RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 H3BQ15 152 aa15.84■□□□□ 0.13
CASC4-204ENST00000557945 DEFB131AP59861 70 aa15.84■□□□□ 0.13
CASC4-204ENST00000557945 DEFB121Q5J5C9 76 aa15.84■□□□□ 0.13
CASC4-204ENST00000557945 PSMG4Q5JS54 123 aa15.84■□□□□ 0.13
CASC4-204ENST00000557945 EIF5AL1Q6IS14 154 aaKnown RBP15.84■□□□□ 0.13
CASC4-204ENST00000557945 RAB24Q969Q5 203 aa15.84■□□□□ 0.13
CASC4-204ENST00000557945 LINC00052Q96N35 136 aa15.84■□□□□ 0.13
CASC4-204ENST00000557945 HRH4Q9H3N8 390 aa15.84■□□□□ 0.13
CASC4-204ENST00000557945 C19orf73Q9NVV2 129 aa15.84■□□□□ 0.13
CASC4-204ENST00000557945 ISLRO14498 428 aa15.83■□□□□ 0.12
CASC4-204ENST00000557945 SOCS3O14543 225 aa15.83■□□□□ 0.12
CASC4-204ENST00000557945 OR10J4P0C629 311 aa15.83■□□□□ 0.12
CASC4-204ENST00000557945 HIST1H1EP10412 219 aaKnown RBP15.83■□□□□ 0.12
CASC4-204ENST00000557945 PSMB3P49720 205 aa15.83■□□□□ 0.12
CASC4-204ENST00000557945 APRG1Q8IVJ8 170 aa15.83■□□□□ 0.12
CASC4-204ENST00000557945 MRAPQ8TCY5 172 aa15.83■□□□□ 0.12
CASC4-204ENST00000557945 ZNF586Q9NXT0 402 aa15.83■□□□□ 0.12
CASC4-204ENST00000557945 GUK1Q16774 197 aa15.82■□□□□ 0.12
CASC4-204ENST00000557945 IGFL4Q6B9Z1 124 aa15.82■□□□□ 0.12
CASC4-204ENST00000557945 LCN15Q6UWW0 184 aa15.82■□□□□ 0.12
CASC4-204ENST00000557945 BLNKQ8WV28 456 aa15.82■□□□□ 0.12
CASC4-204ENST00000557945 RNF141Q8WVD5 230 aa15.82■□□□□ 0.12
CASC4-204ENST00000557945 TUBA4BQ9H853 241 aa15.82■□□□□ 0.12
CASC4-204ENST00000557945 PLA2G2EQ9NZK7 142 aa15.82■□□□□ 0.12
CASC4-204ENST00000557945 UMAD1C9J7I0 102 aa15.81■□□□□ 0.12
CASC4-204ENST00000557945 IGHV4-30-4P0DP06 118 aa15.81■□□□□ 0.12
CASC4-204ENST00000557945 UBE2L3P68036 154 aaKnown RBP15.81■□□□□ 0.12
CASC4-204ENST00000557945 ZNF503Q96F45 646 aa15.81■□□□□ 0.12
CASC4-204ENST00000557945 FAM110AQ9BQ89 295 aa15.81■□□□□ 0.12
CASC4-204ENST00000557945 DNAH3Q8TD57 4116 aa15.8■□□□□ 0.12
CASC4-204ENST00000557945 CTXND1A0A1B0GTU2 59 aa15.8■□□□□ 0.12
CASC4-204ENST00000557945 ZNF124Q15973 351 aa15.8■□□□□ 0.12
CASC4-204ENST00000557945 PQLC2Q6ZP29 291 aa15.8■□□□□ 0.12
CASC4-204ENST00000557945 RNF182Q8N6D2 247 aa15.8■□□□□ 0.12
CASC4-204ENST00000557945 FXYD5Q96DB9 178 aa15.8■□□□□ 0.12
CASC4-204ENST00000557945 SLC50A1Q9BRV3 221 aa15.8■□□□□ 0.12
CASC4-204ENST00000557945 SRD5A3Q9H8P0 318 aa15.8■□□□□ 0.12
CASC4-204ENST00000557945 TRBV19A0A075B6N1 114 aa15.79■□□□□ 0.12
CASC4-204ENST00000557945 TRAV8-2A0A0B4J237 113 aa15.79■□□□□ 0.12
CASC4-204ENST00000557945 SLC17A3O00476 420 aa15.79■□□□□ 0.12
CASC4-204ENST00000557945 NBEAP1P0C6P0 100 aa15.79■□□□□ 0.12
CASC4-204ENST00000557945 STAG3L2P0CL84 134 aa15.79■□□□□ 0.12
CASC4-204ENST00000557945 STAG3L3P0CL85 134 aa15.79■□□□□ 0.12
CASC4-204ENST00000557945 ARL14EPLP0DKL9 152 aa15.79■□□□□ 0.12
CASC4-204ENST00000557945 ZNF726P1Q15940 193 aa15.79■□□□□ 0.12
CASC4-204ENST00000557945 SSX7Q7RTT5 188 aa15.79■□□□□ 0.12
CASC4-204ENST00000557945 FAM213BQ8TBF2 198 aa15.79■□□□□ 0.12
CASC4-204ENST00000557945 ZNF331Q9NQX6 463 aaPredicted RBP15.79■□□□□ 0.12
CASC4-204ENST00000557945 HLA-DMBP28068 263 aa15.78■□□□□ 0.12
CASC4-204ENST00000557945 FHITP49789 147 aa15.78■□□□□ 0.12
CASC4-204ENST00000557945 IQCF2Q8IXL9 164 aa15.78■□□□□ 0.12
CASC4-204ENST00000557945 SAT2Q96F10 170 aaPredicted RBP15.78■□□□□ 0.12
CASC4-204ENST00000557945 C20orf173Q96LM9 149 aa15.78■□□□□ 0.12
CASC4-204ENST00000557945 CXorf1O96002 111 aa15.77■□□□□ 0.12
CASC4-204ENST00000557945 CITED4Q96RK1 184 aa15.77■□□□□ 0.12
CASC4-204ENST00000557945 KNCNA6PVL3 124 aa15.76■□□□□ 0.11
CASC4-204ENST00000557945 ZNF253O75346 499 aa15.76■□□□□ 0.11
CASC4-204ENST00000557945 PDE6HQ13956 83 aa15.76■□□□□ 0.11
CASC4-204ENST00000557945 DPPA3Q6W0C5 159 aa15.76■□□□□ 0.11
CASC4-204ENST00000557945 ZNF738Q8NE65 137 aa15.76■□□□□ 0.11
CASC4-204ENST00000557945 MAP1LC3B2A6NCE7 125 aa15.75■□□□□ 0.11
CASC4-204ENST00000557945 NDUFB4O95168 129 aa15.75■□□□□ 0.11
CASC4-204ENST00000557945 GCHFRP30047 84 aa15.75■□□□□ 0.11
CASC4-204ENST00000557945 FGF8P55075 233 aaPredicted RBP15.75■□□□□ 0.11
CASC4-204ENST00000557945 DEFB1P60022 68 aa15.75■□□□□ 0.11
CASC4-204ENST00000557945 PSG9Q00887 426 aa15.75■□□□□ 0.11
CASC4-204ENST00000557945 PSG3Q16557 428 aa15.75■□□□□ 0.11
CASC4-204ENST00000557945 ACTL10Q5JWF8 245 aa15.75■□□□□ 0.11
CASC4-204ENST00000557945 MAP1LC3BQ9GZQ8 125 aa15.75■□□□□ 0.11
CASC4-204ENST00000557945 RAB5CP51148 216 aa15.75■□□□□ 0.11
CASC4-204ENST00000557945 FAM74A1Q5RGS3 127 aa15.75■□□□□ 0.11
CASC4-204ENST00000557945 PHYHIPLQ96FC7 376 aa15.75■□□□□ 0.11
CASC4-204ENST00000557945 AAMDCQ9H7C9 122 aa15.75■□□□□ 0.11
CASC4-204ENST00000557945 FBN3Q75N90 2809 aa15.74■□□□□ 0.11
CASC4-204ENST00000557945 A8MZ25 164 aa15.74■□□□□ 0.11
CASC4-204ENST00000557945 FRMD6-AS1P0C7T7 363 aa15.74■□□□□ 0.11
CASC4-204ENST00000557945 SULT1A2P50226 295 aa15.74■□□□□ 0.11
CASC4-204ENST00000557945 RANP62826 216 aaKnown RBP15.74■□□□□ 0.11
CASC4-204ENST00000557945 ALKAL2Q6UX46 152 aa15.74■□□□□ 0.11
CASC4-204ENST00000557945 STHQ8IWL8 128 aa15.74■□□□□ 0.11
CASC4-204ENST00000557945 EXOC3-AS1Q8N2X6 119 aa15.74■□□□□ 0.11
CASC4-204ENST00000557945 SFT2D1Q8WV19 159 aa15.74■□□□□ 0.11
CASC4-204ENST00000557945 TMEM167BQ9NRX6 74 aa15.74■□□□□ 0.11
CASC4-204ENST00000557945 CLEC5AQ9NY25 188 aa15.74■□□□□ 0.11
CASC4-204ENST00000557945 RBMY1BA6NDE4 496 aaKnown RBP15.73■□□□□ 0.11
CASC4-204ENST00000557945 RBMY1EA6NEQ0 496 aaKnown RBP15.73■□□□□ 0.11
CASC4-204ENST00000557945 F6UB75 175 aa15.73■□□□□ 0.11
CASC4-204ENST00000557945 RBMY1DP0C7P1 496 aaKnown RBP15.73■□□□□ 0.11
CASC4-204ENST00000557945 PRB4P10163 310 aaPredicted RBP15.73■□□□□ 0.11
CASC4-204ENST00000557945 RPL35AP18077 110 aaKnown RBP15.73■□□□□ 0.11
CASC4-204ENST00000557945 EBLN2Q6P2I7 272 aa15.73■□□□□ 0.11
CASC4-204ENST00000557945 LOC102724200A0A096LPH7 203 aaPredicted RBP15.72■□□□□ 0.11
CASC4-204ENST00000557945 A0A1B0GV50 99 aa15.72■□□□□ 0.11
CASC4-204ENST00000557945 ZNF705FA8MVS1 300 aaPredicted RBP15.72■□□□□ 0.11
CASC4-204ENST00000557945 H2AFB1P0C5Y9 115 aa15.72■□□□□ 0.11
CASC4-204ENST00000557945 ICAM4Q14773 271 aa15.72■□□□□ 0.11
CASC4-204ENST00000557945 FOXI2Q6ZQN5 318 aa15.72■□□□□ 0.11
CASC4-204ENST00000557945 RPUSD4Q96CM3 377 aaKnown RBP15.72■□□□□ 0.11
CASC4-204ENST00000557945 TMPRSS5Q9H3S3 457 aa15.72■□□□□ 0.11
CASC4-204ENST00000557945 SAV1Q9H4B6 383 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms