RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 IGHV3-74A0A0B4J1X5 117 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 CNIH1O95406 144 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 PPIAL4FP0DN26 164 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 TMEM11P17152 192 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 CDKN1BP46527 198 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 CRIP1P50238 77 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 PCP2Q8IVA1 136 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 VSTM2AQ8TAG5 236 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 CREBBPQ92793 2442 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 NDUFB3O43676 98 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 IGLV2-11P01706 119 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 HLA-DRB1P01911 266 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 C2orf91Q6ZV80 131 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 DEFB125Q8N687 156 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 JMJD8Q96S16 334 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 MEGF9Q9H1U4 602 aa9.78□□□□□ -0.84
LDLR-205ENST00000557933 CRYBG3Q68DQ2 2970 aa9.77□□□□□ -0.84
LDLR-205ENST00000557933 TRAV30A0A087WSZ9 112 aa9.77□□□□□ -0.84
LDLR-205ENST00000557933 K7ENP7 123 aa9.77□□□□□ -0.84
LDLR-205ENST00000557933 LIPFP07098 398 aa9.77□□□□□ -0.84
LDLR-205ENST00000557933 HLA-DMBP28068 263 aa9.77□□□□□ -0.84
LDLR-205ENST00000557933 FCGR2BP31994 310 aaPredicted RBP9.77□□□□□ -0.84
LDLR-205ENST00000557933 IGKV2-40A0A087WW87 121 aaPredicted RBP9.77□□□□□ -0.85
LDLR-205ENST00000557933 A0A1B0GUT8 65 aa9.77□□□□□ -0.85
LDLR-205ENST00000557933 C17orf100A8MU93 164 aa9.77□□□□□ -0.85
LDLR-205ENST00000557933 ITGB1BP1O14713 200 aa9.77□□□□□ -0.85
LDLR-205ENST00000557933 IGKV2D-40P01614 121 aaPredicted RBP9.77□□□□□ -0.85
LDLR-205ENST00000557933 IL4P05112 153 aa9.77□□□□□ -0.85
LDLR-205ENST00000557933 LOXP28300 417 aaPredicted RBP9.77□□□□□ -0.85
LDLR-205ENST00000557933 RHOGP84095 191 aa9.77□□□□□ -0.85
LDLR-205ENST00000557933 Q6ZS92 163 aa9.77□□□□□ -0.85
LDLR-205ENST00000557933 BPIFA4PQ86YQ2 179 aa9.77□□□□□ -0.85
LDLR-205ENST00000557933 RAB9BQ9NP90 201 aa9.77□□□□□ -0.85
LDLR-205ENST00000557933 MSRB1Q9NZV6 116 aa9.77□□□□□ -0.85
LDLR-205ENST00000557933 RABAC1Q9UI14 185 aa9.77□□□□□ -0.85
LDLR-205ENST00000557933 GATA4P43694 442 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 SAPCD1Q5SSQ6 148 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 RASL11AQ6T310 242 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 ATP5L2Q7Z4Y8 100 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 PIP4P2Q8N4L2 257 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 RASL11BQ9BPW5 248 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 THAP8Q8NA92 274 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 DEFB104AQ8WTQ1 72 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 FMC1Q96HJ9 113 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 ZNF747Q9BV97 191 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 DYNLRB1Q9NP97 96 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 KLF12Q9Y4X4 402 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 MBD3L4A6NDZ8 208 aaPredicted RBP9.76□□□□□ -0.85
LDLR-205ENST00000557933 MBD3L3A6NE82 208 aaPredicted RBP9.76□□□□□ -0.85
LDLR-205ENST00000557933 MBD3L5A6NJ08 208 aaPredicted RBP9.76□□□□□ -0.85
LDLR-205ENST00000557933 EVI2AP22794 236 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 LYZL1Q6UWQ5 148 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 MTURNQ8N3F0 131 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 MBD3L2Q8NHZ7 208 aaPredicted RBP9.76□□□□□ -0.85
LDLR-205ENST00000557933 C1RLQ9NZP8 487 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 INSIG2Q9Y5U4 225 aa9.76□□□□□ -0.85
LDLR-205ENST00000557933 IGHV3-66A0A0C4DH42 116 aa9.75□□□□□ -0.85
LDLR-205ENST00000557933 DKK2Q9UBU2 259 aa9.75□□□□□ -0.85
LDLR-205ENST00000557933 A0A096LNJ9 63 aa9.75□□□□□ -0.85
LDLR-205ENST00000557933 GAGE10A6NGK3 116 aa9.75□□□□□ -0.85
LDLR-205ENST00000557933 K7ERJ3 54 aa9.75□□□□□ -0.85
LDLR-205ENST00000557933 SPRY2O43597 315 aa9.75□□□□□ -0.85
LDLR-205ENST00000557933 IGKV1-17P01599 117 aa9.75□□□□□ -0.85
LDLR-205ENST00000557933 IGLC1P0CG04 106 aa9.75□□□□□ -0.85
LDLR-205ENST00000557933 IGHV1-8P0DP01 117 aa9.75□□□□□ -0.85
LDLR-205ENST00000557933 C12orf54Q6X4T0 127 aa9.75□□□□□ -0.85
LDLR-205ENST00000557933 C8orf46Q8TAG6 207 aa9.75□□□□□ -0.85
LDLR-205ENST00000557933 TMEM186Q96B77 213 aa9.75□□□□□ -0.85
LDLR-205ENST00000557933 NPIPB5A8MRT5 1133 aa9.74□□□□□ -0.85
LDLR-205ENST00000557933 TMEM178BH3BS89 294 aa9.74□□□□□ -0.85
LDLR-205ENST00000557933 CRXO43186 299 aaPredicted RBP9.74□□□□□ -0.85
LDLR-205ENST00000557933 GATA1P15976 413 aaPredicted RBP9.74□□□□□ -0.85
LDLR-205ENST00000557933 CHCHD1Q96BP2 118 aaKnown RBP9.74□□□□□ -0.85
LDLR-205ENST00000557933 SIGLEC9Q9Y336 463 aa9.74□□□□□ -0.85
LDLR-205ENST00000557933 PTPRQQ9UMZ3 2332 aa9.74□□□□□ -0.85
LDLR-205ENST00000557933 TMEM108Q6UXF1 575 aa9.74□□□□□ -0.85
LDLR-205ENST00000557933 PPP1R27Q86WC6 154 aa9.74□□□□□ -0.85
LDLR-205ENST00000557933 SIGLEC8Q9NYZ4 499 aa9.74□□□□□ -0.85
LDLR-205ENST00000557933 PSG8Q9UQ74 426 aa9.74□□□□□ -0.85
LDLR-205ENST00000557933 IGHV3-49A0A0A0MS15 119 aa9.73□□□□□ -0.85
LDLR-205ENST00000557933 HES1Q14469 280 aa9.73□□□□□ -0.85
LDLR-205ENST00000557933 TMEM97Q5BJF2 176 aa9.73□□□□□ -0.85
LDLR-205ENST00000557933 HSPB8Q9UJY1 196 aa9.73□□□□□ -0.85
LDLR-205ENST00000557933 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.73□□□□□ -0.853e-7■■■□□ 14.8
LDLR-205ENST00000557933 TMEM8BA6NDV4 472 aa9.73□□□□□ -0.85
LDLR-205ENST00000557933 OVOL3O00110 214 aa9.73□□□□□ -0.85
LDLR-205ENST00000557933 TEX36Q5VZQ5 186 aa9.73□□□□□ -0.85
LDLR-205ENST00000557933 AP1S3Q96PC3 154 aa9.73□□□□□ -0.85
LDLR-205ENST00000557933 HIST1H1AQ02539 215 aaPredicted RBP9.72□□□□□ -0.85
LDLR-205ENST00000557933 KLRD1Q13241 179 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 C1orf185Q5T7R7 199 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 LCNL1Q6ZST4 164 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 STXBP6Q8NFX7 210 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 A0A0G2JNJ9 132 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 TEX22C9J3V5 150 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 PRR30Q53SZ7 412 aaPredicted RBP9.72□□□□□ -0.85
LDLR-205ENST00000557933 TRGV9Q99603 122 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 NDFIP1Q9BT67 221 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 Q9UFV3 132 aa9.72□□□□□ -0.85
LDLR-205ENST00000557933 NPYP01303 97 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms