RNA–Protein interactions for RNA: ENST00000557203.1

DCAF4-215, Transcript of DDB1 and CUL4 associated factor 4, human

TSL 4

Gene DCAF4, Length 524 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF4-215	ENST00000557203	FAM210A	Q96ND0	272 aa		11.16	□□□□□ -0.62
DCAF4-215	ENST00000557203	MDFI	Q99750	246 aa		11.16	□□□□□ -0.62
DCAF4-215	ENST00000557203	TXNDC17	Q9BRA2	123 aa		11.16	□□□□□ -0.62
DCAF4-215	ENST00000557203	SLC50A1	Q9BRV3	221 aa		11.16	□□□□□ -0.62
DCAF4-215	ENST00000557203	MCRIP2	Q9BUT9	160 aa	Known RBP	11.16	□□□□□ -0.62
DCAF4-215	ENST00000557203	NKX6-2	Q9C056	277 aa	Predicted RBP	11.16	□□□□□ -0.62
DCAF4-215	ENST00000557203	NRN1	Q9NPD7	142 aa		11.16	□□□□□ -0.62
DCAF4-215	ENST00000557203	GNG13	Q9P2W3	67 aa		11.16	□□□□□ -0.62
DCAF4-215	ENST00000557203	TRAV2	A0A0B4J234	112 aa		11.15	□□□□□ -0.62
DCAF4-215	ENST00000557203	NDUFS6	O75380	124 aa	Known RBP	11.15	□□□□□ -0.62
DCAF4-215	ENST00000557203	NDUFB4	O95168	129 aa		11.15	□□□□□ -0.62
DCAF4-215	ENST00000557203	BCL2	P10415	239 aa		11.15	□□□□□ -0.62
DCAF4-215	ENST00000557203	PSG9	Q00887	426 aa		11.15	□□□□□ -0.62
DCAF4-215	ENST00000557203	BLNK	Q8WV28	456 aa		11.15	□□□□□ -0.62
DCAF4-215	ENST00000557203	ANK2	Q01484	3957 aa		11.15	□□□□□ -0.63
DCAF4-215	ENST00000557203	TENM1	Q9UKZ4	2725 aa		11.14	□□□□□ -0.63
DCAF4-215	ENST00000557203	RAB19	A4D1S5	217 aa		11.14	□□□□□ -0.63
DCAF4-215	ENST00000557203	RBFOX3	A6NFN3	312 aa		11.14	□□□□□ -0.63
DCAF4-215	ENST00000557203	FAM74A7	A6NL05	159 aa		11.14	□□□□□ -0.63
DCAF4-215	ENST00000557203	SOCS3	O14543	225 aa		11.14	□□□□□ -0.63
DCAF4-215	ENST00000557203	TSPAN4	O14817	238 aa		11.14	□□□□□ -0.63
DCAF4-215	ENST00000557203	SAP30	O75446	220 aa		11.14	□□□□□ -0.63
DCAF4-215	ENST00000557203	IGLV1-51	P01701	117 aa		11.14	□□□□□ -0.63
DCAF4-215	ENST00000557203	DCANP1	Q8TF63	244 aa		11.14	□□□□□ -0.63
DCAF4-215	ENST00000557203	SMDT1	Q9H4I9	107 aa		11.14	□□□□□ -0.63
DCAF4-215	ENST00000557203	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.14	□□□□□ -0.63
DCAF4-215	ENST00000557203	CLEC5A	Q9NY25	188 aa		11.14	□□□□□ -0.63
DCAF4-215	ENST00000557203	TRRAP	Q9Y4A5	3859 aa		11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	LOC102723971	A0A1B0GUV8	181 aa		11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	PAGE4	O60829	102 aa		11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	CD33	P20138	364 aa		11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	RPL11	P62913	178 aa	Known RBP	11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	PAFAH1B2	P68402	229 aa		11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	NDUFA5	Q16718	116 aa		11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	CD300E	Q496F6	205 aa	Predicted RBP	11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	ZNF506	Q5JVG8	444 aa		11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	C9orf66	Q5T8R8	295 aa		11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	TCEAL7	Q9BRU2	100 aa		11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	MS4A6A	Q9H2W1	248 aa		11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203		Q9H3A6	140 aa		11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	VAX2	Q9UIW0	290 aa		11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.13	□□□□□ -0.63
DCAF4-215	ENST00000557203	SLC17A3	O00476	420 aa		11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	SNRPC	P09234	159 aa	Known RBP	11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	UBE2G2	P60604	165 aa		11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	RAN	P62826	216 aa	Known RBP	11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	MEF2B	Q02080	365 aa	Predicted RBP	11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	HAGH	Q16775	308 aa		11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	CCDC28A	Q8IWP9	274 aa		11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	TMEM61	Q8N0U2	210 aa		11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	EIF4E3	Q8N5X7	224 aa	Known RBP	11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	ARL6IP6	Q8N6S5	226 aa		11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	SPAG8	Q99932	426 aa	Predicted RBP	11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	AAMDC	Q9H7C9	122 aa		11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	OTOR	Q9NRC9	128 aa		11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	COL6A5	A8TX70	2615 aa		11.12	□□□□□ -0.63
DCAF4-215	ENST00000557203	GGTLC3	B5MD39	225 aa		11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203	C11orf94	C9JXX5	98 aa		11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203		H3BTX0	84 aa		11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203		K7EQG2	157 aa		11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203	ISLR	O14498	428 aa		11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203	WIPF1	O43516	503 aa		11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203	ICAM4	Q14773	271 aa		11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203	TOR2A	Q5JU69	321 aa		11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203	CST9LP1	Q5W188	147 aa		11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203	UQCC3	Q6UW78	93 aa		11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203	MRPL53	Q96EL3	112 aa	Known RBP	11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203	C16orf92	Q96LL3	132 aa		11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203	EIF5A2	Q9GZV4	153 aa	Known RBP	11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203	PRELID1	Q9Y255	219 aa		11.11	□□□□□ -0.63
DCAF4-215	ENST00000557203	TRAV8-2	A0A0B4J237	113 aa		11.1	□□□□□ -0.63
DCAF4-215	ENST00000557203	DNASE2	O00115	360 aa	Predicted RBP	11.1	□□□□□ -0.63
DCAF4-215	ENST00000557203	ID1	P41134	155 aa		11.1	□□□□□ -0.63
DCAF4-215	ENST00000557203	PEA15	Q15121	130 aa		11.1	□□□□□ -0.63
DCAF4-215	ENST00000557203	LCN12	Q6JVE5	192 aa		11.1	□□□□□ -0.63
DCAF4-215	ENST00000557203	COMMD7	Q86VX2	200 aa		11.1	□□□□□ -0.63
DCAF4-215	ENST00000557203	SPATA3	Q8NHX4	192 aa		11.1	□□□□□ -0.63
DCAF4-215	ENST00000557203	RARRES2	Q99969	163 aa		11.1	□□□□□ -0.63
DCAF4-215	ENST00000557203	GPR61	Q9BZJ8	451 aa		11.1	□□□□□ -0.63
DCAF4-215	ENST00000557203	IGKV3-7	A0A075B6H7	116 aa		11.09	□□□□□ -0.63
DCAF4-215	ENST00000557203	PGP	A6NDG6	321 aa		11.09	□□□□□ -0.63
DCAF4-215	ENST00000557203	PDE6D	O43924	150 aa		11.09	□□□□□ -0.63
DCAF4-215	ENST00000557203	ATP5G3	P48201	142 aa		11.09	□□□□□ -0.63
DCAF4-215	ENST00000557203	CD81	P60033	236 aa		11.09	□□□□□ -0.63
DCAF4-215	ENST00000557203	SUMO1	P63165	101 aa	Known RBP	11.09	□□□□□ -0.63
DCAF4-215	ENST00000557203	PRR31	Q5SQ13	230 aa		11.09	□□□□□ -0.63
DCAF4-215	ENST00000557203	EXOC3-AS1	Q8N2X6	119 aa		11.09	□□□□□ -0.63
DCAF4-215	ENST00000557203	C5orf17	Q8NAS9	161 aa		11.09	□□□□□ -0.63
DCAF4-215	ENST00000557203	RXFP4	Q8TDU9	374 aa		11.09	□□□□□ -0.63
DCAF4-215	ENST00000557203	OR4C46	A6NHA9	309 aa		11.08	□□□□□ -0.64
DCAF4-215	ENST00000557203		F6UZH7	168 aa		11.08	□□□□□ -0.64
DCAF4-215	ENST00000557203	TMEM250	H0YL14	139 aa		11.08	□□□□□ -0.64
DCAF4-215	ENST00000557203	SNRPD3	P62318	126 aa	Known RBP	11.08	□□□□□ -0.64
DCAF4-215	ENST00000557203	GBGT1	Q8N5D6	347 aa		11.08	□□□□□ -0.64
DCAF4-215	ENST00000557203	CMTM2	Q8TAZ6	248 aa		11.08	□□□□□ -0.64
DCAF4-215	ENST00000557203	HIST1H2BA	Q96A08	127 aa		11.08	□□□□□ -0.64
DCAF4-215	ENST00000557203	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.08	□□□□□ -0.64
DCAF4-215	ENST00000557203	SELENOK	Q9Y6D0	94 aa		11.08	□□□□□ -0.64
DCAF4-215	ENST00000557203	STAB1	Q9NY15	2570 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms