RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 UHRF2Q96PU4 802 aa3.07□□□□□ -1.92
ATXN3-240ENST00000556339 CHRDL1Q9BU40 450 aa3.07□□□□□ -1.92
ATXN3-240ENST00000556339 NDUFAF3Q9BU61 184 aa3.07□□□□□ -1.92
ATXN3-240ENST00000556339 MCRIP2Q9BUT9 160 aaKnown RBP3.07□□□□□ -1.92
ATXN3-240ENST00000556339 OR2D2Q9H210 308 aa3.07□□□□□ -1.92
ATXN3-240ENST00000556339 VSIRQ9H7M9 311 aa3.07□□□□□ -1.92
ATXN3-240ENST00000556339 LINC00574Q9H8X3 128 aa3.07□□□□□ -1.92
ATXN3-240ENST00000556339 TMEM167BQ9NRX6 74 aa3.07□□□□□ -1.92
ATXN3-240ENST00000556339 FKBP11Q9NYL4 201 aa3.07□□□□□ -1.92
ATXN3-240ENST00000556339 ZNF257Q9Y2Q1 563 aa3.07□□□□□ -1.92
ATXN3-240ENST00000556339 AMMECR1Q9Y4X0 333 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-240ENST00000556339 PXMP4Q9Y6I8 212 aa3.07□□□□□ -1.92
ATXN3-240ENST00000556339 RYR3Q15413 4870 aa3.07□□□□□ -1.92
ATXN3-240ENST00000556339 KBTBD11-OT1A0A1B0GTJ5 212 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 C15orf62A8K5M9 175 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 KRTAP9-6A8MVA2 160 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 OOSP1A8MZH6 123 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 C15orf65H3BRN8 121 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 BUB1B-PAK6H3BSN5 160 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 SLC31A2O15432 143 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 PAGE4O60829 102 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 S1PR2O95136 353 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 IGKV1D-33P01593 117 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 IGKV1-33P01594 117 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 RAB4AP20338 218 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 TNCP24821 2201 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 IL3RAP26951 378 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 OR10J1P30954 320 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 DUTP33316 252 aaKnown RBP3.06□□□□□ -1.92
ATXN3-240ENST00000556339 G6PCP35575 357 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 GPR12P47775 334 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 GNG10P50151 68 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 FGF8P55075 233 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-240ENST00000556339 TPPP2P59282 170 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 TAS2R45P59539 299 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 HSPE1P61604 102 aaKnown RBP3.06□□□□□ -1.92
ATXN3-240ENST00000556339 Q0VG73 95 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 GAMTQ14353 236 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 MORN2Q502X0 79 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 LDLRAD2Q5SZI1 272 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 C1orf194Q5T5A4 169 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 TPTE2P1Q5T6R2 138 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 FAM162BQ5T6X4 162 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 KPRPQ5T749 579 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-240ENST00000556339 TOMM20LQ6UXN7 152 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 PQLC2Q6ZP29 291 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 GBGT1Q8N5D6 347 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 RNF152Q8N8N0 203 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 WFDC9Q8NEX5 89 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 OR4P4Q8NGL7 312 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 OR10G8Q8NGN5 311 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 OR9G1Q8NH87 305 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 OR1L1Q8NH94 360 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 CACNG8Q8WXS5 425 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 LEAP2Q969E1 77 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 SMIM12Q96EX1 92 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 SFRP2Q96HF1 295 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 S1PR3Q99500 378 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 RASL11BQ9BPW5 248 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 GNB1LQ9BYB4 327 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 ENY2Q9NPA8 101 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 IDI2-AS1Q9NZ38 188 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 IL36BQ9NZH7 164 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 LINC00527Q9UJ94 153 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 PRNDQ9UKY0 176 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 FOXA2Q9Y261 457 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-240ENST00000556339 MOB4Q9Y3A3 225 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 LSM4Q9Y4Z0 139 aaKnown RBP3.06□□□□□ -1.92
ATXN3-240ENST00000556339 TRAPPC1Q9Y5R8 145 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 RFNGQ9Y644 331 aa3.06□□□□□ -1.92
ATXN3-240ENST00000556339 PRKDCP78527 4128 aaKnown RBP3.06□□□□□ -1.92
ATXN3-240ENST00000556339 IGLV5-52A0A0A0MRZ9 124 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 IGHV3-72A0A0B4J1Y9 119 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 TRAV39A0A0B4J263 110 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 IGHV4-28A0A0C4DH34 117 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 A0A1W2PPQ1 181 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 A0A1W2PRE2 83 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 WI2-2373I1.2A0A1W2PRP0 233 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 ZNF320A2RRD8 509 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 C15orf61A6NNL5 157 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 PRSS46E5RG02 174 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 J3QR06 171 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 K7EIL1 84 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 M0R143 59 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 RAMP3O60896 148 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 OR5G3P0C626 314 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 CGB3P0DN86 165 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 CGB7P0DN87 165 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 MYCNOSP40205 109 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 REG1BP48304 166 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 BRWD1-AS2P59051 145 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 GNB1P62873 340 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 RPL30P62888 115 aaKnown RBP3.05□□□□□ -1.92
ATXN3-240ENST00000556339 HLA-DRB5Q30154 266 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 OR10J3Q5JRS4 329 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 FAM71F2Q6NXP2 309 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 TEX38Q6PEX7 206 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 C10orf99Q6UWK7 81 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 SSX7Q7RTT5 188 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms