RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 ZNF266Q14584 549 aa6.66□□□□□ -1.34
CHD8-214ENST00000557727 LGALSLQ3ZCW2 172 aaPredicted RBP6.66□□□□□ -1.34
CHD8-214ENST00000557727 Q6ZRG5 221 aa6.66□□□□□ -1.34
CHD8-214ENST00000557727 GTSCR1Q86UQ5 136 aa6.66□□□□□ -1.34
CHD8-214ENST00000557727 APRG1Q8IVJ8 170 aa6.66□□□□□ -1.34
CHD8-214ENST00000557727 HSD17B11Q8NBQ5 300 aa6.66□□□□□ -1.34
CHD8-214ENST00000557727 OR1L4Q8NGR5 311 aa6.66□□□□□ -1.34
CHD8-214ENST00000557727 PPP1R14BQ96C90 147 aa6.66□□□□□ -1.34
CHD8-214ENST00000557727 C20orf173Q96LM9 149 aa6.66□□□□□ -1.34
CHD8-214ENST00000557727 PFDN5Q99471 154 aa6.66□□□□□ -1.34
CHD8-214ENST00000557727 PSMG3Q9BT73 122 aaPredicted RBP6.66□□□□□ -1.34
CHD8-214ENST00000557727 SLC25A2Q9BXI2 301 aa6.66□□□□□ -1.34
CHD8-214ENST00000557727 BORCS7-ASMTA0A0B4J1R7 106 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 C17orf112F2Z3M2 114 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 SLC17A3O00476 420 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 BCL2L11O43521 198 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 ZNF688P0C7X2 276 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 RPL7P18124 248 aaKnown RBP6.65□□□□□ -1.34
CHD8-214ENST00000557727 DEFB1P60022 68 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 RAB2AP61019 212 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 RPL11P62913 178 aaKnown RBP6.65□□□□□ -1.34
CHD8-214ENST00000557727 FFAR4Q5NUL3 377 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 TMUB2Q71RG4 321 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 MIR17HGQ75NE6 70 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 C9orf62Q8N4C0 152 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 SCGB1C1Q8TD33 95 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 SAT2Q96F10 170 aaPredicted RBP6.65□□□□□ -1.34
CHD8-214ENST00000557727 GPR82Q96P67 336 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 ARPC5LQ9BPX5 153 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 KCNIP2Q9NS61 270 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 TMEM14CQ9P0S9 112 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 PFDN2Q9UHV9 154 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 FUT9Q9Y231 359 aa6.65□□□□□ -1.34
CHD8-214ENST00000557727 BOLA2-SMG1P6H3BVE0 249 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 DNASE2O00115 360 aaPredicted RBP6.64□□□□□ -1.35
CHD8-214ENST00000557727 EIF3GO75821 320 aaKnown RBP eCLIP6.64□□□□□ -1.35
CHD8-214ENST00000557727 NDUFB4O95168 129 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 SNRPCP09234 159 aaKnown RBP6.64□□□□□ -1.35
CHD8-214ENST00000557727 PYYP10082 97 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 SPP1P10451 314 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 HOXA5P20719 270 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 C4BPBP20851 252 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 HLA-DMBP28068 263 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 GALR1P47211 349 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 PSMB3P49720 205 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 NKX2-5P52952 324 aaPredicted RBP6.64□□□□□ -1.35
CHD8-214ENST00000557727 DEFB131AP59861 70 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 PAFAH1B2P68402 229 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 FAM78BQ5VT40 261 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 IGFL4Q6B9Z1 124 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 SSX7Q7RTT5 188 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 SBSPONQ8IVN8 264 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 RPP25LQ8N5L8 163 aaKnown RBP6.64□□□□□ -1.35
CHD8-214ENST00000557727 ZNF709Q8N972 641 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 FXYD5Q96DB9 178 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 B9D2Q9BPU9 175 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 ZNF471Q9BX82 626 aaPredicted RBP6.64□□□□□ -1.35
CHD8-214ENST00000557727 MRPL32Q9BYC8 188 aaKnown RBP6.64□□□□□ -1.35
CHD8-214ENST00000557727 HRH4Q9H3N8 390 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 SRD5A3Q9H8P0 318 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 ZNF586Q9NXT0 402 aa6.64□□□□□ -1.35
CHD8-214ENST00000557727 H3BTX0 84 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 ISLRO14498 428 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 JTBO76095 146 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 GIG44P09565 113 aaPredicted RBP6.63□□□□□ -1.35
CHD8-214ENST00000557727 M6PRP20645 277 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 SERF2P84101 59 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 ZNF726P1Q15940 193 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 DEFB121Q5J5C9 76 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 PSMG4Q5JS54 123 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 GDF5OSQ5U4N7 250 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 BPIFA4PQ86YQ2 179 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 RNF182Q8N6D2 247 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 STOML3Q8TAV4 291 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 ZNF331Q9NQX6 463 aaPredicted RBP6.63□□□□□ -1.35
CHD8-214ENST00000557727 RPRMQ9NS64 109 aa6.63□□□□□ -1.35
CHD8-214ENST00000557727 TRBV19A0A075B6N1 114 aa6.62□□□□□ -1.35
CHD8-214ENST00000557727 KNCNA6PVL3 124 aa6.62□□□□□ -1.35
CHD8-214ENST00000557727 A8MTW9 85 aa6.62□□□□□ -1.35
CHD8-214ENST00000557727 S100A7P31151 101 aa6.62□□□□□ -1.35
CHD8-214ENST00000557727 MEOX2P50222 304 aa6.62□□□□□ -1.35
CHD8-214ENST00000557727 RHOBP62745 196 aa6.62□□□□□ -1.35
CHD8-214ENST00000557727 EIF5AP63241 154 aaKnown RBP6.62□□□□□ -1.35
CHD8-214ENST00000557727 HAGHQ16775 308 aa6.62□□□□□ -1.35
CHD8-214ENST00000557727 TRPT1Q86TN4 253 aaKnown RBP6.62□□□□□ -1.35
CHD8-214ENST00000557727 GNPNAT1Q96EK6 184 aaPredicted RBP6.62□□□□□ -1.35
CHD8-214ENST00000557727 TM2D3Q9BRN9 247 aa6.62□□□□□ -1.35
CHD8-214ENST00000557727 F6UB75 175 aa6.61□□□□□ -1.35
CHD8-214ENST00000557727 H3BMM0 161 aa6.61□□□□□ -1.35
CHD8-214ENST00000557727 ZNF253O75346 499 aa6.61□□□□□ -1.35
CHD8-214ENST00000557727 STAG3L2P0CL84 134 aa6.61□□□□□ -1.35
CHD8-214ENST00000557727 STAG3L3P0CL85 134 aa6.61□□□□□ -1.35
CHD8-214ENST00000557727 PRB4P10163 310 aaPredicted RBP6.61□□□□□ -1.35
CHD8-214ENST00000557727 HIST1H1EP10412 219 aaKnown RBP6.61□□□□□ -1.35
CHD8-214ENST00000557727 TPT1P13693 172 aaKnown RBP6.61□□□□□ -1.35
CHD8-214ENST00000557727 HLA-DRB4P13762 266 aa6.61□□□□□ -1.35
CHD8-214ENST00000557727 ATF4P18848 351 aaPredicted RBP6.61□□□□□ -1.35
CHD8-214ENST00000557727 CMC4P56277 68 aaPredicted RBP6.61□□□□□ -1.35
CHD8-214ENST00000557727 SNRPD3P62318 126 aaKnown RBP6.61□□□□□ -1.35
CHD8-214ENST00000557727 ACOT6Q3I5F7 207 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms