RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 FGF7P21781 194 aa11.89□□□□□ -0.51
VSX1-207ENST00000557285 RHOBP62745 196 aa11.89□□□□□ -0.51
VSX1-207ENST00000557285 HBG1P69891 147 aa11.89□□□□□ -0.51
VSX1-207ENST00000557285 HBG2P69892 147 aa11.89□□□□□ -0.51
VSX1-207ENST00000557285 IL15RAQ13261 267 aa11.89□□□□□ -0.51
VSX1-207ENST00000557285 C1orf158Q8N1D5 194 aa11.89□□□□□ -0.51
VSX1-207ENST00000557285 RPP25LQ8N5L8 163 aaKnown RBP11.89□□□□□ -0.51
VSX1-207ENST00000557285 OR11H7Q8NGC8 314 aa11.89□□□□□ -0.51
VSX1-207ENST00000557285 TMEM37Q8WXS4 190 aa11.89□□□□□ -0.51
VSX1-207ENST00000557285 PPP1R14DQ9NXH3 145 aa11.89□□□□□ -0.51
VSX1-207ENST00000557285 WDR83OSQ9Y284 106 aa11.89□□□□□ -0.51
VSX1-207ENST00000557285 RFNGQ9Y644 331 aa11.89□□□□□ -0.51
VSX1-207ENST00000557285 TRAV5A0A0B4J249 113 aa11.88□□□□□ -0.51
VSX1-207ENST00000557285 CXCL3P19876 107 aa11.88□□□□□ -0.51
VSX1-207ENST00000557285 S100A11P31949 105 aa11.88□□□□□ -0.51
VSX1-207ENST00000557285 OPCMLQ14982 345 aa11.88□□□□□ -0.51
VSX1-207ENST00000557285 AMTNQ6UX39 209 aa11.88□□□□□ -0.51
VSX1-207ENST00000557285 Q6ZRG5 221 aa11.88□□□□□ -0.51
VSX1-207ENST00000557285 NEU1Q99519 415 aa11.88□□□□□ -0.51
VSX1-207ENST00000557285 KMT2AQ03164 3969 aa11.88□□□□□ -0.51
VSX1-207ENST00000557285 TRAV12-2A0A075B6T6 113 aa11.87□□□□□ -0.51
VSX1-207ENST00000557285 DEFB131BA0A096LNP1 70 aa11.87□□□□□ -0.51
VSX1-207ENST00000557285 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
VSX1-207ENST00000557285 MRPS12O15235 138 aaKnown RBP11.87□□□□□ -0.51
VSX1-207ENST00000557285 HBE1P02100 147 aa11.87□□□□□ -0.51
VSX1-207ENST00000557285 PRM2P04554 102 aa11.87□□□□□ -0.51
VSX1-207ENST00000557285 PSG3Q16557 428 aa11.87□□□□□ -0.51
VSX1-207ENST00000557285 BPIFA4PQ86YQ2 179 aa11.87□□□□□ -0.51
VSX1-207ENST00000557285 BAP18Q8IXM2 172 aa11.87□□□□□ -0.51
VSX1-207ENST00000557285 DNAJC4Q9NNZ3 241 aa11.87□□□□□ -0.51
VSX1-207ENST00000557285 RNF24Q9Y225 148 aa11.87□□□□□ -0.51
VSX1-207ENST00000557285 IGHV4-4A0A075B6R2 117 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 LOC102723971A0A1B0GUV8 181 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 SLC17A3O00476 420 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 INSP01308 110 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 RLN2P04090 185 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 SPART-AS1P0CW21 52 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 DEFA1P59665 94 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 DEFA3P59666 94 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 B2MP61769 119 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 NHLH2Q02577 135 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 VWC2Q2TAL6 325 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 LGALS9CQ6DKI2 356 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 LCN15Q6UWW0 184 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 OR8A1Q8NGG7 326 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 THAP6Q8TBB0 222 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 RPUSD4Q96CM3 377 aaKnown RBP11.86□□□□□ -0.51
VSX1-207ENST00000557285 IGF2BP2-AS1Q96M15 143 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 SLC39A9Q9NUM3 307 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 PLA2G2EQ9NZK7 142 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 OR5AC2Q9NZP5 309 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 APLNQ9ULZ1 77 aa11.86□□□□□ -0.51
VSX1-207ENST00000557285 TMEM189A5PLL7 270 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 A8MTW9 85 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 ZNF705GA8MUZ8 300 aaPredicted RBP11.85□□□□□ -0.51
VSX1-207ENST00000557285 SSNA1O43805 119 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 PRAF2O60831 178 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 HTN3P15516 51 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 PRR20EP86478 221 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 PRR20CP86479 221 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 PRR20DP86480 221 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 PRR20BP86481 221 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 PRR20AP86496 221 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 CLINT1Q14677 625 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 RRN3P1Q2M238 152 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 FAM222AQ5U5X8 452 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 OR1L4Q8NGR5 311 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 ZNF331Q9NQX6 463 aaPredicted RBP11.85□□□□□ -0.51
VSX1-207ENST00000557285 PXMP4Q9Y6I8 212 aa11.85□□□□□ -0.51
VSX1-207ENST00000557285 H3BQ15 152 aa11.84□□□□□ -0.51
VSX1-207ENST00000557285 BOLA2-SMG1P6H3BVE0 249 aa11.84□□□□□ -0.51
VSX1-207ENST00000557285 CRXO43186 299 aaPredicted RBP11.84□□□□□ -0.51
VSX1-207ENST00000557285 OR5C1Q8NGR4 320 aa11.84□□□□□ -0.51
VSX1-207ENST00000557285 PFDN5Q99471 154 aa11.84□□□□□ -0.51
VSX1-207ENST00000557285 SLC50A1Q9BRV3 221 aa11.84□□□□□ -0.51
VSX1-207ENST00000557285 NMES1Q9C002 83 aa11.84□□□□□ -0.51
VSX1-207ENST00000557285 YTHDF2Q9Y5A9 579 aaKnown RBP11.84□□□□□ -0.51
VSX1-207ENST00000557285 E5RGE8 158 aa11.83□□□□□ -0.52
VSX1-207ENST00000557285 AMBPP02760 352 aa11.83□□□□□ -0.52
VSX1-207ENST00000557285 IGLC2P0DOY2 106 aa11.83□□□□□ -0.52
VSX1-207ENST00000557285 HTN1P15515 57 aa11.83□□□□□ -0.52
VSX1-207ENST00000557285 CXCL2P19875 107 aa11.83□□□□□ -0.52
VSX1-207ENST00000557285 RPL29P47914 159 aaKnown RBP11.83□□□□□ -0.52
VSX1-207ENST00000557285 H2BFSP57053 126 aa11.83□□□□□ -0.52
VSX1-207ENST00000557285 ATP6V1FQ16864 119 aa11.83□□□□□ -0.52
VSX1-207ENST00000557285 MARVELD1Q9BSK0 173 aa11.83□□□□□ -0.52
VSX1-207ENST00000557285 SLC25A31Q9H0C2 315 aa11.83□□□□□ -0.52
VSX1-207ENST00000557285 BATF3Q9NR55 127 aa11.83□□□□□ -0.52
VSX1-207ENST00000557285 DKK2Q9UBU2 259 aa11.83□□□□□ -0.52
VSX1-207ENST00000557285 PRAC2D3DTV9 90 aa11.82□□□□□ -0.52
VSX1-207ENST00000557285 H0YIZ8 118 aa11.82□□□□□ -0.52
VSX1-207ENST00000557285 TCTAP57738 103 aa11.82□□□□□ -0.52
VSX1-207ENST00000557285 GCSAMLQ5JQS6 135 aa11.82□□□□□ -0.52
VSX1-207ENST00000557285 NIPSNAP3BQ9BS92 247 aa11.82□□□□□ -0.52
VSX1-207ENST00000557285 NPCDR1Q9BY65 106 aa11.82□□□□□ -0.52
VSX1-207ENST00000557285 PARD6GQ9BYG4 376 aaPredicted RBP11.82□□□□□ -0.52
VSX1-207ENST00000557285 VPS13DQ5THJ4 4388 aa11.82□□□□□ -0.52
VSX1-207ENST00000557285 J3KRW8 73 aa11.81□□□□□ -0.52
VSX1-207ENST00000557285 CYCSP99999 105 aaKnown RBP11.81□□□□□ -0.52
VSX1-207ENST00000557285 OR10J6PQ8NGY7 276 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms