RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 IGHV3OR16-13A0A075B7E8 117 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 IGHV3-74A0A0B4J1X5 117 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 TRAV5A0A0B4J249 113 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 MAP1LC3B2A6NCE7 125 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 OR7C2O60412 319 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 H2AFB1P0C5Y9 115 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 NBEAP1P0C6P0 100 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 ARL14EPLP0DKL9 152 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 LEMD1Q68G75 181 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 ALKAL2Q6UX46 152 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 FAM213BQ8TBF2 198 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 MRPL53Q96EL3 112 aaKnown RBP8.45□□□□□ -1.06
FOXN3-212ENST00000556541 MAP1LC3BQ9GZQ8 125 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 MS4A6AQ9H2W1 248 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 UBQLN2Q9UHD9 624 aa8.45□□□□□ -1.06
FOXN3-212ENST00000556541 IGHV3-66A0A0C4DH42 116 aa8.44□□□□□ -1.06
FOXN3-212ENST00000556541 NDUFS6O75380 124 aaKnown RBP8.44□□□□□ -1.06
FOXN3-212ENST00000556541 GCHFRP30047 84 aa8.44□□□□□ -1.06
FOXN3-212ENST00000556541 TAGLN2P37802 199 aaKnown RBP8.44□□□□□ -1.06
FOXN3-212ENST00000556541 ID1P41134 155 aa8.44□□□□□ -1.06
FOXN3-212ENST00000556541 UBE2L3P68036 154 aaKnown RBP8.44□□□□□ -1.06
FOXN3-212ENST00000556541 PSG9Q00887 426 aa8.44□□□□□ -1.06
FOXN3-212ENST00000556541 SSX7Q7RTT5 188 aa8.44□□□□□ -1.06
FOXN3-212ENST00000556541 NKX6-2Q9C056 277 aaPredicted RBP8.44□□□□□ -1.06
FOXN3-212ENST00000556541 ZNF331Q9NQX6 463 aaPredicted RBP8.44□□□□□ -1.06
FOXN3-212ENST00000556541 ZNF586Q9NXT0 402 aa8.44□□□□□ -1.06
FOXN3-212ENST00000556541 PRELID1Q9Y255 219 aa8.44□□□□□ -1.06
FOXN3-212ENST00000556541 CMYA5Q8N3K9 4069 aa8.44□□□□□ -1.06
FOXN3-212ENST00000556541 PKD1L1Q8TDX9 2849 aa8.44□□□□□ -1.06
FOXN3-212ENST00000556541 A0A1W2PRE2 83 aa8.43□□□□□ -1.06
FOXN3-212ENST00000556541 ZNF705EA8MWA4 302 aaPredicted RBP8.43□□□□□ -1.06
FOXN3-212ENST00000556541 H3BQ15 152 aa8.43□□□□□ -1.06
FOXN3-212ENST00000556541 PYYP10082 97 aa8.43□□□□□ -1.06
FOXN3-212ENST00000556541 FHITP49789 147 aa8.43□□□□□ -1.06
FOXN3-212ENST00000556541 FAM74A1Q5RGS3 127 aa8.43□□□□□ -1.06
FOXN3-212ENST00000556541 SFT2D1Q8WV19 159 aa8.43□□□□□ -1.06
FOXN3-212ENST00000556541 TXNDC17Q9BRA2 123 aa8.43□□□□□ -1.06
FOXN3-212ENST00000556541 TCEAL7Q9BRU2 100 aa8.43□□□□□ -1.06
FOXN3-212ENST00000556541 IZUMO1RA6ND01 250 aa8.42□□□□□ -1.06
FOXN3-212ENST00000556541 DNASE2O00115 360 aaPredicted RBP8.42□□□□□ -1.06
FOXN3-212ENST00000556541 RGS13O14921 159 aa8.42□□□□□ -1.06
FOXN3-212ENST00000556541 NDUFB4O95168 129 aa8.42□□□□□ -1.06
FOXN3-212ENST00000556541 SNRPD3P62318 126 aaKnown RBP8.42□□□□□ -1.06
FOXN3-212ENST00000556541 IFITM2Q01629 132 aa8.42□□□□□ -1.06
FOXN3-212ENST00000556541 MANBALQ9NQG1 85 aa8.42□□□□□ -1.06
FOXN3-212ENST00000556541 RPL11P62913 178 aaKnown RBP8.41□□□□□ -1.06
FOXN3-212ENST00000556541 OXLD1Q5BKU9 147 aa8.41□□□□□ -1.06
FOXN3-212ENST00000556541 CLUHP3Q96NS8 147 aa8.41□□□□□ -1.06
FOXN3-212ENST00000556541 OTORQ9NRC9 128 aa8.41□□□□□ -1.06
FOXN3-212ENST00000556541 MGAM2Q2M2H8 2515 aa8.4□□□□□ -1.06
FOXN3-212ENST00000556541 TRAV8-2A0A0B4J237 113 aa8.4□□□□□ -1.06
FOXN3-212ENST00000556541 SERTM2A0A1B0GWG4 89 aa8.4□□□□□ -1.06
FOXN3-212ENST00000556541 NMBP08949 121 aa8.4□□□□□ -1.06
FOXN3-212ENST00000556541 OR10J4P0C629 311 aa8.4□□□□□ -1.06
FOXN3-212ENST00000556541 PSG3Q16557 428 aa8.4□□□□□ -1.06
FOXN3-212ENST00000556541 GUCA2BQ16661 112 aa8.4□□□□□ -1.06
FOXN3-212ENST00000556541 GTSCR1Q86UQ5 136 aa8.4□□□□□ -1.06
FOXN3-212ENST00000556541 RXFP4Q8TDU9 374 aa8.4□□□□□ -1.06
FOXN3-212ENST00000556541 C16orf92Q96LL3 132 aa8.4□□□□□ -1.06
FOXN3-212ENST00000556541 AAMDCQ9H7C9 122 aa8.4□□□□□ -1.06
FOXN3-212ENST00000556541 C19orf73Q9NVV2 129 aa8.4□□□□□ -1.06
FOXN3-212ENST00000556541 A8MTW9 85 aa8.39□□□□□ -1.07
FOXN3-212ENST00000556541 A8MZ25 164 aa8.39□□□□□ -1.07
FOXN3-212ENST00000556541 G3V4G9 280 aa8.39□□□□□ -1.07
FOXN3-212ENST00000556541 SLC17A3O00476 420 aa8.39□□□□□ -1.07
FOXN3-212ENST00000556541 HMGB3O15347 200 aaKnown RBP8.39□□□□□ -1.07
FOXN3-212ENST00000556541 IFNA1P01562 189 aa8.39□□□□□ -1.07
FOXN3-212ENST00000556541 ODF3L2Q3SX64 289 aa8.39□□□□□ -1.07
FOXN3-212ENST00000556541 CLLU1Q5K131 121 aa8.39□□□□□ -1.07
FOXN3-212ENST00000556541 Q9H3A6 140 aa8.39□□□□□ -1.07
FOXN3-212ENST00000556541 MAP6D1Q9H9H5 199 aa8.39□□□□□ -1.07
FOXN3-212ENST00000556541 RBAKDNA6NC62 111 aa8.38□□□□□ -1.07
FOXN3-212ENST00000556541 FBLL1A6NHQ2 334 aaKnown RBP8.38□□□□□ -1.07
FOXN3-212ENST00000556541 FAM74A7A6NL05 159 aa8.38□□□□□ -1.07
FOXN3-212ENST00000556541 OR11H12B2RN74 326 aa8.38□□□□□ -1.07
FOXN3-212ENST00000556541 SLC25A5P05141 298 aaKnown RBP8.38□□□□□ -1.07
FOXN3-212ENST00000556541 FGF8P55075 233 aaPredicted RBP8.38□□□□□ -1.07
FOXN3-212ENST00000556541 RAB14P61106 215 aa8.38□□□□□ -1.07
FOXN3-212ENST00000556541 FOXI2Q6ZQN5 318 aa8.38□□□□□ -1.07
FOXN3-212ENST00000556541 CCDC28AQ8IWP9 274 aa8.38□□□□□ -1.07
FOXN3-212ENST00000556541 GBGT1Q8N5D6 347 aa8.38□□□□□ -1.07
FOXN3-212ENST00000556541 C5orf17Q8NAS9 161 aa8.38□□□□□ -1.07
FOXN3-212ENST00000556541 BLNKQ8WV28 456 aa8.38□□□□□ -1.07
FOXN3-212ENST00000556541 IGKV3-7A0A075B6H7 116 aa8.37□□□□□ -1.07
FOXN3-212ENST00000556541 TRBV7-9A0A0J9YWB2 115 aa8.37□□□□□ -1.07
FOXN3-212ENST00000556541 ZNF688P0C7X2 276 aa8.37□□□□□ -1.07
FOXN3-212ENST00000556541 KRTAP10-11P60412 298 aa8.37□□□□□ -1.07
FOXN3-212ENST00000556541 Q8N1Y9 231 aa8.37□□□□□ -1.07
FOXN3-212ENST00000556541 FAM24BQ8N5W8 94 aa8.37□□□□□ -1.07
FOXN3-212ENST00000556541 TMPRSS5Q9H3S3 457 aa8.37□□□□□ -1.07
FOXN3-212ENST00000556541 SMDT1Q9H4I9 107 aa8.37□□□□□ -1.07
FOXN3-212ENST00000556541 MED9Q9NWA0 146 aa8.37□□□□□ -1.07
FOXN3-212ENST00000556541 PPP1R14DQ9NXH3 145 aa8.37□□□□□ -1.07
FOXN3-212ENST00000556541 DNAH3Q8TD57 4116 aa8.37□□□□□ -1.07
FOXN3-212ENST00000556541 GGTLC3B5MD39 225 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 EIF3GO75821 320 aaKnown RBP eCLIP8.36□□□□□ -1.07
FOXN3-212ENST00000556541 DUSP14O95147 198 aaKnown RBP8.36□□□□□ -1.07
FOXN3-212ENST00000556541 BCL2P10415 239 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms