
TPM1-209ENST00000558072 ZNF586Q9NXT0 402 aa9.38□□□□□ -0.91
TPM1-209ENST00000558072 A0A1B0GV50 99 aa9.37□□□□□ -0.91
TPM1-209ENST00000558072 FAM74A7A6NL05 159 aa9.37□□□□□ -0.91
TPM1-209ENST00000558072 PAGE4O60829 102 aa9.37□□□□□ -0.91
TPM1-209ENST00000558072 IGLV1-51P01701 117 aa9.37□□□□□ -0.91
TPM1-209ENST00000558072 RANP62826 216 aaKnown RBP9.37□□□□□ -0.91
TPM1-209ENST00000558072 MEF2BQ02080 365 aaPredicted RBP9.37□□□□□ -0.91
TPM1-209ENST00000558072 ZNF506Q5JVG8 444 aa9.37□□□□□ -0.91
TPM1-209ENST00000558072 C5orf17Q8NAS9 161 aa9.37□□□□□ -0.91
TPM1-209ENST00000558072 HIST1H2BAQ96A08 127 aa9.37□□□□□ -0.91
TPM1-209ENST00000558072 ZNF331Q9NQX6 463 aaPredicted RBP9.37□□□□□ -0.91
TPM1-209ENST00000558072 SMAD5-AS1Q9Y6J3 95 aa9.37□□□□□ -0.91
TPM1-209ENST00000558072 PGPA6NDG6 321 aa9.36□□□□□ -0.91
TPM1-209ENST00000558072 C11orf94C9JXX5 98 aa9.36□□□□□ -0.91
TPM1-209ENST00000558072 H3BQ15 152 aa9.36□□□□□ -0.91
TPM1-209ENST00000558072 S100A9P06702 114 aaKnown RBP9.36□□□□□ -0.91
TPM1-209ENST00000558072 CCL20P78556 96 aa9.36□□□□□ -0.91
TPM1-209ENST00000558072 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.36□□□□□ -0.91
TPM1-209ENST00000558072 EIF4E3Q8N5X7 224 aaKnown RBP9.36□□□□□ -0.91
TPM1-209ENST00000558072 MS4A6AQ9H2W1 248 aa9.36□□□□□ -0.91
TPM1-209ENST00000558072 Q9H3A6 140 aa9.36□□□□□ -0.91
TPM1-209ENST00000558072 TMPRSS5Q9H3S3 457 aa9.36□□□□□ -0.91
TPM1-209ENST00000558072 WNK1Q9H4A3 2382 aa9.35□□□□□ -0.91
TPM1-209ENST00000558072 LOC102723971A0A1B0GUV8 181 aa9.35□□□□□ -0.91
TPM1-209ENST00000558072 TMEM250H0YL14 139 aa9.35□□□□□ -0.91
TPM1-209ENST00000558072 WIPF1O43516 503 aa9.35□□□□□ -0.91
TPM1-209ENST00000558072 UBE2G2P60604 165 aa9.35□□□□□ -0.91
TPM1-209ENST00000558072 SUMO1P63165 101 aaKnown RBP9.35□□□□□ -0.91
TPM1-209ENST00000558072 ANK2Q01484 3957 aa9.35□□□□□ -0.91
TPM1-209ENST00000558072 HAGHQ16775 308 aa9.35□□□□□ -0.91
TPM1-209ENST00000558072 CD300EQ496F6 205 aaPredicted RBP9.35□□□□□ -0.91
TPM1-209ENST00000558072 ADAMTSL5Q6ZMM2 481 aa9.35□□□□□ -0.91
TPM1-209ENST00000558072 TMEM61Q8N0U2 210 aa9.35□□□□□ -0.91
TPM1-209ENST00000558072 FAM110AQ9BQ89 295 aa9.35□□□□□ -0.91
TPM1-209ENST00000558072 STAB1Q9NY15 2570 aa9.34□□□□□ -0.91
TPM1-209ENST00000558072 K7EQG2 157 aa9.34□□□□□ -0.91
TPM1-209ENST00000558072 SLC25A5P05141 298 aaKnown RBP9.34□□□□□ -0.91
TPM1-209ENST00000558072 PSG3Q16557 428 aa9.34□□□□□ -0.91
TPM1-209ENST00000558072 TOR2AQ5JU69 321 aa9.34□□□□□ -0.91
TPM1-209ENST00000558072 DCANP1Q8TF63 244 aa9.34□□□□□ -0.91
TPM1-209ENST00000558072 PCNPQ8WW12 178 aaKnown RBP9.34□□□□□ -0.91
TPM1-209ENST00000558072 COL6A5A8TX70 2615 aa9.34□□□□□ -0.91
TPM1-209ENST00000558072 RBAKDNA6NC62 111 aa9.33□□□□□ -0.92
TPM1-209ENST00000558072 EIF3GO75821 320 aaKnown RBP eCLIP9.33□□□□□ -0.92
TPM1-209ENST00000558072 NDUFB4O95168 129 aa9.33□□□□□ -0.92
TPM1-209ENST00000558072 ICAM4Q14773 271 aa9.33□□□□□ -0.92
TPM1-209ENST00000558072 GUCA2BQ16661 112 aa9.33□□□□□ -0.92
TPM1-209ENST00000558072 FAM74A3Q4VXF1 159 aa9.33□□□□□ -0.92
TPM1-209ENST00000558072 COMMD7Q86VX2 200 aa9.33□□□□□ -0.92
TPM1-209ENST00000558072 ATG101Q9BSB4 218 aa9.33□□□□□ -0.92
TPM1-209ENST00000558072 SLC35B3Q9H1N7 401 aa9.33□□□□□ -0.92
TPM1-209ENST00000558072 TREM1Q9NP99 234 aa9.33□□□□□ -0.92
TPM1-209ENST00000558072 EPDR1Q9UM22 224 aa9.33□□□□□ -0.92
TPM1-209ENST00000558072 DNHD1Q96M86 4753 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms