RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 KIF25-AS1Q9Y6Z4 181 aa5.96□□□□□ -1.46
NEDD1-211ENST00000557454 TRAV8-3A0A0A6YYJ7 113 aa5.95□□□□□ -1.46
NEDD1-211ENST00000557454 CXCL3P19876 107 aa5.95□□□□□ -1.46
NEDD1-211ENST00000557454 AKR1C2P52895 323 aa5.95□□□□□ -1.46
NEDD1-211ENST00000557454 TCL1AP56279 114 aa5.95□□□□□ -1.46
NEDD1-211ENST00000557454 TIRAPP58753 221 aa5.95□□□□□ -1.46
NEDD1-211ENST00000557454 LINC00310P59036 64 aa5.95□□□□□ -1.46
NEDD1-211ENST00000557454 LYSMD2Q8IV50 215 aa5.95□□□□□ -1.46
NEDD1-211ENST00000557454 NHLRC2Q8NBF2 726 aa5.95□□□□□ -1.46
NEDD1-211ENST00000557454 OR1B1Q8NGR6 318 aa5.95□□□□□ -1.46
NEDD1-211ENST00000557454 PYDC1Q8WXC3 89 aa5.95□□□□□ -1.46
NEDD1-211ENST00000557454 UFD1Q92890 307 aa5.95□□□□□ -1.46
NEDD1-211ENST00000557454 RPUSD4Q96CM3 377 aaKnown RBP5.95□□□□□ -1.46
NEDD1-211ENST00000557454 MND1Q9BWT6 205 aa5.95□□□□□ -1.46
NEDD1-211ENST00000557454 HEYLQ9NQ87 328 aaPredicted RBP5.95□□□□□ -1.46
NEDD1-211ENST00000557454 MEIS3P1A6NDR6 274 aa5.94□□□□□ -1.46
NEDD1-211ENST00000557454 PHOX2AO14813 284 aa5.94□□□□□ -1.46
NEDD1-211ENST00000557454 HRH1P35367 487 aa5.94□□□□□ -1.46
NEDD1-211ENST00000557454 RFX2P48378 723 aa5.94□□□□□ -1.46
NEDD1-211ENST00000557454 KLF9Q13886 244 aaPredicted RBP5.94□□□□□ -1.46
NEDD1-211ENST00000557454 SPHARQ15513 63 aa5.94□□□□□ -1.46
NEDD1-211ENST00000557454 REG3GQ6UW15 175 aa5.94□□□□□ -1.46
NEDD1-211ENST00000557454 C10orf67Q8IYJ2 551 aa5.94□□□□□ -1.46
NEDD1-211ENST00000557454 ZNF555Q8NEP9 628 aa5.94□□□□□ -1.46
NEDD1-211ENST00000557454 ZNF479Q96JC4 524 aa5.94□□□□□ -1.46
NEDD1-211ENST00000557454 PSORS1C1Q9UIG5 152 aa5.94□□□□□ -1.46
NEDD1-211ENST00000557454 LSM2Q9Y333 95 aaKnown RBP5.94□□□□□ -1.46
NEDD1-211ENST00000557454 A0A0G2JRQ6 117 aa5.93□□□□□ -1.46
NEDD1-211ENST00000557454 SNRPGP15A8MWD9 76 aa5.93□□□□□ -1.46
NEDD1-211ENST00000557454 PDCD5O14737 125 aa5.93□□□□□ -1.46
NEDD1-211ENST00000557454 FABP5Q01469 135 aa5.93□□□□□ -1.46
NEDD1-211ENST00000557454 DHRS11Q6UWP2 260 aa5.93□□□□□ -1.46
NEDD1-211ENST00000557454 COX11Q9Y6N1 276 aa5.93□□□□□ -1.46
NEDD1-211ENST00000557454 TMEM56-RWDD3S4R434 201 aa5.93□□□□□ -1.46
NEDD1-211ENST00000557454 IGKV1OR2-108A0A075B7D4 117 aa5.92□□□□□ -1.46
NEDD1-211ENST00000557454 LINC00854A0A1B0GVQ3 168 aa5.92□□□□□ -1.46
NEDD1-211ENST00000557454 SMIM30A4D0T7 59 aa5.92□□□□□ -1.46
NEDD1-211ENST00000557454 SCGNO76038 276 aa5.92□□□□□ -1.46
NEDD1-211ENST00000557454 S100GP29377 79 aa5.92□□□□□ -1.46
NEDD1-211ENST00000557454 SPCS3P61009 180 aa5.92□□□□□ -1.46
NEDD1-211ENST00000557454 LAIR2Q6ISS4 152 aa5.92□□□□□ -1.46
NEDD1-211ENST00000557454 DAZ4Q86SG3 579 aaKnown RBP5.92□□□□□ -1.46
NEDD1-211ENST00000557454 OR4D5Q8NGN0 318 aa5.92□□□□□ -1.46
NEDD1-211ENST00000557454 ZNF431Q8TF32 576 aaPredicted RBP5.92□□□□□ -1.46
NEDD1-211ENST00000557454 DNAJC30Q96LL9 226 aa5.92□□□□□ -1.46
NEDD1-211ENST00000557454 GPR82Q96P67 336 aa5.92□□□□□ -1.46
NEDD1-211ENST00000557454 DAZ3Q9NR90 486 aaKnown RBP5.92□□□□□ -1.46
NEDD1-211ENST00000557454 IGKV2D-24A0A075B6R9 120 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 TRAV18A0A075B6X5 111 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 TRAV8-1A0A0A6YYK1 113 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 PMP2P02689 132 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 FABP1P07148 127 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 GNGT1P63211 74 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 TRIM16LQ309B1 348 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 ANXA2RQ3ZCQ2 193 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 SH2D6Q7Z4S9 175 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 IQCF2Q8IXL9 164 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 EIF4E3Q8N5X7 224 aaKnown RBP5.91□□□□□ -1.46
NEDD1-211ENST00000557454 C9orf16Q9BUW7 83 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 VAX2Q9UIW0 290 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 TP53TG3Q9ULZ0 132 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
NEDD1-211ENST00000557454 CEBPZOSA8MTT3 80 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 PRAC2D3DTV9 90 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 PITX3O75364 302 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 ATG12O94817 140 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 RAB3BP20337 219 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 LEPP41159 167 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 PRR3P79522 188 aaKnown RBP5.9□□□□□ -1.46
NEDD1-211ENST00000557454 TRAM1Q15629 374 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 PRR4Q16378 134 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 NMSQ5H8A3 153 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 STEAP1BQ6NZ63 245 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 FAM122CQ6P4D5 195 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 RMI2Q96E14 147 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 ZC2HC1AQ96GY0 325 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 SLC35E1Q96K37 410 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 KRTAP9-9Q9BYP9 154 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 FKBP14Q9NWM8 211 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 SLC45A2Q9UMX9 530 aa5.9□□□□□ -1.46
NEDD1-211ENST00000557454 TRAV1-2A0A0B4J238 106 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 GGTLC3B5MD39 225 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 CT45A10P0DMU9 189 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 ORM2P19652 201 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 AARDQ4LEZ3 155 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 C14orf177Q52M58 125 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 IBA57Q5T440 356 aaKnown RBP5.89□□□□□ -1.47
NEDD1-211ENST00000557454 ZBTB8BQ8NAP8 495 aaPredicted RBP5.89□□□□□ -1.47
NEDD1-211ENST00000557454 RNASE11Q8TAA1 199 aaKnown RBP5.89□□□□□ -1.47
NEDD1-211ENST00000557454 LRRC20Q8TCA0 184 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 NRG4Q8WWG1 115 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 CYGBQ8WWM9 190 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 RAB24Q969Q5 203 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 TP53RKQ96S44 253 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 IFT46Q9NQC8 304 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 DIABLOQ9NR28 239 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 RHBDL2Q9NX52 303 aa5.89□□□□□ -1.47
NEDD1-211ENST00000557454 A0A087WYN8 130 aa5.88□□□□□ -1.47
NEDD1-211ENST00000557454 C7orf71A4D174 169 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms