RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 ZFP92A6NM28 416 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 SLC25A6P12236 298 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 ALDH3B2P48448 385 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 PSG9Q00887 426 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 FAM222AQ5U5X8 452 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 SUMO4Q6EEV6 95 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 LYZL2Q7Z4W2 148 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 SPATA12Q7Z6I5 190 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 CLVS1Q8IUQ0 354 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-220ENST00000556486 C1orf158Q8N1D5 194 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 LRTM2Q8N967 370 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 THAP8Q8NA92 274 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 OR4D5Q8NGN0 318 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 SLC35E1Q96K37 410 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 SOSTQ9BQB4 213 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 PBDC1Q9BVG4 233 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 RBKSQ9H477 322 aa7.06□□□□□ -1.28
SCFD1-220ENST00000556486 IGKV1OR2-108A0A075B7D4 117 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 ANXA3P12429 323 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 AKR1C4P17516 323 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 DEFB1P60022 68 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 SPCS2Q15005 226 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 PIK3CD-AS1Q5SR53 167 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 AMTNQ6UX39 209 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 COQ8AQ8NI60 647 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 DIRAS2Q96HU8 199 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 LINC00052Q96N35 136 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 BCL7BQ9BQE9 202 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 SLC35B3Q9H1N7 401 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 CCDC59Q9P031 241 aaKnown RBP7.05□□□□□ -1.28
SCFD1-220ENST00000556486 RSL24D1Q9UHA3 163 aaKnown RBP7.05□□□□□ -1.28
SCFD1-220ENST00000556486 GOLT1BQ9Y3E0 138 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 MYCBP2O75592 4640 aa7.05□□□□□ -1.28
SCFD1-220ENST00000556486 UBR4Q5T4S7 5183 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 IGHV3OR16-12A0A075B7B8 117 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 PRSS46E5RG02 174 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 IGKV3-20P01619 116 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 HBE1P02100 147 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 INAFM2P0DMQ5 153 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 TSPOP30536 169 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 LYZP61626 148 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 IL18Q14116 193 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 FAM78BQ5VT40 261 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 EBLN2Q6P2I7 272 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 WDR73Q6P4I2 378 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 OR8I2Q8N0Y5 310 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 ARL6IP6Q8N6S5 226 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 DYNC2LI1Q8TCX1 351 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 RAB2BQ8WUD1 216 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 IGF2BP2-AS1Q96M15 143 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 C17orf77Q96MU5 243 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 SPXQ9BT56 116 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 RPRMQ9NS64 109 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 DOK5Q9P104 306 aa7.04□□□□□ -1.28
SCFD1-220ENST00000556486 YTHDF2Q9Y5A9 579 aaKnown RBP7.04□□□□□ -1.28
SCFD1-220ENST00000556486 FAT1Q14517 4588 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 EPM2AB3EWF7 344 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 FUSP35637 526 aaKnown RBP eCLIP7.03□□□□□ -1.28
SCFD1-220ENST00000556486 GALR1P47211 349 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 FXYD7P58549 80 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 KRTAP10-2P60368 255 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 RAB11AP62491 216 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 RRN3P1Q2M238 152 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 TMEM128Q5BJH2 165 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 GPR141Q7Z602 305 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 C15orf53Q8NAA6 179 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 OR4B1Q8NGF8 309 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 DEDD2Q8WXF8 326 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 GPR82Q96P67 336 aa7.03□□□□□ -1.28
SCFD1-220ENST00000556486 CIB3Q96Q77 187 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-220ENST00000556486 MRPS26Q9BYN8 205 aaKnown RBP7.03□□□□□ -1.28
SCFD1-220ENST00000556486 SLIRPQ9GZT3 109 aaKnown RBP7.03□□□□□ -1.28
SCFD1-220ENST00000556486 C5orf52A6NGY3 159 aa7.02□□□□□ -1.29
SCFD1-220ENST00000556486 ZNF98A6NK75 572 aa7.02□□□□□ -1.29
SCFD1-220ENST00000556486 LYRM9A8MSI8 78 aa7.02□□□□□ -1.29
SCFD1-220ENST00000556486 F6UB75 175 aa7.02□□□□□ -1.29
SCFD1-220ENST00000556486 S100A7P31151 101 aa7.02□□□□□ -1.29
SCFD1-220ENST00000556486 TMBIM6P55061 237 aa7.02□□□□□ -1.29
SCFD1-220ENST00000556486 B2MP61769 119 aa7.02□□□□□ -1.29
SCFD1-220ENST00000556486 SNRPEP62304 92 aaKnown RBP7.02□□□□□ -1.29
SCFD1-220ENST00000556486 C6orf223Q8N319 242 aa7.02□□□□□ -1.29
SCFD1-220ENST00000556486 OR1B1Q8NGR6 318 aa7.02□□□□□ -1.29
SCFD1-220ENST00000556486 OR1S1Q8NH92 325 aa7.02□□□□□ -1.29
SCFD1-220ENST00000556486 MCUBQ9NWR8 336 aa7.02□□□□□ -1.29
SCFD1-220ENST00000556486 TMED3Q9Y3Q3 217 aa7.02□□□□□ -1.29
SCFD1-220ENST00000556486 NBDYA0A0U1RRE5 68 aa7.01□□□□□ -1.29
SCFD1-220ENST00000556486 CRXO43186 299 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-220ENST00000556486 MED6O75586 246 aa7.01□□□□□ -1.29
SCFD1-220ENST00000556486 FAUP35544 74 aaKnown RBP7.01□□□□□ -1.29
SCFD1-220ENST00000556486 DAD1P61803 113 aa7.01□□□□□ -1.29
SCFD1-220ENST00000556486 OR2F1Q13607 317 aa7.01□□□□□ -1.29
SCFD1-220ENST00000556486 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.01□□□□□ -1.29
SCFD1-220ENST00000556486 TMEM182Q6ZP80 229 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-220ENST00000556486 PPP1R14BQ96C90 147 aa7.01□□□□□ -1.29
SCFD1-220ENST00000556486 SLC25A21Q9BQT8 299 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-220ENST00000556486 TRAV8-2A0A0B4J237 113 aa7□□□□□ -1.29
SCFD1-220ENST00000556486 FABP12A6NFH5 140 aa7□□□□□ -1.29
SCFD1-220ENST00000556486 SYNGR2O43760 224 aa7□□□□□ -1.29
SCFD1-220ENST00000556486 DUSP14O95147 198 aaKnown RBP7□□□□□ -1.29
SCFD1-220ENST00000556486 INSP01308 110 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms