RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 IGHV3-74A0A0B4J1X5 117 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 TRAV3A0A0B4J244 114 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 HELTA6NFD8 242 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 K7EIM0 57 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 CORTO00230 105 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 PGLYRP1O75594 196 aaPredicted RBP3.34□□□□□ -1.87
HIF1A-209ENST00000556827 ATG12O94817 140 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 MT-CO2P00403 227 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 G6PCP35575 357 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 HSPA13P48723 471 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 TAS2R46P59540 309 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 TSPAN5P62079 268 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 SNRPD3P62318 126 aaKnown RBP3.34□□□□□ -1.87
HIF1A-209ENST00000556827 KCTD21Q4G0X4 260 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 IDNKQ5T6J7 187 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 ZNF818PQ6ZRF7 136 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 H2BFWTQ7Z2G1 175 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 SLC35G3Q8N808 338 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 STXBP6Q8NFX7 210 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 TMEM230Q96A57 120 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 S100A16Q96FQ6 103 aaKnown RBP3.34□□□□□ -1.87
HIF1A-209ENST00000556827 METTL26Q96S19 204 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 PDCD10Q9BUL8 212 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 NXF2Q9GZY0 626 aaKnown RBP3.34□□□□□ -1.87
HIF1A-209ENST00000556827 ENY2Q9NPA8 101 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 TMEM14BQ9NUH8 114 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 TBC1D24Q9ULP9 559 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 DNAH3Q8TD57 4116 aa3.34□□□□□ -1.88
HIF1A-209ENST00000556827 TRAV30A0A087WSZ9 112 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 IGHV3-66A0A0C4DH42 116 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 SMIM31A0A1B0GVY4 71 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 TMEM189A5PLL7 270 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 PANO1I0J062 215 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 M0R2N4 97 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 GPR31O00270 319 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 SPART-AS1P0CW21 52 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 PSMB9P28065 219 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 GNRHRP30968 328 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 FGF9P31371 208 aaPredicted RBP3.33□□□□□ -1.88
HIF1A-209ENST00000556827 HSPE1P61604 102 aaKnown RBP3.33□□□□□ -1.88
HIF1A-209ENST00000556827 DHRS2Q13268 280 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 ACTL10Q5JWF8 245 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 UBE2UQ5VVX9 321 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 SFXN4Q6P4A7 337 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 TOMM20LQ6UXN7 152 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 Q8NAQ8 132 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 OR5H2Q8NGV7 314 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 LGALS14Q8TCE9 139 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 FAM210BQ96KR6 192 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 CNBD2Q96M20 576 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 ZNF2Q9BSG1 426 aaPredicted RBP3.33□□□□□ -1.88
HIF1A-209ENST00000556827 VSIRQ9H7M9 311 aa3.33□□□□□ -1.88
HIF1A-209ENST00000556827 PUS1Q9Y606 427 aaKnown RBP eCLIP3.33□□□□□ -1.88
HIF1A-209ENST00000556827 DNAH9Q9NYC9 4486 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 SMIM9A6NGZ8 99 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 KNCNA6PVL3 124 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 I3L2K1 104 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 GSTZ1O43708 216 aaPredicted RBP3.32□□□□□ -1.88
HIF1A-209ENST00000556827 IGHV3-48P01763 117 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 PMP2P02689 132 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 ZNF688P0C7X2 276 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 RBMY1A1P0DJD3 496 aaKnown RBP3.32□□□□□ -1.88
HIF1A-209ENST00000556827 RBMY1CP0DJD4 496 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 PTHLHP12272 177 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 SDC2P34741 201 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 PRSS3P35030 304 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 OPRK1P41145 380 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 P2RY1P47900 373 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 CAV2P51636 162 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 EMP1P54849 157 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 AQP4P55087 323 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 PRCDQ00LT1 54 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 MXD1Q05195 221 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 RBMY1FQ15415 496 aaKnown RBP3.32□□□□□ -1.88
HIF1A-209ENST00000556827 LGALS9BQ3B8N2 356 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 LINC01620Q4KN68 170 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 PSMG4Q5JS54 123 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 C1orf134Q5TEV5 83 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 RNASE11Q8TAA1 199 aaKnown RBP3.32□□□□□ -1.88
HIF1A-209ENST00000556827 Q8WTZ3 238 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 Q9H521 79 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 RNF167Q9H6Y7 350 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 AUNIPQ9H7T9 357 aa3.32□□□□□ -1.88
HIF1A-209ENST00000556827 TXNL4BQ9NX01 149 aaKnown RBP3.32□□□□□ -1.88
HIF1A-209ENST00000556827 LOC100506127A0A0U1RQW1 187 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 MEIS3P1A6NDR6 274 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 ZNF705EA8MWA4 302 aaPredicted RBP3.31□□□□□ -1.88
HIF1A-209ENST00000556827 H3BMQ9 156 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 ZNF861PO60384 105 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 TMEM50AO95807 157 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 HTN3P15516 51 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 NUP62P37198 522 aaPredicted RBP3.31□□□□□ -1.88
HIF1A-209ENST00000556827 AKR1C2P52895 323 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 TAS2R20P59543 309 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 C12orf74Q32Q52 190 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 TMEM69Q5SWH9 247 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 ZNF767PQ75MW2 155 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 MRGPRFQ96AM1 343 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 C7orf50Q9BRJ6 194 aaKnown RBP3.31□□□□□ -1.88
HIF1A-209ENST00000556827 XCL2Q9UBD3 114 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms