RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ITGB4P16144 1822 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 SBF2Q86WG5 1849 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 DOCK5Q9H7D0 1870 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 TRAV8-2A0A0B4J237 113 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 IGKV1-6A0A0C4DH72 117 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 MDFIC2A0A1B0GVS7 189 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 C7orf71A4D174 169 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 TMEM189A5PLL7 270 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 F8W1H4 67 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 H7C1C5 153 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 K7EP34 96 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 TAX1BP3O14907 124 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 DEGS1O15121 323 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 ZNF737O75373 536 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 APOA2P02652 100 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 GYPAP02724 150 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 CD28P10747 220 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 NTF3P20783 257 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 RPS12P25398 132 aaKnown RBP2.58□□□□□ -2
PRPF39-210ENST00000556718 GRPRP30550 384 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 RHOBP62745 196 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 CCL20P78556 96 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 PSG9Q00887 426 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 MEF2BQ02080 365 aaPredicted RBP2.58□□□□□ -2
PRPF39-210ENST00000556718 HIST1H1AQ02539 215 aaPredicted RBP2.58□□□□□ -2
PRPF39-210ENST00000556718 ZNF90Q03938 601 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 MEF2CQ06413 473 aaPredicted RBP2.58□□□□□ -2
PRPF39-210ENST00000556718 PRDX1Q06830 199 aaKnown RBP2.58□□□□□ -2
PRPF39-210ENST00000556718 FOXF1Q12946 379 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 TDRG1Q3Y452 100 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 CCSMST1Q4G0I0 132 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 ZNF550Q7Z398 422 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 PRNTQ86SH4 94 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 BPIFA4PQ86YQ2 179 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 MIR7-3HGQ8N6C7 128 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 OR4D11Q8NGI4 311 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 OR5D14Q8NGL3 314 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 OR2K2Q8NGT1 345 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 SGMS2Q8NHU3 365 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 PPTC7Q8NI37 304 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 ZNF418Q8TF45 676 aaPredicted RBP2.58□□□□□ -2
PRPF39-210ENST00000556718 FMC1Q96HJ9 113 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 GPER1Q99527 375 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 RTBDNQ9BSG5 229 aaPredicted RBP2.58□□□□□ -2
PRPF39-210ENST00000556718 FAM103A1Q9BTL3 118 aaKnown RBP2.58□□□□□ -2
PRPF39-210ENST00000556718 GNB1LQ9BYB4 327 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 WDR61Q9GZS3 305 aaKnown RBP2.58□□□□□ -2
PRPF39-210ENST00000556718 TMEM126AQ9H061 195 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 GTSF1LQ9H1H1 148 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 NAT8BQ9UHF3 227 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 RABAC1Q9UI14 185 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 ZNF391Q9UJN7 358 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 HSPB8Q9UJY1 196 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 HHLA2Q9UM44 414 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 ZNF443Q9Y2A4 671 aaPredicted RBP2.58□□□□□ -2
PRPF39-210ENST00000556718 IER3IP1Q9Y5U9 82 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 STRCP1A6NGW2 1772 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 NUP98P52948 1817 aa2.58□□□□□ -2
PRPF39-210ENST00000556718 A0A0G2JMZ2 1700 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 LRRC37A2A6NM11 1700 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 LRRC37AA6NMS7 1700 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 IGLV2-18A0A075B6J9 118 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.57□□□□□ -2
PRPF39-210ENST00000556718 CRYM-AS1A6NIL9 109 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 TMEM262E9PQX1 116 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.57□□□□□ -2
PRPF39-210ENST00000556718 TNFP01375 233 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 IGKV1-39P01597 117 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 HLA-DRB1P01911 266 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 IGKV1D-39P04432 117 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 SMIM13P0DJ93 91 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 ZNF728P0DKX0 622 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 HIST1H1DP16402 221 aaKnown RBP2.57□□□□□ -2
PRPF39-210ENST00000556718 CSRP1P21291 193 aaKnown RBP2.57□□□□□ -2
PRPF39-210ENST00000556718 PLCXD2Q0VAA5 305 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 EIF3IQ13347 325 aaKnown RBP2.57□□□□□ -2
PRPF39-210ENST00000556718 PDGFRLQ15198 375 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 TMEM97Q5BJF2 176 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 TIMM23BQ5SRD1 257 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 FKBP1CQ5VVH2 108 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 LCN15Q6UWW0 184 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 DGAT2L6Q6ZPD8 337 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 OLIG3Q7RTU3 272 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 ZIC4Q8N9L1 334 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 ST20-AS1Q8NBB2 130 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 ZNF439Q8NDP4 499 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 ST6GALNAC3Q8NDV1 305 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 OR10X1Q8NGY0 326 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 OR10AG1Q8NH19 301 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 OR5P3Q8WZ94 311 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 CCL17Q92583 94 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 FGF13Q92913 245 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 GALMQ96C23 342 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 SLC25A44Q96H78 314 aaPredicted RBP2.57□□□□□ -2
PRPF39-210ENST00000556718 CXCL16Q9H2A7 254 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 TXNIPQ9H3M7 391 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 SND1-IT1Q9HBX3 110 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.57□□□□□ -2
PRPF39-210ENST00000556718 ERG28Q9UKR5 140 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 HS3ST2Q9Y278 367 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms