RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 TM2D3Q9BRN9 247 aa10.95□□□□□ -0.66
VIPAS39-210ENST00000557466 HRH4Q9H3N8 390 aa10.95□□□□□ -0.66
VIPAS39-210ENST00000557466 BCL2L11O43521 198 aa10.94□□□□□ -0.66
VIPAS39-210ENST00000557466 JTBO76095 146 aa10.94□□□□□ -0.66
VIPAS39-210ENST00000557466 HLA-DMBP28068 263 aa10.94□□□□□ -0.66
VIPAS39-210ENST00000557466 RHOBP62745 196 aa10.94□□□□□ -0.66
VIPAS39-210ENST00000557466 FAM122CQ6P4D5 195 aa10.94□□□□□ -0.66
VIPAS39-210ENST00000557466 TRPT1Q86TN4 253 aaKnown RBP10.94□□□□□ -0.66
VIPAS39-210ENST00000557466 GNPNAT1Q96EK6 184 aaPredicted RBP10.94□□□□□ -0.66
VIPAS39-210ENST00000557466 ZNF331Q9NQX6 463 aaPredicted RBP10.94□□□□□ -0.66
VIPAS39-210ENST00000557466 ZNF586Q9NXT0 402 aa10.94□□□□□ -0.66
VIPAS39-210ENST00000557466 KANTRA0A1W2PQU2 76 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 APOC4P55056 127 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 SERF2P84101 59 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 GDF5OSQ5U4N7 250 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 TMUB2Q71RG4 321 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 STHQ8IWL8 128 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 OR10G4Q8NGN3 311 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 OR10G9Q8NGN4 311 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 OR10G7Q8NGN6 311 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 LRRC20Q8TCA0 184 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 SAT2Q96F10 170 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 ZNF503Q96F45 646 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 SLC50A1Q9BRV3 221 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 RETNQ9HD89 108 aa10.93□□□□□ -0.66
VIPAS39-210ENST00000557466 KIR2DL5BA0A0G2JN68 375 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 KIR2DL5BA0A0G2JPC4 375 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 F6UB75 175 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 OR7C2O60412 319 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 OR10J4P0C629 311 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 NHLRC4P0CG21 123 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 HIST1H1EP10412 219 aaKnown RBP10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 HLA-DRB4P13762 266 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 GUK1Q16774 197 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 LGALSLQ3ZCW2 172 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 KHDC3LQ587J8 217 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 FOXI2Q6ZQN5 318 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 KIR2DL5AQ8N109 375 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 KIR2DL5BQ8NHK3 375 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 PAXXQ9BUH6 204 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 ZNF471Q9BX82 626 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 OR51M1Q9H341 326 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 SAV1Q9H4B6 383 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 RPRMQ9NS64 109 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 HLA-DRB4X5D2U9 266 aa10.92□□□□□ -0.66
VIPAS39-210ENST00000557466 DNAH9Q9NYC9 4486 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 TRBV19A0A075B6N1 114 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 A0A1W2PPV4 95 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 H3BMM0 161 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 PFDN1O60925 122 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 ZNF253O75346 499 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 NDUFB4O95168 129 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 PRB4P10163 310 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 CDC34P49427 236 aaPredicted RBP10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 TAS2R45P59539 299 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 PSG3Q16557 428 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 TMEM41BQ5BJD5 291 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 RPP25LQ8N5L8 163 aaKnown RBP10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 ZNF738Q8NE65 137 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 BLNKQ8WV28 456 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 FXYD5Q96DB9 178 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 HYLS1Q96M11 299 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 SPATA25Q9BR10 227 aa10.91□□□□□ -0.66
VIPAS39-210ENST00000557466 A0A0J9YX75 114 aa10.9□□□□□ -0.66
VIPAS39-210ENST00000557466 HMGB3O15347 200 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-210ENST00000557466 MBP02144 154 aa10.9□□□□□ -0.66
VIPAS39-210ENST00000557466 SPP1P10451 314 aa10.9□□□□□ -0.66
VIPAS39-210ENST00000557466 UBE2L3P68036 154 aaKnown RBP10.9□□□□□ -0.66
VIPAS39-210ENST00000557466 RNF141Q8WVD5 230 aa10.9□□□□□ -0.66
VIPAS39-210ENST00000557466 ZMAT4Q9H898 229 aa10.9□□□□□ -0.66
VIPAS39-210ENST00000557466 UBE2CO00762 179 aa10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 CA1P00915 261 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 NBEAP1P0C6P0 100 aa10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 C4BPBP20851 252 aa10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 PDE6HQ13956 83 aa10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 DEFB135Q30KP9 77 aa10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 ZFP69Q49AA0 526 aa10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 EBLN2Q6P2I7 272 aa10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 SSX7Q7RTT5 188 aa10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 RAB24Q969Q5 203 aa10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 PHYHIPLQ96FC7 376 aa10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 RCHY1Q96PM5 261 aa10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 CSTL1Q9H114 145 aa10.89□□□□□ -0.67
VIPAS39-210ENST00000557466 ZNF705FA8MVS1 300 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 IGKV3-20P01619 116 aa10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 ZNF705DP0CH99 300 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 ZNF705BP0CI00 300 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 ARL14EPLP0DKL9 152 aa10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 ZNF726P1Q15940 193 aa10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 AKR1C8PQ5T2L2 129 aa10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 MORN3Q6PF18 240 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 PQLC2Q6ZP29 291 aa10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 C9orf62Q8N4C0 152 aa10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 OR4B1Q8NGF8 309 aa10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 RPUSD4Q96CM3 377 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 U3KQK5 164 aa10.88□□□□□ -0.67
VIPAS39-210ENST00000557466 M0R3E3 92 aa10.87□□□□□ -0.67
VIPAS39-210ENST00000557466 GIG44P09565 113 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-210ENST00000557466 STAG3L2P0CL84 134 aa10.87□□□□□ -0.67
VIPAS39-210ENST00000557466 STAG3L3P0CL85 134 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms