RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 TMEM106AQ96A25 262 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 PPP3R2Q96LZ3 170 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 YPEL2Q96QA6 119 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 SCGB3A1Q96QR1 104 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 IMMP2LQ96T52 175 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 MIEN1Q9BRT3 115 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 NPCDR1Q9BY65 106 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 PRO1933Q9H354 126 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 SMDT1Q9H4I9 107 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 TAF9BQ9HBM6 251 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 XAGE1AQ9HD64 81 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 MARCOQ9UEW3 520 aaPredicted RBP1.44□□□□□ -2.18
PTPN21-209ENST00000557249 RPL26L1Q9UNX3 145 aaKnown RBP1.44□□□□□ -2.18
PTPN21-209ENST00000557249 ZNF443Q9Y2A4 671 aaPredicted RBP1.44□□□□□ -2.18
PTPN21-209ENST00000557249 MROH2AA6NES4 1674 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 ZNF142P52746 1687 aaPredicted RBP1.44□□□□□ -2.18
PTPN21-209ENST00000557249 CUL7Q14999 1698 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 SHPRHQ149N8 1683 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 EHBP1L1Q8N3D4 1523 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 TOPBP1Q92547 1522 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 DSCAML1Q8TD84 2053 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 DENND4CQ5VZ89 1909 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 TMEM2Q9UHN6 1383 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 RGPD2P0DJD1 1756 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 IQGAP3Q86VI3 1631 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 RIMBP3Q9UFD9 1639 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
PTPN21-209ENST00000557249 MYOM2P54296 1465 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 GRIN2AQ12879 1464 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 ARAP2Q8WZ64 1704 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 FRMPD1Q5SYB0 1578 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 LAMA4Q16363 1823 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 ALPK3Q96L96 1907 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 A0A0J9YW62 118 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 A0A1W2PQD3 144 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 GRIFINA4D1Z8 144 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 ZNF670-ZNF695F2Z2N8 137 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 H3BMG7 143 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 C3orf84H3BNL1 204 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 K7EM74 188 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 M0R129 80 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 UBFD1O14562 309 aaKnown RBP1.43□□□□□ -2.18
PTPN21-209ENST00000557249 NPFFO15130 113 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 HIST1H2BKO60814 126 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 IGHV3-53P01767 116 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 MT-ND6P03923 174 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 TCRAP04437 139 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 HIST1H2BJP06899 126 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 METTL15P1P0C7V9 234 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 ZNF728P0DKX0 622 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 DEFA4P12838 97 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 CRYGSP22914 178 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 RPL22P35268 128 aaKnown RBP1.43□□□□□ -2.18
PTPN21-209ENST00000557249 PKIAP61925 76 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 FOXF1Q12946 379 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 DIAPH2-AS1Q14236 149 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 LGALSLQ3ZCW2 172 aaPredicted RBP1.43□□□□□ -2.18
PTPN21-209ENST00000557249 KHDC3LQ587J8 217 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 TMEM69Q5SWH9 247 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 ZNF660Q6AZW8 331 aaPredicted RBP1.43□□□□□ -2.18
PTPN21-209ENST00000557249 NOXRED1Q6NXP6 359 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 Q6ZQT7 251 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 PHF5AQ7RTV0 110 aaKnown RBP1.43□□□□□ -2.18
PTPN21-209ENST00000557249 C3orf56Q8N813 242 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 ST20-AS1Q8NBB2 130 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 OR4S1Q8NGB4 309 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 PFN4Q8NHR9 129 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 DEDD2Q8WXF8 326 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 ZNF714Q96N38 554 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 PDCD10Q9BUL8 212 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 ZNF471Q9BX82 626 aaPredicted RBP1.43□□□□□ -2.18
PTPN21-209ENST00000557249 SNHG12Q9BXW3 62 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 REG4Q9BYZ8 158 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 ASF1BQ9NVP2 202 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 MAGI3Q5TCQ9 1506 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 DUOX2Q9NRD8 1548 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 RGPD8O14715 1765 aaPredicted RBP1.43□□□□□ -2.18
PTPN21-209ENST00000557249 SIPA1L3O60292 1781 aaPredicted RBP1.43□□□□□ -2.18
PTPN21-209ENST00000557249 LAMB2P55268 1798 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 RGPD4Q7Z3J3 1758 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 RGPD5Q99666 1765 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 ARFGEF2Q9Y6D5 1785 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 ANK1P16157 1881 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 COL16A1Q07092 1604 aaPredicted RBP1.43□□□□□ -2.18
PTPN21-209ENST00000557249 ABCA6Q8N139 1617 aa1.43□□□□□ -2.18
PTPN21-209ENST00000557249 RNF17Q9BXT8 1623 aaKnown RBP1.43□□□□□ -2.18
PTPN21-209ENST00000557249 TDRD6O60522 2096 aaKnown RBP1.43□□□□□ -2.18
PTPN21-209ENST00000557249 KDM5CP41229 1560 aa1.42□□□□□ -2.18
PTPN21-209ENST00000557249 SAMD9Q5K651 1589 aa1.42□□□□□ -2.18
PTPN21-209ENST00000557249 MYLKQ15746 1914 aa1.42□□□□□ -2.18
PTPN21-209ENST00000557249 PREX1Q8TCU6 1659 aa1.42□□□□□ -2.18
PTPN21-209ENST00000557249 RGPD3A6NKT7 1758 aaPredicted RBP1.42□□□□□ -2.18
PTPN21-209ENST00000557249 STRCQ7RTU9 1775 aa1.42□□□□□ -2.18
PTPN21-209ENST00000557249 UBR2Q8IWV8 1755 aa1.42□□□□□ -2.18
PTPN21-209ENST00000557249 SCN11AQ9UI33 1791 aa1.42□□□□□ -2.18
PTPN21-209ENST00000557249 ABCC6O95255 1503 aa1.42□□□□□ -2.18
PTPN21-209ENST00000557249 EFCAB6Q5THR3 1501 aa1.42□□□□□ -2.18
PTPN21-209ENST00000557249 DOCK4Q8N1I0 1966 aa1.42□□□□□ -2.18
PTPN21-209ENST00000557249 NESP48681 1621 aa1.42□□□□□ -2.18
PTPN21-209ENST00000557249 MADDQ8WXG6 1647 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms